RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 A730071L15RikQ8C4X0 137 aa6.58□□□□□ -1.36
Msh3-202ENSMUST00000185852 Gm10160F6Y577 67 aa6.57□□□□□ -1.36
Msh3-202ENSMUST00000185852 Sec61gP60060 68 aa6.57□□□□□ -1.36
Msh3-202ENSMUST00000185852 Krtap14O08640 167 aa6.52□□□□□ -1.37
Msh3-202ENSMUST00000185852 Gm10139O88245 57 aa6.51□□□□□ -1.37
Msh3-202ENSMUST00000185852 Odf3bQ5M8M2 238 aa6.51□□□□□ -1.37
Msh3-202ENSMUST00000185852 Csmd3Q80T79 3707 aa6.51□□□□□ -1.37
Msh3-202ENSMUST00000185852 Cypt14J3QPF7 87 aa6.48□□□□□ -1.37
Msh3-202ENSMUST00000185852 Sox16Q62247 57 aa6.48□□□□□ -1.37
Msh3-202ENSMUST00000185852 Chtf8P0CG14 533 aa6.47□□□□□ -1.37
Msh3-202ENSMUST00000185852 Krtap29-1A2A5X4 342 aa6.45□□□□□ -1.38
Msh3-202ENSMUST00000185852 Dnah10D3YYQ8 4591 aa6.44□□□□□ -1.38
Msh3-202ENSMUST00000185852 Cdc42se1Q8BHL7 80 aa6.44□□□□□ -1.38
Msh3-202ENSMUST00000185852 Coa5Q99M07 74 aa6.43□□□□□ -1.38
Msh3-202ENSMUST00000185852 Dnah14A0A140LIJ4 4489 aa6.42□□□□□ -1.38
Msh3-202ENSMUST00000185852 Gm20661K7N787 53 aa6.37□□□□□ -1.39
Msh3-202ENSMUST00000185852 Krtap15-1Q9QZU5 150 aa6.37□□□□□ -1.39
Msh3-202ENSMUST00000185852 Gm26620Q9CY65 116 aa6.35□□□□□ -1.39
Msh3-202ENSMUST00000185852 Ndufb1P0DN34 57 aa6.32□□□□□ -1.4
Msh3-202ENSMUST00000185852 2310034C09RikQ9D746 214 aa6.32□□□□□ -1.4
Msh3-202ENSMUST00000185852 Gm16253D3Z167 63 aa6.31□□□□□ -1.4
Msh3-202ENSMUST00000185852 4930507D05RikQ8C9C9 103 aa6.31□□□□□ -1.4
Msh3-202ENSMUST00000185852 Gm17606F6ZL36 78 aa6.3□□□□□ -1.4
Msh3-202ENSMUST00000185852 Tnp2P11378 117 aa6.28□□□□□ -1.4
Msh3-202ENSMUST00000185852 Phxr4P15974 95 aa6.28□□□□□ -1.4
Msh3-202ENSMUST00000185852 Gm21798J3QNU5 87 aa6.27□□□□□ -1.41
Msh3-202ENSMUST00000185852 Gm9918Q8BUR5 174 aa6.27□□□□□ -1.41
Msh3-202ENSMUST00000185852 Rnase13Q5GAM7 153 aa6.25□□□□□ -1.41
Msh3-202ENSMUST00000185852 Gm4491E0CX42 125 aa6.21□□□□□ -1.42
Msh3-202ENSMUST00000185852 Gm9821Q8K076 103 aa6.19□□□□□ -1.42
Msh3-202ENSMUST00000185852 Gm37013Q8K491 104 aa6.19□□□□□ -1.42
Msh3-202ENSMUST00000185852 4933415A04RikQ9D443 101 aa6.16□□□□□ -1.42
Msh3-202ENSMUST00000185852 Gm5965D3Z724 196 aa6.13□□□□□ -1.43
Msh3-202ENSMUST00000185852 Gm9736A0A1W2P7N1 277 aa6.12□□□□□ -1.43
Msh3-202ENSMUST00000185852 Gm10643Q3URG9 111 aa6.1□□□□□ -1.43
Msh3-202ENSMUST00000185852 Dnah7bL7N1Y0 4068 aa6.07□□□□□ -1.44
Msh3-202ENSMUST00000185852 Huwe1Q7TMY8 4377 aaKnown RBP6.06□□□□□ -1.44
Msh3-202ENSMUST00000185852 Gm5767A0A0J9YTU8 78 aa6.06□□□□□ -1.44
Msh3-202ENSMUST00000185852 Limd2Q8BGB5 128 aa6.06□□□□□ -1.44
Msh3-202ENSMUST00000185852 Gm3646F6S692 53 aa6.06□□□□□ -1.44
Msh3-202ENSMUST00000185852 Ryr1E9PZQ0 5035 aa6.05□□□□□ -1.44
Msh3-202ENSMUST00000185852 1700042G07RikB1AUF7 90 aa6.05□□□□□ -1.44
Msh3-202ENSMUST00000185852 Gm2310J3QNJ2 377 aa6.05□□□□□ -1.44
Msh3-202ENSMUST00000185852 TnxbO35452 4006 aa6.03□□□□□ -1.44
Msh3-202ENSMUST00000185852 2310057N15RikQ9D6T8 200 aa6.01□□□□□ -1.45
Msh3-202ENSMUST00000185852 Uqcr11Q9CPX8 56 aa5.97□□□□□ -1.45
Msh3-202ENSMUST00000185852 PlecQ9QXS1 4691 aaKnown RBP5.94□□□□□ -1.46
Msh3-202ENSMUST00000185852 Gm3880A0A1B0GSB3 72 aa5.93□□□□□ -1.46
Msh3-202ENSMUST00000185852 Spink7Q6IE32 76 aa5.93□□□□□ -1.46
Msh3-202ENSMUST00000185852 Gm12216A0A1W2P827 62 aa5.93□□□□□ -1.46
Msh3-202ENSMUST00000185852 Ryr3A2AGL3 4863 aa5.91□□□□□ -1.46
Msh3-202ENSMUST00000185852 Dnah5Q8VHE6 4621 aa5.89□□□□□ -1.47
Msh3-202ENSMUST00000185852 Fras1Q80T14 4010 aa5.86□□□□□ -1.47
Msh3-202ENSMUST00000185852 CriptO70333 101 aa5.86□□□□□ -1.47
Msh3-202ENSMUST00000185852 Kmt2aP55200 3966 aa5.85□□□□□ -1.47
Msh3-202ENSMUST00000185852 Stard9Q80TF6 4561 aa5.85□□□□□ -1.47
Msh3-202ENSMUST00000185852 Dnah11E9Q7N9 4488 aa5.85□□□□□ -1.47
Msh3-202ENSMUST00000185852 PrkdcP97313 4128 aa5.84□□□□□ -1.47
Msh3-202ENSMUST00000185852 Sec61bQ9CQS8 96 aaKnown RBP5.84□□□□□ -1.47
Msh3-202ENSMUST00000185852 Gm10318A0A1W2P728 225 aa5.83□□□□□ -1.48
Msh3-202ENSMUST00000185852 Dnah9B1AR51 4484 aa5.82□□□□□ -1.48
Msh3-202ENSMUST00000185852 Fam229aB2KGE5 128 aa5.81□□□□□ -1.48
Msh3-202ENSMUST00000185852 HydinQ80W93 5154 aa5.79□□□□□ -1.48
Msh3-202ENSMUST00000185852 Krtap19-5O08632 62 aa5.79□□□□□ -1.48
Msh3-202ENSMUST00000185852 Gm10382Q3V0T5 144 aa5.77□□□□□ -1.49
Msh3-202ENSMUST00000185852 Dnah17Q69Z23 4481 aa5.77□□□□□ -1.49
Msh3-202ENSMUST00000185852 Rpl37Q9D823 97 aa5.75□□□□□ -1.49
Msh3-202ENSMUST00000185852 D6Ertd527eA0A0N4SWI3 464 aa5.75□□□□□ -1.49
Msh3-202ENSMUST00000185852 Dnah6E9Q0B6 4144 aa5.75□□□□□ -1.49
Msh3-202ENSMUST00000185852 Rps29P62274 56 aa5.74□□□□□ -1.49
Msh3-202ENSMUST00000185852 Crct1Q6PAI5 102 aa5.72□□□□□ -1.49
Msh3-202ENSMUST00000185852 Vps13dB1ART2 4390 aa5.72□□□□□ -1.49
Msh3-202ENSMUST00000185852 Mycbp2Q7TPH6 4711 aa5.72□□□□□ -1.49
Msh3-202ENSMUST00000185852 Gm9955Q8CEJ8 102 aa5.7□□□□□ -1.5
Msh3-202ENSMUST00000185852 Cox6b2Q80ZN9 88 aa5.68□□□□□ -1.5
Msh3-202ENSMUST00000185852 Gm19426M0QWC7 77 aa5.67□□□□□ -1.5
Msh3-202ENSMUST00000185852 Lrp1Q91ZX7 4545 aaKnown RBP5.66□□□□□ -1.5
Msh3-202ENSMUST00000185852 Lrp1bQ9JI18 4599 aa5.66□□□□□ -1.5
Msh3-202ENSMUST00000185852 Fat3Q8BNA6 4555 aa5.66□□□□□ -1.5
Msh3-202ENSMUST00000185852 BC029722A0A0N4SW31 51 aa5.63□□□□□ -1.51
Msh3-202ENSMUST00000185852 Kiaa1109A2AAE1 5005 aa5.63□□□□□ -1.51
Msh3-202ENSMUST00000185852 Mp68P56379 58 aa5.61□□□□□ -1.51
Msh3-202ENSMUST00000185852 Gm11939A2A592 99 aa5.61□□□□□ -1.51
Msh3-202ENSMUST00000185852 A930033H14RikG5E8X6 103 aa5.59□□□□□ -1.52
Msh3-202ENSMUST00000185852 ApobE9Q414 4505 aa5.58□□□□□ -1.52
Msh3-202ENSMUST00000185852 Dnah1E9Q8T7 4250 aa5.56□□□□□ -1.52
Msh3-202ENSMUST00000185852 Herc2Q4U2R1 4836 aa5.55□□□□□ -1.52
Msh3-202ENSMUST00000185852 Lrp2A2ARV4 4660 aa5.54□□□□□ -1.52
Msh3-202ENSMUST00000185852 Dync1h1Q9JHU4 4644 aaKnown RBP5.54□□□□□ -1.52
Msh3-202ENSMUST00000185852 Pla2g10Q9QXX3 151 aa5.53□□□□□ -1.52
Msh3-202ENSMUST00000185852 2310079G19RikQ9D6L6 185 aa5.53□□□□□ -1.52
Msh3-202ENSMUST00000185852 Dync2h1Q45VK7 4306 aa5.51□□□□□ -1.53
Msh3-202ENSMUST00000185852 Dnah7cA0A087WR13 4024 aa5.51□□□□□ -1.53
Msh3-202ENSMUST00000185852 Gm20538F6Z9R1 75 aa5.47□□□□□ -1.53
Msh3-202ENSMUST00000185852 Dnah7aE9Q0T8 4024 aa5.47□□□□□ -1.53
Msh3-202ENSMUST00000185852 Dnah3Q8BW94 4083 aa5.46□□□□□ -1.54
Msh3-202ENSMUST00000185852 Dnah2P0C6F1 4456 aa5.45□□□□□ -1.54
Msh3-202ENSMUST00000185852 SacsQ9JLC8 4582 aa5.45□□□□□ -1.54
Msh3-202ENSMUST00000185852 Camk2n1Q6QWF9 78 aa5.45□□□□□ -1.54
Msh3-202ENSMUST00000185852 Fat1A0A1L1SQU7 4645 aa5.44□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 98.9 ms