RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Col12a1Q60847 3120 aa3.86□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Gm7173A0A0G2JEB6 3132 aa3.86□□□□□ -1.79
Scn8a-205ENSMUST00000108910 2310061N02RikQ9D6S9 174 aa3.84□□□□□ -1.79
Scn8a-205ENSMUST00000108910 Krtap10-10A0A1W2P7T6 217 aa3.84□□□□□ -1.79
Scn8a-205ENSMUST00000108910 SmcpP15265 143 aa3.82□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Helz2E9QAM5 2947 aaKnown RBP3.82□□□□□ -1.8
Scn8a-205ENSMUST00000108910 AtmQ62388 3066 aa3.81□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Rps29P62274 56 aa3.81□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Frem2Q6NVD0 3160 aa3.8□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Celsr3Q91ZI0 3301 aa3.8□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Cox6b2Q80ZN9 88 aa3.8□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Ndufaf8A2AMZ4 74 aa3.79□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Tnp2P11378 117 aa3.79□□□□□ -1.8
Scn8a-205ENSMUST00000108910 HttP42859 3119 aa3.78□□□□□ -1.8
Scn8a-205ENSMUST00000108910 Celsr1O35161 3034 aa3.77□□□□□ -1.81
Scn8a-205ENSMUST00000108910 D6Ertd527eA0A0N4SWI3 464 aa3.75□□□□□ -1.81
Scn8a-205ENSMUST00000108910 Gm9112A2AI92 75 aa3.74□□□□□ -1.81
Scn8a-205ENSMUST00000108910 Gm2696A0A1W2P709 240 aa3.72□□□□□ -1.81
Scn8a-205ENSMUST00000108910 AspmQ8CJ27 3122 aa3.72□□□□□ -1.81
Scn8a-205ENSMUST00000108910 Cdh23Q99PF4 3354 aa3.7□□□□□ -1.82
Scn8a-205ENSMUST00000108910 Col7a1Q63870 2944 aa3.69□□□□□ -1.82
Scn8a-205ENSMUST00000108910 OtogO55225 2910 aa3.68□□□□□ -1.82
Scn8a-205ENSMUST00000108910 Akap9Q70FJ1 3797 aa3.68□□□□□ -1.82
Scn8a-205ENSMUST00000108910 Prm2P07978 107 aa3.67□□□□□ -1.82
Scn8a-205ENSMUST00000108910 2310057N15RikQ9D6T8 200 aa3.65□□□□□ -1.83
Scn8a-205ENSMUST00000108910 Gm40193A0A1B0GT39 78 aa3.64□□□□□ -1.83
Scn8a-205ENSMUST00000108910 Gm5965D3Z724 196 aa3.64□□□□□ -1.83
Scn8a-205ENSMUST00000108910 Unc80Q8BLN6 3261 aa3.62□□□□□ -1.83
Scn8a-205ENSMUST00000108910 Fbn1Q61554 2873 aaKnown RBP3.61□□□□□ -1.83
Scn8a-205ENSMUST00000108910 Szt2A2A9C3 3431 aa3.6□□□□□ -1.83
Scn8a-205ENSMUST00000108910 Lrrc37aB1AWG4 3215 aa3.59□□□□□ -1.83
Scn8a-205ENSMUST00000108910 Adgrg4B7ZCC9 3073 aa3.58□□□□□ -1.84
Scn8a-205ENSMUST00000108910 Tnp1P10856 55 aa3.58□□□□□ -1.84
Scn8a-205ENSMUST00000108910 Gm20537G3UYK7 97 aa3.56□□□□□ -1.84
Scn8a-205ENSMUST00000108910 Vps13cQ8BX70 3748 aa3.54□□□□□ -1.84
Scn8a-205ENSMUST00000108910 Myo15aQ9QZZ4 3511 aa3.53□□□□□ -1.84
Scn8a-205ENSMUST00000108910 Col6a3E9PWQ3 3284 aa3.51□□□□□ -1.85
Scn8a-205ENSMUST00000108910 Ank2Q8C8R3 3898 aa3.51□□□□□ -1.85
Scn8a-205ENSMUST00000108910 DmdP11531 3678 aa3.5□□□□□ -1.85
Scn8a-205ENSMUST00000108910 Brca2P97929 3329 aa3.5□□□□□ -1.85
Scn8a-205ENSMUST00000108910 Dchs2A0A0A6YW72 3346 aa3.5□□□□□ -1.85
Scn8a-205ENSMUST00000108910 B930094E09RikQ8C4T2 136 aa3.49□□□□□ -1.85
Scn8a-205ENSMUST00000108910 A930033H14RikG5E8X6 103 aa3.48□□□□□ -1.85
Scn8a-205ENSMUST00000108910 SpegQ62407 3262 aa3.46□□□□□ -1.86
Scn8a-205ENSMUST00000108910 Cmya5Q70KF4 3739 aa3.46□□□□□ -1.86
Scn8a-205ENSMUST00000108910 2310079G19RikQ9D6L6 185 aa3.46□□□□□ -1.86
Scn8a-205ENSMUST00000108910 Muc6Q80T03 2850 aa3.45□□□□□ -1.86
Scn8a-205ENSMUST00000108910 Gm9736A0A1W2P7N1 277 aa3.42□□□□□ -1.86
Scn8a-205ENSMUST00000108910 Gm9918Q8BUR5 174 aa3.42□□□□□ -1.86
Scn8a-205ENSMUST00000108910 Csmd1Q923L3 3564 aa3.41□□□□□ -1.86
Scn8a-205ENSMUST00000108910 VcanQ62059 3357 aa3.41□□□□□ -1.86
Scn8a-205ENSMUST00000108910 Dchs1E9PVD3 3291 aa3.4□□□□□ -1.86
Scn8a-205ENSMUST00000108910 Gm17416Q30KP4 66 aa3.39□□□□□ -1.87
Scn8a-205ENSMUST00000108910 SpenQ62504 3644 aaKnown RBP3.39□□□□□ -1.87
Scn8a-205ENSMUST00000108910 Gm10318A0A1W2P728 225 aa3.36□□□□□ -1.87
Scn8a-205ENSMUST00000108910 BsnO88737 3942 aa3.35□□□□□ -1.87
Scn8a-205ENSMUST00000108910 2210017I01RikA0A0A6YVV1 95 aa3.33□□□□□ -1.88
Scn8a-205ENSMUST00000108910 Smg1Q8BKX6 3658 aaKnown RBP3.3□□□□□ -1.88
Scn8a-205ENSMUST00000108910 Gm17402F6Z0L5 76 aa3.29□□□□□ -1.88
Scn8a-205ENSMUST00000108910 Wdfy3Q6VNB8 3508 aa3.28□□□□□ -1.88
Scn8a-205ENSMUST00000108910 RelnQ60841 3461 aa3.24□□□□□ -1.89
Scn8a-205ENSMUST00000108910 Muc5acE9QAQ8 3455 aa3.23□□□□□ -1.89
Scn8a-205ENSMUST00000108910 Lama5Q61001 3718 aa3.23□□□□□ -1.89
Scn8a-205ENSMUST00000108910 Gm884A2A9H6 3643 aa3.22□□□□□ -1.89
Scn8a-205ENSMUST00000108910 Muc4Q8JZM8 3443 aa3.21□□□□□ -1.89
Scn8a-205ENSMUST00000108910 Crct1Q6PAI5 102 aa3.21□□□□□ -1.9
Scn8a-205ENSMUST00000108910 Gm19668J3QMD1 248 aa3.21□□□□□ -1.9
Scn8a-205ENSMUST00000108910 Gm11939A2A592 99 aa3.2□□□□□ -1.9
Scn8a-205ENSMUST00000108910 Zfhx4Q9JJN2 3550 aa3.19□□□□□ -1.9
Scn8a-205ENSMUST00000108910 Huwe1Q7TMY8 4377 aaKnown RBP3.18□□□□□ -1.9
Scn8a-205ENSMUST00000108910 4933428G20RikQ9D3X4 101 aa3.18□□□□□ -1.9
Scn8a-205ENSMUST00000108910 Krtap13-1Q8K198 168 aa3.17□□□□□ -1.9
Scn8a-205ENSMUST00000108910 Krtap19-5O08632 62 aa3.16□□□□□ -1.9
Scn8a-205ENSMUST00000108910 LystP97412 3788 aa3.13□□□□□ -1.91
Scn8a-205ENSMUST00000108910 Csmd2V9GX34 3611 aa3.12□□□□□ -1.91
Scn8a-205ENSMUST00000108910 Xirp2Q4U4S6 3784 aa3.1□□□□□ -1.91
Scn8a-205ENSMUST00000108910 Krtap3-1A2A591 98 aa3.09□□□□□ -1.91
Scn8a-205ENSMUST00000108910 Krtap3-2Q9D638 99 aa3.08□□□□□ -1.92
Scn8a-205ENSMUST00000108910 Krtap3-3Q9D7P0 99 aa3.08□□□□□ -1.92
Scn8a-205ENSMUST00000108910 Dnah3Q8BW94 4083 aa3.03□□□□□ -1.92
Scn8a-205ENSMUST00000108910 Csmd3Q80T79 3707 aa3.03□□□□□ -1.92
Scn8a-205ENSMUST00000108910 Gm6358A0A087WPH4 74 aa3.01□□□□□ -1.93
Scn8a-205ENSMUST00000108910 Dnah14A0A140LIJ4 4489 aa3□□□□□ -1.93
Scn8a-205ENSMUST00000108910 Hspg2Q05793 3707 aaKnown RBP3□□□□□ -1.93
Scn8a-205ENSMUST00000108910 Dnah7bL7N1Y0 4068 aa2.96□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Dnah10D3YYQ8 4591 aa2.95□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Dnah1E9Q8T7 4250 aa2.95□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Dnah7cA0A087WR13 4024 aa2.95□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Vps13bQ80TY5 3993 aa2.93□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Dnah7aE9Q0T8 4024 aa2.92□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Svep1A2AVA0 3567 aa2.91□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Dnah17Q69Z23 4481 aa2.9□□□□□ -1.94
Scn8a-205ENSMUST00000108910 Krtap1-5A2A590 122 aa2.9□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Sprr2a3Q4KL71 83 aa2.87□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Sprr2a1Q9CQK8 83 aa2.87□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Krtap19-9aF8WH65 55 aa2.87□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Krtap7-1Q9D3I6 87 aa2.85□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Vps13dB1ART2 4390 aa2.85□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Dnah2P0C6F1 4456 aa2.85□□□□□ -1.95
Scn8a-205ENSMUST00000108910 Sprr2kO70562 68 aa2.85□□□□□ -1.95
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms