RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Lrrc37aB1AWG4 3215 aa7.05□□□□□ -1.28
Gm28043-201ENSMUST00000130871 Pdzd2E9Q1M1 2796 aa7.05□□□□□ -1.28
Gm28043-201ENSMUST00000130871 Adgrg4B7ZCC9 3073 aa7.05□□□□□ -1.28
Gm28043-201ENSMUST00000130871 NbeaQ9EPN1 2936 aa7.04□□□□□ -1.28
Gm28043-201ENSMUST00000130871 Tenm4Q3UHK6 2771 aa7.01□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Lama1P19137 3084 aa7□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Ndufaf8A2AMZ4 74 aa7□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Gm21887J3QQ04 176 aa6.99□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Gm2696A0A1W2P709 240 aa6.98□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Chd9Q8BYH8 2885 aa6.98□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Dmxl2Q8BPN8 3032 aa6.98□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Celsr3Q91ZI0 3301 aa6.97□□□□□ -1.29
Gm28043-201ENSMUST00000130871 Trank1Q8BV79 2999 aa6.94□□□□□ -1.3
Gm28043-201ENSMUST00000130871 Nf1Q04690 2841 aa6.93□□□□□ -1.3
Gm28043-201ENSMUST00000130871 Szt2A2A9C3 3431 aa6.93□□□□□ -1.3
Gm28043-201ENSMUST00000130871 Col6a3E9PWQ3 3284 aa6.92□□□□□ -1.3
Gm28043-201ENSMUST00000130871 Gm5965D3Z724 196 aa6.91□□□□□ -1.3
Gm28043-201ENSMUST00000130871 Tenm1Q9WTS4 2731 aa6.89□□□□□ -1.31
Gm28043-201ENSMUST00000130871 Dchs2A0A0A6YW72 3346 aa6.86□□□□□ -1.31
Gm28043-201ENSMUST00000130871 LrbaQ9ESE1 2856 aa6.86□□□□□ -1.31
Gm28043-201ENSMUST00000130871 Tnp1P10856 55 aa6.85□□□□□ -1.31
Gm28043-201ENSMUST00000130871 Brca2P97929 3329 aa6.85□□□□□ -1.31
Gm28043-201ENSMUST00000130871 Gm40193A0A1B0GT39 78 aa6.83□□□□□ -1.32
Gm28043-201ENSMUST00000130871 2310057N15RikQ9D6T8 200 aa6.8□□□□□ -1.32
Gm28043-201ENSMUST00000130871 Tenm3Q9WTS6 2715 aa6.79□□□□□ -1.32
Gm28043-201ENSMUST00000130871 Gm9112A2AI92 75 aa6.79□□□□□ -1.32
Gm28043-201ENSMUST00000130871 Gm20537G3UYK7 97 aa6.76□□□□□ -1.33
Gm28043-201ENSMUST00000130871 Helz2E9QAM5 2947 aaKnown RBP6.74□□□□□ -1.33
Gm28043-201ENSMUST00000130871 VcanQ62059 3357 aa6.7□□□□□ -1.34
Gm28043-201ENSMUST00000130871 Megf8P60882 2789 aa6.69□□□□□ -1.34
Gm28043-201ENSMUST00000130871 A930033H14RikG5E8X6 103 aa6.66□□□□□ -1.34
Gm28043-201ENSMUST00000130871 B930094E09RikQ8C4T2 136 aa6.65□□□□□ -1.34
Gm28043-201ENSMUST00000130871 Dchs1E9PVD3 3291 aa6.65□□□□□ -1.34
Gm28043-201ENSMUST00000130871 SpegQ62407 3262 aa6.63□□□□□ -1.35
Gm28043-201ENSMUST00000130871 Tenm2Q9WTS5 2764 aa6.62□□□□□ -1.35
Gm28043-201ENSMUST00000130871 2310079G19RikQ9D6L6 185 aa6.6□□□□□ -1.35
Gm28043-201ENSMUST00000130871 Gm17416Q30KP4 66 aa6.54□□□□□ -1.36
Gm28043-201ENSMUST00000130871 Myo15aQ9QZZ4 3511 aa6.5□□□□□ -1.37
Gm28043-201ENSMUST00000130871 2210017I01RikA0A0A6YVV1 95 aa6.42□□□□□ -1.38
Gm28043-201ENSMUST00000130871 VwfQ8CIZ8 2813 aa6.39□□□□□ -1.39
Gm28043-201ENSMUST00000130871 RelnQ60841 3461 aa6.37□□□□□ -1.39
Gm28043-201ENSMUST00000130871 Wdfy3Q6VNB8 3508 aa6.37□□□□□ -1.39
Gm28043-201ENSMUST00000130871 Gm9736A0A1W2P7N1 277 aa6.36□□□□□ -1.39
Gm28043-201ENSMUST00000130871 Gm17402F6Z0L5 76 aa6.36□□□□□ -1.39
Gm28043-201ENSMUST00000130871 OtogO55225 2910 aa6.31□□□□□ -1.4
Gm28043-201ENSMUST00000130871 Muc5acE9QAQ8 3455 aa6.31□□□□□ -1.4
Gm28043-201ENSMUST00000130871 Prm2P07978 107 aa6.27□□□□□ -1.41
Gm28043-201ENSMUST00000130871 Zfhx3Q61329 3726 aa6.25□□□□□ -1.41
Gm28043-201ENSMUST00000130871 Gm9918Q8BUR5 174 aa6.24□□□□□ -1.41
Gm28043-201ENSMUST00000130871 Gm11939A2A592 99 aa6.16□□□□□ -1.42
Gm28043-201ENSMUST00000130871 Akap9Q70FJ1 3797 aa6.12□□□□□ -1.43
Gm28043-201ENSMUST00000130871 Gm19668J3QMD1 248 aa6.11□□□□□ -1.43
Gm28043-201ENSMUST00000130871 Col7a1Q63870 2944 aa6.07□□□□□ -1.44
Gm28043-201ENSMUST00000130871 Krtap13-1Q8K198 168 aa6.04□□□□□ -1.44
Gm28043-201ENSMUST00000130871 Gm10318A0A1W2P728 225 aa6.04□□□□□ -1.44
Gm28043-201ENSMUST00000130871 4933428G20RikQ9D3X4 101 aa6.03□□□□□ -1.44
Gm28043-201ENSMUST00000130871 DmdP11531 3678 aa6.03□□□□□ -1.44
Gm28043-201ENSMUST00000130871 Krtap19-5O08632 62 aa6.01□□□□□ -1.45
Gm28043-201ENSMUST00000130871 Csmd1Q923L3 3564 aa5.96□□□□□ -1.45
Gm28043-201ENSMUST00000130871 Fbn1Q61554 2873 aaKnown RBP5.96□□□□□ -1.46
Gm28043-201ENSMUST00000130871 Krtap3-2Q9D638 99 aa5.94□□□□□ -1.46
Gm28043-201ENSMUST00000130871 Krtap3-3Q9D7P0 99 aa5.94□□□□□ -1.46
Gm28043-201ENSMUST00000130871 Crct1Q6PAI5 102 aa5.92□□□□□ -1.46
Gm28043-201ENSMUST00000130871 SpenQ62504 3644 aaKnown RBP5.92□□□□□ -1.46
Gm28043-201ENSMUST00000130871 Krtap3-1A2A591 98 aa5.91□□□□□ -1.46
Gm28043-201ENSMUST00000130871 Smg1Q8BKX6 3658 aaKnown RBP5.9□□□□□ -1.47
Gm28043-201ENSMUST00000130871 Vps13cQ8BX70 3748 aa5.87□□□□□ -1.47
Gm28043-201ENSMUST00000130871 Muc6Q80T03 2850 aa5.84□□□□□ -1.48
Gm28043-201ENSMUST00000130871 Zfhx4Q9JJN2 3550 aa5.77□□□□□ -1.49
Gm28043-201ENSMUST00000130871 Lama5Q61001 3718 aa5.76□□□□□ -1.49
Gm28043-201ENSMUST00000130871 Muc4Q8JZM8 3443 aa5.72□□□□□ -1.49
Gm28043-201ENSMUST00000130871 Svep1A2AVA0 3567 aa5.59□□□□□ -1.51
Gm28043-201ENSMUST00000130871 Gm6358A0A087WPH4 74 aa5.55□□□□□ -1.52
Gm28043-201ENSMUST00000130871 Gm884A2A9H6 3643 aa5.52□□□□□ -1.53
Gm28043-201ENSMUST00000130871 Cmya5Q70KF4 3739 aa5.52□□□□□ -1.53
Gm28043-201ENSMUST00000130871 Sprr2a3Q4KL71 83 aa5.51□□□□□ -1.53
Gm28043-201ENSMUST00000130871 Sprr2a1Q9CQK8 83 aa5.51□□□□□ -1.53
Gm28043-201ENSMUST00000130871 Krtap1-5A2A590 122 aa5.5□□□□□ -1.53
Gm28043-201ENSMUST00000130871 Krtap19-9aF8WH65 55 aa5.45□□□□□ -1.54
Gm28043-201ENSMUST00000130871 Csmd2V9GX34 3611 aa5.44□□□□□ -1.54
Gm28043-201ENSMUST00000130871 Krtap7-1Q9D3I6 87 aa5.43□□□□□ -1.54
Gm28043-201ENSMUST00000130871 Krtap8-1O08633 61 aa5.38□□□□□ -1.55
Gm28043-201ENSMUST00000130871 Ank2Q8C8R3 3898 aa5.38□□□□□ -1.55
Gm28043-201ENSMUST00000130871 Krtap1-4Q3V2D6 188 aa5.36□□□□□ -1.55
Gm28043-201ENSMUST00000130871 LystP97412 3788 aa5.34□□□□□ -1.55
Gm28043-201ENSMUST00000130871 CubnQ9JLB4 3623 aa5.32□□□□□ -1.56
Gm28043-201ENSMUST00000130871 Krtap19-9bQ99NG9 58 aa5.32□□□□□ -1.56
Gm28043-201ENSMUST00000130871 LorP18165 486 aa5.29□□□□□ -1.56
Gm28043-201ENSMUST00000130871 Dnah14A0A140LIJ4 4489 aa5.27□□□□□ -1.57
Gm28043-201ENSMUST00000130871 Dnah5Q8VHE6 4621 aa5.25□□□□□ -1.57
Gm28043-201ENSMUST00000130871 Dnah10D3YYQ8 4591 aa5.24□□□□□ -1.57
Gm28043-201ENSMUST00000130871 Stard9Q80TF6 4561 aa5.23□□□□□ -1.57
Gm28043-201ENSMUST00000130871 Sprr2kO70562 68 aa5.21□□□□□ -1.58
Gm28043-201ENSMUST00000130871 Krtap12-1Q9Z287 130 aa5.21□□□□□ -1.58
Gm28043-201ENSMUST00000130871 Gm18596A0A1W2P860 280 aa5.2□□□□□ -1.58
Gm28043-201ENSMUST00000130871 Gm19402J3QJV4 266 aa5.19□□□□□ -1.58
Gm28043-201ENSMUST00000130871 Huwe1Q7TMY8 4377 aaKnown RBP5.16□□□□□ -1.58
Gm28043-201ENSMUST00000130871 Vps13dB1ART2 4390 aa5.11□□□□□ -1.59
Gm28043-201ENSMUST00000130871 PlecQ9QXS1 4691 aaKnown RBP5.1□□□□□ -1.59
Gm28043-201ENSMUST00000130871 Csmd3Q80T79 3707 aa4.99□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms