RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 BptfA2A654 3036 aaKnown RBP8.51□□□□□ -1.05
Clcn3-203ENSMUST00000093490 Gm21887J3QQ04 176 aa8.51□□□□□ -1.05
Clcn3-203ENSMUST00000093490 Gm5965D3Z724 196 aa8.46□□□□□ -1.06
Clcn3-203ENSMUST00000093490 Lama1P19137 3084 aa8.45□□□□□ -1.06
Clcn3-203ENSMUST00000093490 Tex15F8VPN2 2785 aa8.44□□□□□ -1.06
Clcn3-203ENSMUST00000093490 A930033H14RikG5E8X6 103 aa8.43□□□□□ -1.06
Clcn3-203ENSMUST00000093490 Adgrg4B7ZCC9 3073 aa8.42□□□□□ -1.06
Clcn3-203ENSMUST00000093490 TgO08710 2766 aa8.42□□□□□ -1.06
Clcn3-203ENSMUST00000093490 Gm20537G3UYK7 97 aa8.37□□□□□ -1.07
Clcn3-203ENSMUST00000093490 Srrm2Q8BTI8 2703 aaKnown RBP8.36□□□□□ -1.07
Clcn3-203ENSMUST00000093490 Tnp1P10856 55 aa8.34□□□□□ -1.07
Clcn3-203ENSMUST00000093490 Col6a3E9PWQ3 3284 aa8.34□□□□□ -1.07
Clcn3-203ENSMUST00000093490 Dchs2A0A0A6YW72 3346 aa8.33□□□□□ -1.08
Clcn3-203ENSMUST00000093490 Gm9112A2AI92 75 aa8.28□□□□□ -1.08
Clcn3-203ENSMUST00000093490 2310057N15RikQ9D6T8 200 aa8.27□□□□□ -1.09
Clcn3-203ENSMUST00000093490 Brca2P97929 3329 aa8.26□□□□□ -1.09
Clcn3-203ENSMUST00000093490 Celsr3Q91ZI0 3301 aa8.26□□□□□ -1.09
Clcn3-203ENSMUST00000093490 Zzef1Q5SSH7 2924 aa8.24□□□□□ -1.09
Clcn3-203ENSMUST00000093490 Frem2Q6NVD0 3160 aa8.24□□□□□ -1.09
Clcn3-203ENSMUST00000093490 Tenm3Q9WTS6 2715 aa8.23□□□□□ -1.09
Clcn3-203ENSMUST00000093490 2310079G19RikQ9D6L6 185 aa8.23□□□□□ -1.09
Clcn3-203ENSMUST00000093490 VcanQ62059 3357 aa8.23□□□□□ -1.09
Clcn3-203ENSMUST00000093490 Trank1Q8BV79 2999 aa8.22□□□□□ -1.09
Clcn3-203ENSMUST00000093490 Celsr2Q9R0M0 2920 aa8.2□□□□□ -1.1
Clcn3-203ENSMUST00000093490 Pdzd2E9Q1M1 2796 aa8.2□□□□□ -1.1
Clcn3-203ENSMUST00000093490 B930094E09RikQ8C4T2 136 aa8.19□□□□□ -1.1
Clcn3-203ENSMUST00000093490 Chd9Q8BYH8 2885 aa8.19□□□□□ -1.1
Clcn3-203ENSMUST00000093490 Gm17416Q30KP4 66 aa8.16□□□□□ -1.1
Clcn3-203ENSMUST00000093490 ApcQ61315 2845 aa8.16□□□□□ -1.1
Clcn3-203ENSMUST00000093490 Nf1Q04690 2841 aa8.14□□□□□ -1.11
Clcn3-203ENSMUST00000093490 LrbaQ9ESE1 2856 aa8.02□□□□□ -1.13
Clcn3-203ENSMUST00000093490 Dchs1E9PVD3 3291 aa8□□□□□ -1.13
Clcn3-203ENSMUST00000093490 Gm17402F6Z0L5 76 aa7.96□□□□□ -1.14
Clcn3-203ENSMUST00000093490 2210017I01RikA0A0A6YVV1 95 aa7.93□□□□□ -1.14
Clcn3-203ENSMUST00000093490 SpegQ62407 3262 aa7.91□□□□□ -1.14
Clcn3-203ENSMUST00000093490 RelnQ60841 3461 aa7.88□□□□□ -1.15
Clcn3-203ENSMUST00000093490 Tenm1Q9WTS4 2731 aa7.86□□□□□ -1.15
Clcn3-203ENSMUST00000093490 Tenm2Q9WTS5 2764 aa7.86□□□□□ -1.15
Clcn3-203ENSMUST00000093490 Gm9736A0A1W2P7N1 277 aa7.83□□□□□ -1.16
Clcn3-203ENSMUST00000093490 Wdfy3Q6VNB8 3508 aa7.82□□□□□ -1.16
Clcn3-203ENSMUST00000093490 Zfhx3Q61329 3726 aa7.76□□□□□ -1.17
Clcn3-203ENSMUST00000093490 Myo15aQ9QZZ4 3511 aa7.74□□□□□ -1.17
Clcn3-203ENSMUST00000093490 Krtap19-5O08632 62 aa7.72□□□□□ -1.17
Clcn3-203ENSMUST00000093490 Prm2P07978 107 aa7.66□□□□□ -1.18
Clcn3-203ENSMUST00000093490 Gm9918Q8BUR5 174 aa7.66□□□□□ -1.18
Clcn3-203ENSMUST00000093490 Muc5acE9QAQ8 3455 aa7.65□□□□□ -1.18
Clcn3-203ENSMUST00000093490 Helz2E9QAM5 2947 aaKnown RBP7.65□□□□□ -1.19
Clcn3-203ENSMUST00000093490 OtogO55225 2910 aa7.64□□□□□ -1.19
Clcn3-203ENSMUST00000093490 Gm11939A2A592 99 aa7.62□□□□□ -1.19
Clcn3-203ENSMUST00000093490 DmdP11531 3678 aa7.6□□□□□ -1.19
Clcn3-203ENSMUST00000093490 Megf8P60882 2789 aa7.59□□□□□ -1.19
Clcn3-203ENSMUST00000093490 Akap9Q70FJ1 3797 aa7.58□□□□□ -1.2
Clcn3-203ENSMUST00000093490 Vps13cQ8BX70 3748 aa7.5□□□□□ -1.21
Clcn3-203ENSMUST00000093490 Gm19668J3QMD1 248 aa7.47□□□□□ -1.21
Clcn3-203ENSMUST00000093490 Krtap13-1Q8K198 168 aa7.43□□□□□ -1.22
Clcn3-203ENSMUST00000093490 Zfhx4Q9JJN2 3550 aa7.43□□□□□ -1.22
Clcn3-203ENSMUST00000093490 Krtap3-2Q9D638 99 aa7.42□□□□□ -1.22
Clcn3-203ENSMUST00000093490 Krtap3-3Q9D7P0 99 aa7.42□□□□□ -1.22
Clcn3-203ENSMUST00000093490 Fbn1Q61554 2873 aaKnown RBP7.4□□□□□ -1.22
Clcn3-203ENSMUST00000093490 Ank2Q8C8R3 3898 aa7.39□□□□□ -1.23
Clcn3-203ENSMUST00000093490 4933428G20RikQ9D3X4 101 aa7.37□□□□□ -1.23
Clcn3-203ENSMUST00000093490 Krtap3-1A2A591 98 aa7.35□□□□□ -1.23
Clcn3-203ENSMUST00000093490 Col7a1Q63870 2944 aa7.34□□□□□ -1.24
Clcn3-203ENSMUST00000093490 VwfQ8CIZ8 2813 aa7.33□□□□□ -1.24
Clcn3-203ENSMUST00000093490 Lama5Q61001 3718 aa7.31□□□□□ -1.24
Clcn3-203ENSMUST00000093490 Crct1Q6PAI5 102 aa7.19□□□□□ -1.26
Clcn3-203ENSMUST00000093490 Smg1Q8BKX6 3658 aaKnown RBP7.18□□□□□ -1.26
Clcn3-203ENSMUST00000093490 Gm10318A0A1W2P728 225 aa7.17□□□□□ -1.26
Clcn3-203ENSMUST00000093490 Muc6Q80T03 2850 aa7.16□□□□□ -1.26
Clcn3-203ENSMUST00000093490 Huwe1Q7TMY8 4377 aaKnown RBP7.05□□□□□ -1.28
Clcn3-203ENSMUST00000093490 SpenQ62504 3644 aaKnown RBP7.03□□□□□ -1.28
Clcn3-203ENSMUST00000093490 Csmd1Q923L3 3564 aa7.01□□□□□ -1.29
Clcn3-203ENSMUST00000093490 Muc4Q8JZM8 3443 aa7.01□□□□□ -1.29
Clcn3-203ENSMUST00000093490 Krtap1-5A2A590 122 aa6.97□□□□□ -1.29
Clcn3-203ENSMUST00000093490 Dnah14A0A140LIJ4 4489 aa6.9□□□□□ -1.31
Clcn3-203ENSMUST00000093490 Gm18596A0A1W2P860 280 aa6.89□□□□□ -1.31
Clcn3-203ENSMUST00000093490 Sprr2a3Q4KL71 83 aa6.87□□□□□ -1.31
Clcn3-203ENSMUST00000093490 Sprr2a1Q9CQK8 83 aa6.87□□□□□ -1.31
Clcn3-203ENSMUST00000093490 Gm884A2A9H6 3643 aa6.87□□□□□ -1.31
Clcn3-203ENSMUST00000093490 Krtap19-9aF8WH65 55 aa6.83□□□□□ -1.32
Clcn3-203ENSMUST00000093490 Vps13dB1ART2 4390 aa6.82□□□□□ -1.32
Clcn3-203ENSMUST00000093490 Svep1A2AVA0 3567 aa6.81□□□□□ -1.32
Clcn3-203ENSMUST00000093490 Krtap7-1Q9D3I6 87 aa6.79□□□□□ -1.32
Clcn3-203ENSMUST00000093490 Stard9Q80TF6 4561 aa6.78□□□□□ -1.32
Clcn3-203ENSMUST00000093490 Dnah5Q8VHE6 4621 aa6.75□□□□□ -1.33
Clcn3-203ENSMUST00000093490 Krtap8-1O08633 61 aa6.73□□□□□ -1.33
Clcn3-203ENSMUST00000093490 Krtap1-4Q3V2D6 188 aa6.72□□□□□ -1.33
Clcn3-203ENSMUST00000093490 Cmya5Q70KF4 3739 aa6.71□□□□□ -1.34
Clcn3-203ENSMUST00000093490 PlecQ9QXS1 4691 aaKnown RBP6.7□□□□□ -1.34
Clcn3-203ENSMUST00000093490 Dnah17Q69Z23 4481 aa6.68□□□□□ -1.34
Clcn3-203ENSMUST00000093490 Csmd2V9GX34 3611 aa6.64□□□□□ -1.35
Clcn3-203ENSMUST00000093490 LorP18165 486 aa6.63□□□□□ -1.35
Clcn3-203ENSMUST00000093490 Dnah10D3YYQ8 4591 aa6.61□□□□□ -1.35
Clcn3-203ENSMUST00000093490 Krtap19-9bQ99NG9 58 aa6.55□□□□□ -1.36
Clcn3-203ENSMUST00000093490 Lce1mQ9CR91 182 aa6.54□□□□□ -1.36
Clcn3-203ENSMUST00000093490 Dync2h1Q45VK7 4306 aa6.53□□□□□ -1.36
Clcn3-203ENSMUST00000093490 Gm6358A0A087WPH4 74 aa6.53□□□□□ -1.36
Clcn3-203ENSMUST00000093490 Krtap12-1Q9Z287 130 aa6.53□□□□□ -1.36
Clcn3-203ENSMUST00000093490 Gm19402J3QJV4 266 aa6.52□□□□□ -1.37
Clcn3-203ENSMUST00000093490 Sprr2kO70562 68 aa6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms