RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 Gm3238W4VSP7 230 aa5.65□□□□□ -1.5
Col4a4-201ENSMUST00000087050 Gm17349F7BGH6 99 aa5.65□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Tnp1P10856 55 aa5.63□□□□□ -1.51
Col4a4-201ENSMUST00000087050 D6Ertd527eA0A0N4SWI3 464 aa5.63□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Tnp2P11378 117 aa5.61□□□□□ -1.51
Col4a4-201ENSMUST00000087050 HttP42859 3119 aa5.6□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Tenm4Q3UHK6 2771 aa5.6□□□□□ -1.51
Col4a4-201ENSMUST00000087050 Col12a1Q60847 3120 aa5.59□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Helz2E9QAM5 2947 aaKnown RBP5.57□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Gm9508A0A1W2P7W0 230 aa5.57□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Krtap13O88375 197 aa5.57□□□□□ -1.52
Col4a4-201ENSMUST00000087050 AspmQ8CJ27 3122 aa5.54□□□□□ -1.52
Col4a4-201ENSMUST00000087050 Unc80Q8BLN6 3261 aa5.51□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Gm7137J3QMW1 236 aa5.51□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Vps13cQ8BX70 3748 aa5.51□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Tenm2Q9WTS5 2764 aa5.5□□□□□ -1.53
Col4a4-201ENSMUST00000087050 2310061N02RikQ9D6S9 174 aa5.49□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Celsr3Q91ZI0 3301 aa5.48□□□□□ -1.53
Col4a4-201ENSMUST00000087050 Akap9Q70FJ1 3797 aa5.45□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Prm2P07978 107 aa5.45□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Gm36176A0A1W2P8D5 158 aa5.44□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Gm20537G3UYK7 97 aa5.43□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Zfhx3Q61329 3726 aa5.41□□□□□ -1.54
Col4a4-201ENSMUST00000087050 DmdP11531 3678 aa5.4□□□□□ -1.54
Col4a4-201ENSMUST00000087050 Szt2A2A9C3 3431 aa5.38□□□□□ -1.55
Col4a4-201ENSMUST00000087050 OtogO55225 2910 aa5.37□□□□□ -1.55
Col4a4-201ENSMUST00000087050 Adgrg4B7ZCC9 3073 aa5.37□□□□□ -1.55
Col4a4-201ENSMUST00000087050 Gm5965D3Z724 196 aa5.34□□□□□ -1.55
Col4a4-201ENSMUST00000087050 B930094E09RikQ8C4T2 136 aa5.33□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Lrrc37aB1AWG4 3215 aa5.32□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Col7a1Q63870 2944 aa5.31□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Fbn1Q61554 2873 aaKnown RBP5.31□□□□□ -1.56
Col4a4-201ENSMUST00000087050 A930033H14RikG5E8X6 103 aa5.3□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Brca2P97929 3329 aa5.3□□□□□ -1.56
Col4a4-201ENSMUST00000087050 2310057N15RikQ9D6T8 200 aa5.29□□□□□ -1.56
Col4a4-201ENSMUST00000087050 SpenQ62504 3644 aaKnown RBP5.29□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Dchs2A0A0A6YW72 3346 aa5.29□□□□□ -1.56
Col4a4-201ENSMUST00000087050 VcanQ62059 3357 aa5.28□□□□□ -1.56
Col4a4-201ENSMUST00000087050 Myo15aQ9QZZ4 3511 aa5.26□□□□□ -1.57
Col4a4-201ENSMUST00000087050 Gm17402F6Z0L5 76 aa5.23□□□□□ -1.57
Col4a4-201ENSMUST00000087050 Gm9507D3Z5T3 223 aa5.22□□□□□ -1.57
Col4a4-201ENSMUST00000087050 2310079G19RikQ9D6L6 185 aa5.22□□□□□ -1.57
Col4a4-201ENSMUST00000087050 Col6a3E9PWQ3 3284 aa5.2□□□□□ -1.58
Col4a4-201ENSMUST00000087050 Gm17416Q30KP4 66 aa5.18□□□□□ -1.58
Col4a4-201ENSMUST00000087050 Wdfy3Q6VNB8 3508 aa5.16□□□□□ -1.58
Col4a4-201ENSMUST00000087050 Cmya5Q70KF4 3739 aa5.15□□□□□ -1.59
Col4a4-201ENSMUST00000087050 Ank2Q8C8R3 3898 aa5.14□□□□□ -1.59
Col4a4-201ENSMUST00000087050 Krtap10-4Q08EG8 221 aa5.09□□□□□ -1.59
Col4a4-201ENSMUST00000087050 Gm884A2A9H6 3643 aa5.08□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Smg1Q8BKX6 3658 aaKnown RBP5.07□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Lama5Q61001 3718 aa5.06□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Krtap10-10A0A1W2P7T6 217 aa5.04□□□□□ -1.6
Col4a4-201ENSMUST00000087050 SpegQ62407 3262 aa5.04□□□□□ -1.6
Col4a4-201ENSMUST00000087050 Dchs1E9PVD3 3291 aa5.03□□□□□ -1.6
Col4a4-201ENSMUST00000087050 2210017I01RikA0A0A6YVV1 95 aa5.01□□□□□ -1.61
Col4a4-201ENSMUST00000087050 Csmd1Q923L3 3564 aa5□□□□□ -1.61
Col4a4-201ENSMUST00000087050 4933428G20RikQ9D3X4 101 aa5□□□□□ -1.61
Col4a4-201ENSMUST00000087050 Zfhx4Q9JJN2 3550 aa4.96□□□□□ -1.62
Col4a4-201ENSMUST00000087050 RelnQ60841 3461 aa4.96□□□□□ -1.62
Col4a4-201ENSMUST00000087050 Gm2696A0A1W2P709 240 aa4.94□□□□□ -1.62
Col4a4-201ENSMUST00000087050 Muc6Q80T03 2850 aa4.92□□□□□ -1.62
Col4a4-201ENSMUST00000087050 BsnO88737 3942 aa4.87□□□□□ -1.63
Col4a4-201ENSMUST00000087050 Gm19668J3QMD1 248 aa4.83□□□□□ -1.64
Col4a4-201ENSMUST00000087050 LystP97412 3788 aa4.79□□□□□ -1.64
Col4a4-201ENSMUST00000087050 Muc5acE9QAQ8 3455 aa4.79□□□□□ -1.64
Col4a4-201ENSMUST00000087050 Xirp2Q4U4S6 3784 aa4.74□□□□□ -1.65
Col4a4-201ENSMUST00000087050 Csmd2V9GX34 3611 aa4.72□□□□□ -1.65
Col4a4-201ENSMUST00000087050 Gm11939A2A592 99 aa4.62□□□□□ -1.67
Col4a4-201ENSMUST00000087050 Muc4Q8JZM8 3443 aa4.62□□□□□ -1.67
Col4a4-201ENSMUST00000087050 Svep1A2AVA0 3567 aa4.61□□□□□ -1.67
Col4a4-201ENSMUST00000087050 Krtap13-1Q8K198 168 aa4.57□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Krtap3-1A2A591 98 aa4.56□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Gm9918Q8BUR5 174 aa4.56□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Gm9736A0A1W2P7N1 277 aa4.55□□□□□ -1.68
Col4a4-201ENSMUST00000087050 Krtap3-2Q9D638 99 aa4.52□□□□□ -1.69
Col4a4-201ENSMUST00000087050 Krtap3-3Q9D7P0 99 aa4.52□□□□□ -1.69
Col4a4-201ENSMUST00000087050 Dnah3Q8BW94 4083 aa4.49□□□□□ -1.69
Col4a4-201ENSMUST00000087050 Hspg2Q05793 3707 aaKnown RBP4.42□□□□□ -1.7
Col4a4-201ENSMUST00000087050 Krtap7-1Q9D3I6 87 aa4.4□□□□□ -1.7
Col4a4-201ENSMUST00000087050 Krtap19-5O08632 62 aa4.38□□□□□ -1.71
Col4a4-201ENSMUST00000087050 Csmd3Q80T79 3707 aa4.37□□□□□ -1.71
Col4a4-201ENSMUST00000087050 CubnQ9JLB4 3623 aa4.35□□□□□ -1.71
Col4a4-201ENSMUST00000087050 Sprr2a3Q4KL71 83 aa4.32□□□□□ -1.72
Col4a4-201ENSMUST00000087050 Sprr2a1Q9CQK8 83 aa4.32□□□□□ -1.72
Col4a4-201ENSMUST00000087050 Krtap1-5A2A590 122 aa4.31□□□□□ -1.72
Col4a4-201ENSMUST00000087050 Gm10318A0A1W2P728 225 aa4.28□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Dnah7bL7N1Y0 4068 aa4.25□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Krtap19-9aF8WH65 55 aa4.24□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Kmt2aP55200 3966 aa4.23□□□□□ -1.73
Col4a4-201ENSMUST00000087050 Krtap19-9bQ99NG9 58 aa4.2□□□□□ -1.74
Col4a4-201ENSMUST00000087050 Crct1Q6PAI5 102 aa4.2□□□□□ -1.74
Col4a4-201ENSMUST00000087050 Gm6358A0A087WPH4 74 aa4.15□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Huwe1Q7TMY8 4377 aaKnown RBP4.12□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Vps13bQ80TY5 3993 aa4.1□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Krtap8-1O08633 61 aa4.1□□□□□ -1.75
Col4a4-201ENSMUST00000087050 Krtap1-4Q3V2D6 188 aa4.09□□□□□ -1.76
Col4a4-201ENSMUST00000087050 Dnah7cA0A087WR13 4024 aa4.08□□□□□ -1.76
Col4a4-201ENSMUST00000087050 Dnah7aE9Q0T8 4024 aa4.07□□□□□ -1.76
Col4a4-201ENSMUST00000087050 PrkdcP97313 4128 aa4.02□□□□□ -1.77
Col4a4-201ENSMUST00000087050 Dnah6E9Q0B6 4144 aa4.02□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 89.2 ms