RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Romo1P60603 79 aa3.05□□□□□ -1.92
Ush2a-201ENSMUST00000060479 SpegQ62407 3262 aa3.05□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Tenm3Q9WTS6 2715 aa3.04□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Rpl37Q9D823 97 aa3.04□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Akap9Q70FJ1 3797 aa3.03□□□□□ -1.92
Ush2a-201ENSMUST00000060479 2310061N02RikQ9D6S9 174 aa3.03□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Krtap15-1Q9QZU5 150 aa3.02□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Gm10382Q3V0T5 144 aa3.02□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Krtap13O88375 197 aa3.01□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Myo15aQ9QZZ4 3511 aa3.01□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Krtap14O08640 167 aa3□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Prm2P07978 107 aa3□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Fam229aB2KGE5 128 aa3□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Tenm4Q3UHK6 2771 aa2.99□□□□□ -1.93
Ush2a-201ENSMUST00000060479 2310050C09RikG5E8Z3 280 aa2.98□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Rps29P62274 56 aa2.98□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Sec61bQ9CQS8 96 aaKnown RBP2.96□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Tnp2P11378 117 aa2.96□□□□□ -1.94
Ush2a-201ENSMUST00000060479 VwfQ8CIZ8 2813 aa2.96□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Gm19426M0QWC7 77 aa2.95□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Gm9507D3Z5T3 223 aa2.95□□□□□ -1.94
Ush2a-201ENSMUST00000060479 BC029722A0A0N4SW31 51 aa2.94□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Muc5acE9QAQ8 3455 aa2.94□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Megf8P60882 2789 aa2.94□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Gm5767A0A0J9YTU8 78 aa2.93□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Ndufaf8A2AMZ4 74 aa2.93□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Cox6b2Q80ZN9 88 aa2.92□□□□□ -1.94
Ush2a-201ENSMUST00000060479 SpenQ62504 3644 aaKnown RBP2.9□□□□□ -1.94
Ush2a-201ENSMUST00000060479 D6Ertd527eA0A0N4SWI3 464 aa2.9□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Krtap10-4Q08EG8 221 aa2.89□□□□□ -1.95
Ush2a-201ENSMUST00000060479 OtogO55225 2910 aa2.89□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Wdfy3Q6VNB8 3508 aa2.89□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Tenm2Q9WTS5 2764 aa2.87□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Krtap10-10A0A1W2P7T6 217 aa2.86□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Ank2Q8C8R3 3898 aa2.86□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Gm9112A2AI92 75 aa2.84□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Smg1Q8BKX6 3658 aaKnown RBP2.83□□□□□ -1.96
Ush2a-201ENSMUST00000060479 DmdP11531 3678 aa2.82□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Vps13cQ8BX70 3748 aa2.82□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Zfhx3Q61329 3726 aa2.81□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Csmd1Q923L3 3564 aa2.8□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Gm21887J3QQ04 176 aa2.8□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Gm20537G3UYK7 97 aa2.79□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Gm2696A0A1W2P709 240 aa2.79□□□□□ -1.96
Ush2a-201ENSMUST00000060479 A930033H14RikG5E8X6 103 aa2.79□□□□□ -1.96
Ush2a-201ENSMUST00000060479 2310079G19RikQ9D6L6 185 aa2.78□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Fbn1Q61554 2873 aaKnown RBP2.77□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Col7a1Q63870 2944 aa2.77□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Tnp1P10856 55 aa2.77□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Gm40193A0A1B0GT39 78 aa2.76□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Zfhx4Q9JJN2 3550 aa2.71□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Muc4Q8JZM8 3443 aa2.71□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Gm5965D3Z724 196 aa2.7□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Dnah14A0A140LIJ4 4489 aa2.69□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Lama5Q61001 3718 aa2.68□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Dnah10D3YYQ8 4591 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Krtap3-2Q9D638 99 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Krtap3-3Q9D7P0 99 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Gm17416Q30KP4 66 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 PlecQ9QXS1 4691 aaKnown RBP2.66□□□□□ -1.98
Ush2a-201ENSMUST00000060479 B930094E09RikQ8C4T2 136 aa2.66□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Gm11939A2A592 99 aa2.65□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Gm17402F6Z0L5 76 aa2.65□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Gm9918Q8BUR5 174 aa2.65□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Huwe1Q7TMY8 4377 aaKnown RBP2.64□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Svep1A2AVA0 3567 aa2.63□□□□□ -1.99
Ush2a-201ENSMUST00000060479 2310057N15RikQ9D6T8 200 aa2.62□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Cmya5Q70KF4 3739 aa2.62□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Vps13dB1ART2 4390 aa2.62□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Muc6Q80T03 2850 aa2.61□□□□□ -1.99
Ush2a-201ENSMUST00000060479 BsnO88737 3942 aa2.61□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Dnah5Q8VHE6 4621 aa2.6□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Dnah3Q8BW94 4083 aa2.59□□□□□ -1.99
Ush2a-201ENSMUST00000060479 2210017I01RikA0A0A6YVV1 95 aa2.59□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Gm9736A0A1W2P7N1 277 aa2.59□□□□□ -2
Ush2a-201ENSMUST00000060479 Dnah17Q69Z23 4481 aa2.58□□□□□ -2
Ush2a-201ENSMUST00000060479 Gm884A2A9H6 3643 aa2.56□□□□□ -2
Ush2a-201ENSMUST00000060479 Stard9Q80TF6 4561 aa2.56□□□□□ -2
Ush2a-201ENSMUST00000060479 Krtap3-1A2A591 98 aa2.56□□□□□ -2
Ush2a-201ENSMUST00000060479 Dnah6E9Q0B6 4144 aa2.55□□□□□ -2
Ush2a-201ENSMUST00000060479 LystP97412 3788 aa2.53□□□□□ -2
Ush2a-201ENSMUST00000060479 Fras1Q80T14 4010 aa2.53□□□□□ -2
Ush2a-201ENSMUST00000060479 Mycbp2Q7TPH6 4711 aa2.52□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Lrp1bQ9JI18 4599 aa2.51□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah2P0C6F1 4456 aa2.51□□□□□ -2.01
Ush2a-201ENSMUST00000060479 ApobE9Q414 4505 aa2.51□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah11E9Q7N9 4488 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Ryr1E9PZQ0 5035 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Krtap19-5O08632 62 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Csmd3Q80T79 3707 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah7cA0A087WR13 4024 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah7bL7N1Y0 4068 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 PrkdcP97313 4128 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dync1h1Q9JHU4 4644 aaKnown RBP2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Csmd2V9GX34 3611 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 SacsQ9JLC8 4582 aa2.47□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Krtap13-1Q8K198 168 aa2.46□□□□□ -2.02
Ush2a-201ENSMUST00000060479 Dnah7aE9Q0T8 4024 aa2.46□□□□□ -2.02
Ush2a-201ENSMUST00000060479 TnxbO35452 4006 aa2.45□□□□□ -2.02
Ush2a-201ENSMUST00000060479 4933428G20RikQ9D3X4 101 aa2.45□□□□□ -2.02
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms