RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Lama2Q60675 3118 aaKnown RBP2.96□□□□□ -1.93
Vcan-203ENSMUST00000109546 UtrnE9Q6R7 3430 aa2.94□□□□□ -1.94
Vcan-203ENSMUST00000109546 NbeaQ9EPN1 2936 aa2.93□□□□□ -1.94
Vcan-203ENSMUST00000109546 Gm7137J3QMW1 236 aa2.92□□□□□ -1.94
Vcan-203ENSMUST00000109546 Ranbp2Q9ERU9 3053 aaKnown RBP2.91□□□□□ -1.94
Vcan-203ENSMUST00000109546 Dmxl2Q8BPN8 3032 aa2.91□□□□□ -1.94
Vcan-203ENSMUST00000109546 FryE9Q8I9 3020 aa2.89□□□□□ -1.95
Vcan-203ENSMUST00000109546 Celsr2Q9R0M0 2920 aa2.89□□□□□ -1.95
Vcan-203ENSMUST00000109546 Tenm4Q3UHK6 2771 aa2.89□□□□□ -1.95
Vcan-203ENSMUST00000109546 Wdfy4E9Q2M9 3149 aa2.88□□□□□ -1.95
Vcan-203ENSMUST00000109546 VwfQ8CIZ8 2813 aa2.88□□□□□ -1.95
Vcan-203ENSMUST00000109546 Vps13aQ5H8C4 3166 aa2.88□□□□□ -1.95
Vcan-203ENSMUST00000109546 Myo15bI7HPW8 3033 aa2.88□□□□□ -1.95
Vcan-203ENSMUST00000109546 Cfap54Q8C6S9 3106 aa2.86□□□□□ -1.95
Vcan-203ENSMUST00000109546 Krtap13-1Q8K198 168 aa2.86□□□□□ -1.95
Vcan-203ENSMUST00000109546 Gm36176A0A1W2P8D5 158 aa2.85□□□□□ -1.95
Vcan-203ENSMUST00000109546 TrioQ0KL02 3102 aa2.83□□□□□ -1.96
Vcan-203ENSMUST00000109546 Usp34Q6ZQ93 3582 aa2.82□□□□□ -1.96
Vcan-203ENSMUST00000109546 OtogO55225 2910 aa2.81□□□□□ -1.96
Vcan-203ENSMUST00000109546 Mki67E9PVX6 3177 aaKnown RBP2.79□□□□□ -1.96
Vcan-203ENSMUST00000109546 Gm9507D3Z5T3 223 aa2.77□□□□□ -1.97
Vcan-203ENSMUST00000109546 Helz2E9QAM5 2947 aaKnown RBP2.77□□□□□ -1.97
Vcan-203ENSMUST00000109546 AtmQ62388 3066 aa2.77□□□□□ -1.97
Vcan-203ENSMUST00000109546 Frem2Q6NVD0 3160 aa2.76□□□□□ -1.97
Vcan-203ENSMUST00000109546 Celsr1O35161 3034 aa2.75□□□□□ -1.97
Vcan-203ENSMUST00000109546 Cmya5Q70KF4 3739 aa2.74□□□□□ -1.97
Vcan-203ENSMUST00000109546 Akap9Q70FJ1 3797 aa2.74□□□□□ -1.97
Vcan-203ENSMUST00000109546 Rev3lQ61493 3122 aa2.73□□□□□ -1.97
Vcan-203ENSMUST00000109546 DmdP11531 3678 aa2.73□□□□□ -1.97
Vcan-203ENSMUST00000109546 Fbn1Q61554 2873 aaKnown RBP2.72□□□□□ -1.97
Vcan-203ENSMUST00000109546 Krtap10-4Q08EG8 221 aa2.72□□□□□ -1.97
Vcan-203ENSMUST00000109546 Vps13cQ8BX70 3748 aa2.72□□□□□ -1.97
Vcan-203ENSMUST00000109546 Gm18596A0A1W2P860 280 aa2.71□□□□□ -1.98
Vcan-203ENSMUST00000109546 Col12a1Q60847 3120 aa2.71□□□□□ -1.98
Vcan-203ENSMUST00000109546 Krtap10-10A0A1W2P7T6 217 aa2.7□□□□□ -1.98
Vcan-203ENSMUST00000109546 Krtap7-1Q9D3I6 87 aa2.7□□□□□ -1.98
Vcan-203ENSMUST00000109546 Lrrc37aB1AWG4 3215 aa2.7□□□□□ -1.98
Vcan-203ENSMUST00000109546 Gm9918Q8BUR5 174 aa2.7□□□□□ -1.98
Vcan-203ENSMUST00000109546 AspmQ8CJ27 3122 aa2.68□□□□□ -1.98
Vcan-203ENSMUST00000109546 Krtap3-1A2A591 98 aa2.66□□□□□ -1.98
Vcan-203ENSMUST00000109546 Col7a1Q63870 2944 aa2.66□□□□□ -1.98
Vcan-203ENSMUST00000109546 Lama3Q61789 3330 aa2.66□□□□□ -1.98
Vcan-203ENSMUST00000109546 Gm7173A0A0G2JEB6 3132 aa2.65□□□□□ -1.98
Vcan-203ENSMUST00000109546 Gm19402J3QJV4 266 aa2.65□□□□□ -1.98
Vcan-203ENSMUST00000109546 Gm2696A0A1W2P709 240 aa2.65□□□□□ -1.99
Vcan-203ENSMUST00000109546 Smg1Q8BKX6 3658 aaKnown RBP2.63□□□□□ -1.99
Vcan-203ENSMUST00000109546 Unc80Q8BLN6 3261 aa2.62□□□□□ -1.99
Vcan-203ENSMUST00000109546 Gm11939A2A592 99 aa2.62□□□□□ -1.99
Vcan-203ENSMUST00000109546 SpenQ62504 3644 aaKnown RBP2.61□□□□□ -1.99
Vcan-203ENSMUST00000109546 Sprr2a3Q4KL71 83 aa2.59□□□□□ -1.99
Vcan-203ENSMUST00000109546 Sprr2a1Q9CQK8 83 aa2.59□□□□□ -1.99
Vcan-203ENSMUST00000109546 Krtap3-2Q9D638 99 aa2.58□□□□□ -2
Vcan-203ENSMUST00000109546 Krtap3-3Q9D7P0 99 aa2.58□□□□□ -2
Vcan-203ENSMUST00000109546 Krtap19-9bQ99NG9 58 aa2.58□□□□□ -2
Vcan-203ENSMUST00000109546 Dchs2A0A0A6YW72 3346 aa2.57□□□□□ -2
Vcan-203ENSMUST00000109546 Gm6358A0A087WPH4 74 aa2.57□□□□□ -2
Vcan-203ENSMUST00000109546 Szt2A2A9C3 3431 aa2.56□□□□□ -2
Vcan-203ENSMUST00000109546 BsnO88737 3942 aa2.55□□□□□ -2
Vcan-203ENSMUST00000109546 Adgrg4B7ZCC9 3073 aa2.55□□□□□ -2
Vcan-203ENSMUST00000109546 HttP42859 3119 aa2.54□□□□□ -2
Vcan-203ENSMUST00000109546 Gm884A2A9H6 3643 aa2.54□□□□□ -2
Vcan-203ENSMUST00000109546 VcanQ62059 3357 aa2.53□□□□□ -2
Vcan-203ENSMUST00000109546 Zfhx4Q9JJN2 3550 aa2.53□□□□□ -2
Vcan-203ENSMUST00000109546 Krtap31-1Q9D644 177 aa2.53□□□□□ -2.01
Vcan-203ENSMUST00000109546 Krtap19-9aF8WH65 55 aa2.52□□□□□ -2.01
Vcan-203ENSMUST00000109546 Myo15aQ9QZZ4 3511 aa2.52□□□□□ -2.01
Vcan-203ENSMUST00000109546 Krtap31-2Q8CAY5 177 aa2.52□□□□□ -2.01
Vcan-203ENSMUST00000109546 Muc6Q80T03 2850 aa2.51□□□□□ -2.01
Vcan-203ENSMUST00000109546 Col6a3E9PWQ3 3284 aa2.5□□□□□ -2.01
Vcan-203ENSMUST00000109546 Xirp2Q4U4S6 3784 aa2.49□□□□□ -2.01
Vcan-203ENSMUST00000109546 Krtap8-1O08633 61 aa2.49□□□□□ -2.01
Vcan-203ENSMUST00000109546 Krtap12-1Q9Z287 130 aa2.49□□□□□ -2.01
Vcan-203ENSMUST00000109546 Krtap1-5A2A590 122 aa2.49□□□□□ -2.01
Vcan-203ENSMUST00000109546 Lama5Q61001 3718 aa2.48□□□□□ -2.01
Vcan-203ENSMUST00000109546 Cdh23Q99PF4 3354 aa2.48□□□□□ -2.01
Vcan-203ENSMUST00000109546 Brca2P97929 3329 aa2.47□□□□□ -2.01
Vcan-203ENSMUST00000109546 Wdfy3Q6VNB8 3508 aa2.47□□□□□ -2.01
Vcan-203ENSMUST00000109546 Celsr3Q91ZI0 3301 aa2.46□□□□□ -2.02
Vcan-203ENSMUST00000109546 Ank2Q8C8R3 3898 aa2.45□□□□□ -2.02
Vcan-203ENSMUST00000109546 RelnQ60841 3461 aa2.45□□□□□ -2.02
Vcan-203ENSMUST00000109546 Gm9736A0A1W2P7N1 277 aa2.44□□□□□ -2.02
Vcan-203ENSMUST00000109546 Gm10100J3QK64 120 aa2.41□□□□□ -2.02
Vcan-203ENSMUST00000109546 Gm10272F7CZ33 110 aa2.4□□□□□ -2.03
Vcan-203ENSMUST00000109546 2310046K23RikA0A0A6YVW6 87 aa2.39□□□□□ -2.03
Vcan-203ENSMUST00000109546 LystP97412 3788 aa2.39□□□□□ -2.03
Vcan-203ENSMUST00000109546 SpegQ62407 3262 aa2.39□□□□□ -2.03
Vcan-203ENSMUST00000109546 Csmd1Q923L3 3564 aa2.38□□□□□ -2.03
Vcan-203ENSMUST00000109546 Gm10142J3KMP7 120 aa2.37□□□□□ -2.03
Vcan-203ENSMUST00000109546 Dchs1E9PVD3 3291 aa2.37□□□□□ -2.03
Vcan-203ENSMUST00000109546 Krtap19-5O08632 62 aa2.36□□□□□ -2.03
Vcan-203ENSMUST00000109546 Krtap1-4Q3V2D6 188 aa2.35□□□□□ -2.03
Vcan-203ENSMUST00000109546 Hspg2Q05793 3707 aaKnown RBP2.35□□□□□ -2.03
Vcan-203ENSMUST00000109546 Sprr2gO70558 76 aa2.34□□□□□ -2.03
Vcan-203ENSMUST00000109546 Sprr2kO70562 68 aa2.34□□□□□ -2.04
Vcan-203ENSMUST00000109546 Csmd2V9GX34 3611 aa2.31□□□□□ -2.04
Vcan-203ENSMUST00000109546 Mt3P28184 68 aa2.31□□□□□ -2.04
Vcan-203ENSMUST00000109546 Lce3bQ9CQM7 98 aa2.3□□□□□ -2.04
Vcan-203ENSMUST00000109546 Lce3cQ91V05 98 aa2.29□□□□□ -2.04
Vcan-203ENSMUST00000109546 Crct1Q6PAI5 102 aa2.28□□□□□ -2.04
Vcan-203ENSMUST00000109546 Csmd3Q80T79 3707 aa2.27□□□□□ -2.05
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms