RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Lama1P19137 3084 aa8.37□□□□□ -1.07
Ubr2-201ENSMUST00000113335 Srrm2Q8BTI8 2703 aaKnown RBP8.36□□□□□ -1.07
Ubr2-201ENSMUST00000113335 ApcQ61315 2845 aa8.36□□□□□ -1.07
Ubr2-201ENSMUST00000113335 Tnp1P10856 55 aa8.35□□□□□ -1.07
Ubr2-201ENSMUST00000113335 Gm20537G3UYK7 97 aa8.35□□□□□ -1.07
Ubr2-201ENSMUST00000113335 2310057N15RikQ9D6T8 200 aa8.35□□□□□ -1.07
Ubr2-201ENSMUST00000113335 DspE9Q557 2883 aaKnown RBP8.34□□□□□ -1.07
Ubr2-201ENSMUST00000113335 Brca2P97929 3329 aa8.34□□□□□ -1.07
Ubr2-201ENSMUST00000113335 Gm40193A0A1B0GT39 78 aa8.31□□□□□ -1.08
Ubr2-201ENSMUST00000113335 Dmxl2Q8BPN8 3032 aa8.27□□□□□ -1.09
Ubr2-201ENSMUST00000113335 Adgrg4B7ZCC9 3073 aa8.25□□□□□ -1.09
Ubr2-201ENSMUST00000113335 Zzef1Q5SSH7 2924 aa8.2□□□□□ -1.1
Ubr2-201ENSMUST00000113335 Wdfy4E9Q2M9 3149 aa8.19□□□□□ -1.1
Ubr2-201ENSMUST00000113335 Igfn1Q3KNY0 2849 aa8.19□□□□□ -1.1
Ubr2-201ENSMUST00000113335 Col6a3E9PWQ3 3284 aa8.19□□□□□ -1.1
Ubr2-201ENSMUST00000113335 Dchs2A0A0A6YW72 3346 aa8.18□□□□□ -1.1
Ubr2-201ENSMUST00000113335 B930094E09RikQ8C4T2 136 aa8.15□□□□□ -1.11
Ubr2-201ENSMUST00000113335 Zfhx3Q61329 3726 aa8.15□□□□□ -1.11
Ubr2-201ENSMUST00000113335 A930033H14RikG5E8X6 103 aa8.1□□□□□ -1.11
Ubr2-201ENSMUST00000113335 NbeaQ9EPN1 2936 aa8.09□□□□□ -1.11
Ubr2-201ENSMUST00000113335 2310079G19RikQ9D6L6 185 aa8.07□□□□□ -1.12
Ubr2-201ENSMUST00000113335 LrbaQ9ESE1 2856 aa8.06□□□□□ -1.12
Ubr2-201ENSMUST00000113335 Celsr2Q9R0M0 2920 aa8.04□□□□□ -1.12
Ubr2-201ENSMUST00000113335 VcanQ62059 3357 aa8.03□□□□□ -1.12
Ubr2-201ENSMUST00000113335 Prm2P07978 107 aa8.02□□□□□ -1.13
Ubr2-201ENSMUST00000113335 Dchs1E9PVD3 3291 aa7.99□□□□□ -1.13
Ubr2-201ENSMUST00000113335 SpegQ62407 3262 aa7.97□□□□□ -1.13
Ubr2-201ENSMUST00000113335 Pdzd2E9Q1M1 2796 aa7.96□□□□□ -1.14
Ubr2-201ENSMUST00000113335 Tenm4Q3UHK6 2771 aa7.96□□□□□ -1.14
Ubr2-201ENSMUST00000113335 Chd9Q8BYH8 2885 aa7.93□□□□□ -1.14
Ubr2-201ENSMUST00000113335 FlncQ8VHX6 2726 aaKnown RBP7.92□□□□□ -1.14
Ubr2-201ENSMUST00000113335 Wdfy3Q6VNB8 3508 aa7.91□□□□□ -1.14
Ubr2-201ENSMUST00000113335 Trank1Q8BV79 2999 aa7.89□□□□□ -1.15
Ubr2-201ENSMUST00000113335 RelnQ60841 3461 aa7.89□□□□□ -1.15
Ubr2-201ENSMUST00000113335 Myo15aQ9QZZ4 3511 aa7.88□□□□□ -1.15
Ubr2-201ENSMUST00000113335 Tenm3Q9WTS6 2715 aa7.85□□□□□ -1.15
Ubr2-201ENSMUST00000113335 Gm9736A0A1W2P7N1 277 aa7.85□□□□□ -1.15
Ubr2-201ENSMUST00000113335 Gm17416Q30KP4 66 aa7.84□□□□□ -1.15
Ubr2-201ENSMUST00000113335 Nf1Q04690 2841 aa7.79□□□□□ -1.16
Ubr2-201ENSMUST00000113335 Tenm1Q9WTS4 2731 aa7.76□□□□□ -1.17
Ubr2-201ENSMUST00000113335 Gm9918Q8BUR5 174 aa7.75□□□□□ -1.17
Ubr2-201ENSMUST00000113335 Csmd1Q923L3 3564 aa7.74□□□□□ -1.17
Ubr2-201ENSMUST00000113335 Helz2E9QAM5 2947 aaKnown RBP7.74□□□□□ -1.17
Ubr2-201ENSMUST00000113335 2210017I01RikA0A0A6YVV1 95 aa7.73□□□□□ -1.17
Ubr2-201ENSMUST00000113335 DmdP11531 3678 aa7.69□□□□□ -1.18
Ubr2-201ENSMUST00000113335 Vps13cQ8BX70 3748 aa7.68□□□□□ -1.18
Ubr2-201ENSMUST00000113335 Akap9Q70FJ1 3797 aa7.67□□□□□ -1.18
Ubr2-201ENSMUST00000113335 Gm17402F6Z0L5 76 aa7.66□□□□□ -1.18
Ubr2-201ENSMUST00000113335 Tenm2Q9WTS5 2764 aa7.61□□□□□ -1.19
Ubr2-201ENSMUST00000113335 SpenQ62504 3644 aaKnown RBP7.61□□□□□ -1.19
Ubr2-201ENSMUST00000113335 Megf8P60882 2789 aa7.56□□□□□ -1.2
Ubr2-201ENSMUST00000113335 Gm10318A0A1W2P728 225 aa7.52□□□□□ -1.2
Ubr2-201ENSMUST00000113335 Smg1Q8BKX6 3658 aaKnown RBP7.5□□□□□ -1.21
Ubr2-201ENSMUST00000113335 Muc5acE9QAQ8 3455 aa7.48□□□□□ -1.21
Ubr2-201ENSMUST00000113335 Gm11939A2A592 99 aa7.45□□□□□ -1.22
Ubr2-201ENSMUST00000113335 Gm19668J3QMD1 248 aa7.45□□□□□ -1.22
Ubr2-201ENSMUST00000113335 Krtap13-1Q8K198 168 aa7.36□□□□□ -1.23
Ubr2-201ENSMUST00000113335 4933428G20RikQ9D3X4 101 aa7.32□□□□□ -1.24
Ubr2-201ENSMUST00000113335 Crct1Q6PAI5 102 aa7.31□□□□□ -1.24
Ubr2-201ENSMUST00000113335 VwfQ8CIZ8 2813 aa7.31□□□□□ -1.24
Ubr2-201ENSMUST00000113335 Zfhx4Q9JJN2 3550 aa7.3□□□□□ -1.24
Ubr2-201ENSMUST00000113335 Krtap19-5O08632 62 aa7.27□□□□□ -1.24
Ubr2-201ENSMUST00000113335 OtogO55225 2910 aa7.26□□□□□ -1.25
Ubr2-201ENSMUST00000113335 Lama5Q61001 3718 aa7.25□□□□□ -1.25
Ubr2-201ENSMUST00000113335 Gm884A2A9H6 3643 aa7.24□□□□□ -1.25
Ubr2-201ENSMUST00000113335 Krtap3-1A2A591 98 aa7.23□□□□□ -1.25
Ubr2-201ENSMUST00000113335 Krtap3-2Q9D638 99 aa7.22□□□□□ -1.25
Ubr2-201ENSMUST00000113335 Krtap3-3Q9D7P0 99 aa7.22□□□□□ -1.25
Ubr2-201ENSMUST00000113335 Cmya5Q70KF4 3739 aa7.12□□□□□ -1.27
Ubr2-201ENSMUST00000113335 Svep1A2AVA0 3567 aa7.08□□□□□ -1.28
Ubr2-201ENSMUST00000113335 Muc4Q8JZM8 3443 aa7.01□□□□□ -1.29
Ubr2-201ENSMUST00000113335 Fbn1Q61554 2873 aaKnown RBP6.99□□□□□ -1.29
Ubr2-201ENSMUST00000113335 Gm6358A0A087WPH4 74 aa6.85□□□□□ -1.31
Ubr2-201ENSMUST00000113335 Col7a1Q63870 2944 aa6.83□□□□□ -1.32
Ubr2-201ENSMUST00000113335 Ank2Q8C8R3 3898 aa6.8□□□□□ -1.32
Ubr2-201ENSMUST00000113335 Sprr2a3Q4KL71 83 aa6.71□□□□□ -1.34
Ubr2-201ENSMUST00000113335 Sprr2a1Q9CQK8 83 aa6.71□□□□□ -1.34
Ubr2-201ENSMUST00000113335 Csmd2V9GX34 3611 aa6.69□□□□□ -1.34
Ubr2-201ENSMUST00000113335 Krtap1-5A2A590 122 aa6.69□□□□□ -1.34
Ubr2-201ENSMUST00000113335 Krtap7-1Q9D3I6 87 aa6.68□□□□□ -1.34
Ubr2-201ENSMUST00000113335 LystP97412 3788 aa6.61□□□□□ -1.35
Ubr2-201ENSMUST00000113335 Krtap19-9aF8WH65 55 aa6.61□□□□□ -1.35
Ubr2-201ENSMUST00000113335 Dnah14A0A140LIJ4 4489 aa6.59□□□□□ -1.35
Ubr2-201ENSMUST00000113335 Muc6Q80T03 2850 aa6.57□□□□□ -1.36
Ubr2-201ENSMUST00000113335 Huwe1Q7TMY8 4377 aaKnown RBP6.56□□□□□ -1.36
Ubr2-201ENSMUST00000113335 CubnQ9JLB4 3623 aa6.54□□□□□ -1.36
Ubr2-201ENSMUST00000113335 Dnah10D3YYQ8 4591 aa6.53□□□□□ -1.36
Ubr2-201ENSMUST00000113335 Krtap1-4Q3V2D6 188 aa6.52□□□□□ -1.37
Ubr2-201ENSMUST00000113335 Krtap8-1O08633 61 aa6.51□□□□□ -1.37
Ubr2-201ENSMUST00000113335 Dnah5Q8VHE6 4621 aa6.47□□□□□ -1.37
Ubr2-201ENSMUST00000113335 Gm19402J3QJV4 266 aa6.45□□□□□ -1.38
Ubr2-201ENSMUST00000113335 Krtap19-9bQ99NG9 58 aa6.44□□□□□ -1.38
Ubr2-201ENSMUST00000113335 LorP18165 486 aa6.43□□□□□ -1.38
Ubr2-201ENSMUST00000113335 Stard9Q80TF6 4561 aa6.31□□□□□ -1.4
Ubr2-201ENSMUST00000113335 Krtap12-1Q9Z287 130 aa6.3□□□□□ -1.4
Ubr2-201ENSMUST00000113335 Gm18596A0A1W2P860 280 aa6.29□□□□□ -1.4
Ubr2-201ENSMUST00000113335 Sprr2kO70562 68 aa6.28□□□□□ -1.4
Ubr2-201ENSMUST00000113335 Vps13dB1ART2 4390 aa6.26□□□□□ -1.41
Ubr2-201ENSMUST00000113335 Csmd3Q80T79 3707 aa6.24□□□□□ -1.41
Ubr2-201ENSMUST00000113335 PlecQ9QXS1 4691 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms