RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 AtmQ62388 3066 aa3.96□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Gm17416Q30KP4 66 aa3.96□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 FrylF8VQ05 3007 aa3.96□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Dchs2A0A0A6YW72 3346 aa3.95□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 A930033H14RikG5E8X6 103 aa3.95□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Pkd1l1Q8R526 2615 aa3.95□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Dmxl2Q8BPN8 3032 aa3.94□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Nbeal2Q6ZQA0 2742 aa3.94□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Utp20Q5XG71 2788 aaKnown RBP3.93□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Stab2Q8R4U0 2559 aa3.93□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Brca2P97929 3329 aa3.93□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Muc5acE9QAQ8 3455 aa3.93□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Igfn1Q3KNY0 2849 aa3.93□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Cfap54Q8C6S9 3106 aa3.93□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 BptfA2A654 3036 aaKnown RBP3.91□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Ranbp2Q9ERU9 3053 aaKnown RBP3.89□□□□□ -1.79
Pcdh9-204ENSMUST00000193901 SpenQ62504 3644 aaKnown RBP3.89□□□□□ -1.79
Pcdh9-204ENSMUST00000193901 Frem2Q6NVD0 3160 aa3.87□□□□□ -1.79
Pcdh9-204ENSMUST00000193901 VcanQ62059 3357 aa3.87□□□□□ -1.79
Pcdh9-204ENSMUST00000193901 Gm9507D3Z5T3 223 aa3.86□□□□□ -1.79
Pcdh9-204ENSMUST00000193901 Celsr1O35161 3034 aa3.86□□□□□ -1.79
Pcdh9-204ENSMUST00000193901 Lama1P19137 3084 aa3.85□□□□□ -1.79
Pcdh9-204ENSMUST00000193901 A030003K21RikA0A1Y7VIM3 128 aa3.84□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 FcgbpE9Q0B5 2583 aa3.83□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Akap9Q70FJ1 3797 aa3.83□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 2210017I01RikA0A0A6YVV1 95 aa3.83□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Krtap10-4Q08EG8 221 aa3.82□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Tenm3Q9WTS6 2715 aa3.81□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Gm884A2A9H6 3643 aa3.81□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Adgrg4B7ZCC9 3073 aa3.81□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Krtap10-10A0A1W2P7T6 217 aa3.81□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Gm19668J3QMD1 248 aa3.8□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Zzef1Q5SSH7 2924 aa3.79□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Tex15F8VPN2 2785 aa3.79□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 2310079G19RikQ9D6L6 185 aa3.78□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Col6a3E9PWQ3 3284 aa3.78□□□□□ -1.8
Pcdh9-204ENSMUST00000193901 Gm9918Q8BUR5 174 aa3.77□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 SpegQ62407 3262 aa3.77□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 Trank1Q8BV79 2999 aa3.76□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 Vps13cQ8BX70 3748 aa3.75□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 Srrm2Q8BTI8 2703 aaKnown RBP3.75□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 LrbaQ9ESE1 2856 aa3.73□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 Celsr2Q9R0M0 2920 aa3.72□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 Nf1Q04690 2841 aa3.72□□□□□ -1.81
Pcdh9-204ENSMUST00000193901 Zfhx4Q9JJN2 3550 aa3.7□□□□□ -1.82
Pcdh9-204ENSMUST00000193901 Chd9Q8BYH8 2885 aa3.69□□□□□ -1.82
Pcdh9-204ENSMUST00000193901 Celsr3Q91ZI0 3301 aa3.68□□□□□ -1.82
Pcdh9-204ENSMUST00000193901 Gm2696A0A1W2P709 240 aa3.67□□□□□ -1.82
Pcdh9-204ENSMUST00000193901 Pdzd2E9Q1M1 2796 aa3.67□□□□□ -1.82
Pcdh9-204ENSMUST00000193901 ApcQ61315 2845 aa3.63□□□□□ -1.83
Pcdh9-204ENSMUST00000193901 Dchs1E9PVD3 3291 aa3.62□□□□□ -1.83
Pcdh9-204ENSMUST00000193901 Megf8P60882 2789 aa3.61□□□□□ -1.83
Pcdh9-204ENSMUST00000193901 TgO08710 2766 aa3.59□□□□□ -1.83
Pcdh9-204ENSMUST00000193901 Gm6217A0A1Y7VJK9 128 aa3.58□□□□□ -1.84
Pcdh9-204ENSMUST00000193901 RelnQ60841 3461 aa3.57□□□□□ -1.84
Pcdh9-204ENSMUST00000193901 Tenm1Q9WTS4 2731 aa3.55□□□□□ -1.84
Pcdh9-204ENSMUST00000193901 Cmya5Q70KF4 3739 aa3.55□□□□□ -1.84
Pcdh9-204ENSMUST00000193901 Lama5Q61001 3718 aa3.52□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Csmd1Q923L3 3564 aa3.52□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 OtogO55225 2910 aa3.52□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Krtap13-1Q8K198 168 aa3.51□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 LystP97412 3788 aa3.51□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Helz2E9QAM5 2947 aaKnown RBP3.51□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Gm18596A0A1W2P860 280 aa3.51□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Smg1Q8BKX6 3658 aaKnown RBP3.5□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Fbn1Q61554 2873 aaKnown RBP3.5□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Gm6358A0A087WPH4 74 aa3.48□□□□□ -1.85
Pcdh9-204ENSMUST00000193901 Svep1A2AVA0 3567 aa3.46□□□□□ -1.86
Pcdh9-204ENSMUST00000193901 Gm19402J3QJV4 266 aa3.45□□□□□ -1.86
Pcdh9-204ENSMUST00000193901 Tenm2Q9WTS5 2764 aa3.45□□□□□ -1.86
Pcdh9-204ENSMUST00000193901 Muc4Q8JZM8 3443 aa3.41□□□□□ -1.86
Pcdh9-204ENSMUST00000193901 Gm9736A0A1W2P7N1 277 aa3.36□□□□□ -1.87
Pcdh9-204ENSMUST00000193901 A0A1Y7VJH8 109 aa3.36□□□□□ -1.87
Pcdh9-204ENSMUST00000193901 Ank2Q8C8R3 3898 aa3.36□□□□□ -1.87
Pcdh9-204ENSMUST00000193901 Krtap7-1Q9D3I6 87 aa3.36□□□□□ -1.87
Pcdh9-204ENSMUST00000193901 Hspg2Q05793 3707 aaKnown RBP3.34□□□□□ -1.87
Pcdh9-204ENSMUST00000193901 Krtap3-1A2A591 98 aa3.34□□□□□ -1.87
Pcdh9-204ENSMUST00000193901 VwfQ8CIZ8 2813 aa3.34□□□□□ -1.88
Pcdh9-204ENSMUST00000193901 Krtap8-1O08633 61 aa3.33□□□□□ -1.88
Pcdh9-204ENSMUST00000193901 Krtap28-10A0A1Y7VP58 119 aa3.32□□□□□ -1.88
Pcdh9-204ENSMUST00000193901 Gm11939A2A592 99 aa3.31□□□□□ -1.88
Pcdh9-204ENSMUST00000193901 Sprr2kO70562 68 aa3.3□□□□□ -1.88
Pcdh9-204ENSMUST00000193901 Col7a1Q63870 2944 aa3.3□□□□□ -1.88
Pcdh9-204ENSMUST00000193901 Muc6Q80T03 2850 aa3.3□□□□□ -1.88
Pcdh9-204ENSMUST00000193901 CubnQ9JLB4 3623 aa3.27□□□□□ -1.89
Pcdh9-204ENSMUST00000193901 Csmd3Q80T79 3707 aa3.24□□□□□ -1.89
Pcdh9-204ENSMUST00000193901 A030005K14RikA0A1Y7VNY1 122 aa3.23□□□□□ -1.89
Pcdh9-204ENSMUST00000193901 Gm10318A0A1W2P728 225 aa3.23□□□□□ -1.89
Pcdh9-204ENSMUST00000193901 Xirp2Q4U4S6 3784 aa3.23□□□□□ -1.89
Pcdh9-204ENSMUST00000193901 Krtap19-9bQ99NG9 58 aa3.22□□□□□ -1.89
Pcdh9-204ENSMUST00000193901 Krtap19-5O08632 62 aa3.21□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 Sprr2gO70558 76 aa3.21□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 Sprr2a3Q4KL71 83 aa3.2□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 Sprr2a1Q9CQK8 83 aa3.2□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 Krtap19-9aF8WH65 55 aa3.19□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 BsnO88737 3942 aa3.19□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 Gm7544A0A1Y7VJ58 118 aa3.18□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 Crct1Q6PAI5 102 aa3.17□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 A030005L19RikA0A1Y7VIU2 113 aa3.16□□□□□ -1.9
Pcdh9-204ENSMUST00000193901 Krtap28-13A0A087WQP5 138 aa3.15□□□□□ -1.91
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms