RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Brca2P97929 3329 aa6.06□□□□□ -1.44
Col6a4-201ENSMUST00000121963 Muc2Q80Z19 2680 aa6.06□□□□□ -1.44
Col6a4-201ENSMUST00000121963 DspE9Q557 2883 aaKnown RBP6.04□□□□□ -1.44
Col6a4-201ENSMUST00000121963 Vps13cQ8BX70 3748 aa6.03□□□□□ -1.44
Col6a4-201ENSMUST00000121963 Tnp1P10856 55 aa6.02□□□□□ -1.44
Col6a4-201ENSMUST00000121963 Gm3646F6S692 53 aa6.02□□□□□ -1.45
Col6a4-201ENSMUST00000121963 Dchs2A0A0A6YW72 3346 aa6.02□□□□□ -1.45
Col6a4-201ENSMUST00000121963 SpegQ62407 3262 aa6.02□□□□□ -1.45
Col6a4-201ENSMUST00000121963 Chd7A2AJK6 2986 aaKnown RBP6.01□□□□□ -1.45
Col6a4-201ENSMUST00000121963 A730071L15RikQ8C4X0 137 aa6.01□□□□□ -1.45
Col6a4-201ENSMUST00000121963 FrylF8VQ05 3007 aa6.01□□□□□ -1.45
Col6a4-201ENSMUST00000121963 Cox6b2Q80ZN9 88 aa6.01□□□□□ -1.45
Col6a4-201ENSMUST00000121963 Dchs1E9PVD3 3291 aa6□□□□□ -1.45
Col6a4-201ENSMUST00000121963 Wdfy3Q6VNB8 3508 aa5.97□□□□□ -1.45
Col6a4-201ENSMUST00000121963 Srrm2Q8BTI8 2703 aaKnown RBP5.97□□□□□ -1.45
Col6a4-201ENSMUST00000121963 Akap9Q70FJ1 3797 aa5.95□□□□□ -1.46
Col6a4-201ENSMUST00000121963 Hivep1Q03172 2688 aa5.94□□□□□ -1.46
Col6a4-201ENSMUST00000121963 Zzef1Q5SSH7 2924 aa5.94□□□□□ -1.46
Col6a4-201ENSMUST00000121963 Gm9918Q8BUR5 174 aa5.92□□□□□ -1.46
Col6a4-201ENSMUST00000121963 Tenm1Q9WTS4 2731 aa5.91□□□□□ -1.46
Col6a4-201ENSMUST00000121963 Cystm1Q8K353 104 aa5.91□□□□□ -1.46
Col6a4-201ENSMUST00000121963 Adgrg4B7ZCC9 3073 aa5.89□□□□□ -1.47
Col6a4-201ENSMUST00000121963 Smg1Q8BKX6 3658 aaKnown RBP5.88□□□□□ -1.47
Col6a4-201ENSMUST00000121963 1700042G07RikB1AUF7 90 aa5.82□□□□□ -1.48
Col6a4-201ENSMUST00000121963 LrbaQ9ESE1 2856 aa5.81□□□□□ -1.48
Col6a4-201ENSMUST00000121963 4933415A04RikQ9D443 101 aa5.81□□□□□ -1.48
Col6a4-201ENSMUST00000121963 Tenm4Q3UHK6 2771 aa5.81□□□□□ -1.48
Col6a4-201ENSMUST00000121963 NbeaQ9EPN1 2936 aa5.8□□□□□ -1.48
Col6a4-201ENSMUST00000121963 Nf1Q04690 2841 aa5.8□□□□□ -1.48
Col6a4-201ENSMUST00000121963 Csmd1Q923L3 3564 aa5.8□□□□□ -1.48
Col6a4-201ENSMUST00000121963 Gm10318A0A1W2P728 225 aa5.77□□□□□ -1.49
Col6a4-201ENSMUST00000121963 Pdzd2E9Q1M1 2796 aa5.77□□□□□ -1.49
Col6a4-201ENSMUST00000121963 Zfhx4Q9JJN2 3550 aa5.74□□□□□ -1.49
Col6a4-201ENSMUST00000121963 DmdP11531 3678 aa5.74□□□□□ -1.49
Col6a4-201ENSMUST00000121963 Celsr2Q9R0M0 2920 aa5.74□□□□□ -1.49
Col6a4-201ENSMUST00000121963 Ndufaf8A2AMZ4 74 aa5.74□□□□□ -1.49
Col6a4-201ENSMUST00000121963 Gm9736A0A1W2P7N1 277 aa5.74□□□□□ -1.49
Col6a4-201ENSMUST00000121963 Prm2P07978 107 aa5.74□□□□□ -1.49
Col6a4-201ENSMUST00000121963 SpenQ62504 3644 aaKnown RBP5.69□□□□□ -1.5
Col6a4-201ENSMUST00000121963 RelnQ60841 3461 aa5.69□□□□□ -1.5
Col6a4-201ENSMUST00000121963 4933428G20RikQ9D3X4 101 aa5.68□□□□□ -1.5
Col6a4-201ENSMUST00000121963 Gm9112A2AI92 75 aa5.65□□□□□ -1.5
Col6a4-201ENSMUST00000121963 Cmya5Q70KF4 3739 aa5.65□□□□□ -1.51
Col6a4-201ENSMUST00000121963 TgO08710 2766 aa5.65□□□□□ -1.51
Col6a4-201ENSMUST00000121963 Gm40193A0A1B0GT39 78 aa5.56□□□□□ -1.52
Col6a4-201ENSMUST00000121963 B930094E09RikQ8C4T2 136 aa5.55□□□□□ -1.52
Col6a4-201ENSMUST00000121963 Gm884A2A9H6 3643 aa5.55□□□□□ -1.52
Col6a4-201ENSMUST00000121963 Csmd2V9GX34 3611 aa5.54□□□□□ -1.52
Col6a4-201ENSMUST00000121963 Megf8P60882 2789 aa5.54□□□□□ -1.52
Col6a4-201ENSMUST00000121963 VwfQ8CIZ8 2813 aa5.53□□□□□ -1.52
Col6a4-201ENSMUST00000121963 Tenm3Q9WTS6 2715 aa5.52□□□□□ -1.53
Col6a4-201ENSMUST00000121963 Crct1Q6PAI5 102 aa5.52□□□□□ -1.53
Col6a4-201ENSMUST00000121963 Lama5Q61001 3718 aa5.5□□□□□ -1.53
Col6a4-201ENSMUST00000121963 Muc5acE9QAQ8 3455 aa5.48□□□□□ -1.53
Col6a4-201ENSMUST00000121963 Tenm2Q9WTS5 2764 aa5.47□□□□□ -1.53
Col6a4-201ENSMUST00000121963 OtogO55225 2910 aa5.45□□□□□ -1.54
Col6a4-201ENSMUST00000121963 Sprr2kO70562 68 aa5.4□□□□□ -1.55
Col6a4-201ENSMUST00000121963 Gm20537G3UYK7 97 aa5.37□□□□□ -1.55
Col6a4-201ENSMUST00000121963 Gm17416Q30KP4 66 aa5.36□□□□□ -1.55
Col6a4-201ENSMUST00000121963 SmcpP15265 143 aa5.36□□□□□ -1.55
Col6a4-201ENSMUST00000121963 2310079G19RikQ9D6L6 185 aa5.33□□□□□ -1.56
Col6a4-201ENSMUST00000121963 Gm19668J3QMD1 248 aa5.33□□□□□ -1.56
Col6a4-201ENSMUST00000121963 Col7a1Q63870 2944 aa5.32□□□□□ -1.56
Col6a4-201ENSMUST00000121963 2210017I01RikA0A0A6YVV1 95 aa5.29□□□□□ -1.56
Col6a4-201ENSMUST00000121963 Helz2E9QAM5 2947 aaKnown RBP5.28□□□□□ -1.56
Col6a4-201ENSMUST00000121963 Krtap19-5O08632 62 aa5.28□□□□□ -1.56
Col6a4-201ENSMUST00000121963 Gm6358A0A087WPH4 74 aa5.27□□□□□ -1.57
Col6a4-201ENSMUST00000121963 Gm18596A0A1W2P860 280 aa5.27□□□□□ -1.57
Col6a4-201ENSMUST00000121963 Svep1A2AVA0 3567 aa5.24□□□□□ -1.57
Col6a4-201ENSMUST00000121963 Gm17402F6Z0L5 76 aa5.21□□□□□ -1.58
Col6a4-201ENSMUST00000121963 Ank2Q8C8R3 3898 aa5.2□□□□□ -1.58
Col6a4-201ENSMUST00000121963 CubnQ9JLB4 3623 aa5.17□□□□□ -1.58
Col6a4-201ENSMUST00000121963 Sprr2gO70558 76 aa5.13□□□□□ -1.59
Col6a4-201ENSMUST00000121963 Krtap13-1Q8K198 168 aa5.13□□□□□ -1.59
Col6a4-201ENSMUST00000121963 Krtap8-1O08633 61 aa5.11□□□□□ -1.59
Col6a4-201ENSMUST00000121963 Hspg2Q05793 3707 aaKnown RBP5.05□□□□□ -1.6
Col6a4-201ENSMUST00000121963 Muc4Q8JZM8 3443 aa5.03□□□□□ -1.6
Col6a4-201ENSMUST00000121963 BsnO88737 3942 aa5.03□□□□□ -1.6
Col6a4-201ENSMUST00000121963 Csmd3Q80T79 3707 aa4.98□□□□□ -1.61
Col6a4-201ENSMUST00000121963 Gm19402J3QJV4 266 aa4.98□□□□□ -1.61
Col6a4-201ENSMUST00000121963 LystP97412 3788 aa4.93□□□□□ -1.62
Col6a4-201ENSMUST00000121963 Huwe1Q7TMY8 4377 aaKnown RBP4.93□□□□□ -1.62
Col6a4-201ENSMUST00000121963 Gm11939A2A592 99 aa4.89□□□□□ -1.63
Col6a4-201ENSMUST00000121963 LorP18165 486 aa4.88□□□□□ -1.63
Col6a4-201ENSMUST00000121963 Fbn1Q61554 2873 aaKnown RBP4.86□□□□□ -1.63
Col6a4-201ENSMUST00000121963 Xirp2Q4U4S6 3784 aa4.84□□□□□ -1.63
Col6a4-201ENSMUST00000121963 Muc6Q80T03 2850 aa4.84□□□□□ -1.64
Col6a4-201ENSMUST00000121963 Krtap19-9aF8WH65 55 aa4.8□□□□□ -1.64
Col6a4-201ENSMUST00000121963 2310046K23RikA0A0A6YVW6 87 aa4.77□□□□□ -1.65
Col6a4-201ENSMUST00000121963 Krtap7-1Q9D3I6 87 aa4.77□□□□□ -1.65
Col6a4-201ENSMUST00000121963 Krtap3-1A2A591 98 aa4.73□□□□□ -1.65
Col6a4-201ENSMUST00000121963 Lce1mQ9CR91 182 aa4.61□□□□□ -1.67
Col6a4-201ENSMUST00000121963 Krtap1-5A2A590 122 aa4.57□□□□□ -1.68
Col6a4-201ENSMUST00000121963 Krtap1-4Q3V2D6 188 aa4.54□□□□□ -1.68
Col6a4-201ENSMUST00000121963 Dnah14A0A140LIJ4 4489 aa4.54□□□□□ -1.68
Col6a4-201ENSMUST00000121963 Krtap19-9bQ99NG9 58 aa4.53□□□□□ -1.68
Col6a4-201ENSMUST00000121963 Lce3bQ9CQM7 98 aa4.53□□□□□ -1.68
Col6a4-201ENSMUST00000121963 Kmt2aP55200 3966 aa4.48□□□□□ -1.69
Col6a4-201ENSMUST00000121963 Sprr2iO70560 76 aa4.48□□□□□ -1.69
Col6a4-201ENSMUST00000121963 Sprr2fO70557 76 aa4.46□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms