RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Romo1P60603 79 aa3.05□□□□□ -1.92
Ush2a-201ENSMUST00000060479 SpegQ62407 3262 aa3.05□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Tenm3Q9WTS6 2715 aa3.04□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Rpl37Q9D823 97 aa3.04□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Akap9Q70FJ1 3797 aa3.03□□□□□ -1.92
Ush2a-201ENSMUST00000060479 2310061N02RikQ9D6S9 174 aa3.03□□□□□ -1.92
Ush2a-201ENSMUST00000060479 Krtap15-1Q9QZU5 150 aa3.02□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Gm10382Q3V0T5 144 aa3.02□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Krtap13O88375 197 aa3.01□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Myo15aQ9QZZ4 3511 aa3.01□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Krtap14O08640 167 aa3□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Prm2P07978 107 aa3□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Fam229aB2KGE5 128 aa3□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Tenm4Q3UHK6 2771 aa2.99□□□□□ -1.93
Ush2a-201ENSMUST00000060479 2310050C09RikG5E8Z3 280 aa2.98□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Rps29P62274 56 aa2.98□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Sec61bQ9CQS8 96 aaKnown RBP2.96□□□□□ -1.93
Ush2a-201ENSMUST00000060479 Tnp2P11378 117 aa2.96□□□□□ -1.94
Ush2a-201ENSMUST00000060479 VwfQ8CIZ8 2813 aa2.96□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Gm19426M0QWC7 77 aa2.95□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Gm9507D3Z5T3 223 aa2.95□□□□□ -1.94
Ush2a-201ENSMUST00000060479 BC029722A0A0N4SW31 51 aa2.94□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Muc5acE9QAQ8 3455 aa2.94□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Megf8P60882 2789 aa2.94□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Gm5767A0A0J9YTU8 78 aa2.93□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Ndufaf8A2AMZ4 74 aa2.93□□□□□ -1.94
Ush2a-201ENSMUST00000060479 Cox6b2Q80ZN9 88 aa2.92□□□□□ -1.94
Ush2a-201ENSMUST00000060479 SpenQ62504 3644 aaKnown RBP2.9□□□□□ -1.94
Ush2a-201ENSMUST00000060479 D6Ertd527eA0A0N4SWI3 464 aa2.9□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Krtap10-4Q08EG8 221 aa2.89□□□□□ -1.95
Ush2a-201ENSMUST00000060479 OtogO55225 2910 aa2.89□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Wdfy3Q6VNB8 3508 aa2.89□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Tenm2Q9WTS5 2764 aa2.87□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Krtap10-10A0A1W2P7T6 217 aa2.86□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Ank2Q8C8R3 3898 aa2.86□□□□□ -1.95
Ush2a-201ENSMUST00000060479 Gm9112A2AI92 75 aa2.84□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Smg1Q8BKX6 3658 aaKnown RBP2.83□□□□□ -1.96
Ush2a-201ENSMUST00000060479 DmdP11531 3678 aa2.82□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Vps13cQ8BX70 3748 aa2.82□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Zfhx3Q61329 3726 aa2.81□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Csmd1Q923L3 3564 aa2.8□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Gm21887J3QQ04 176 aa2.8□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Gm20537G3UYK7 97 aa2.79□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Gm2696A0A1W2P709 240 aa2.79□□□□□ -1.96
Ush2a-201ENSMUST00000060479 A930033H14RikG5E8X6 103 aa2.79□□□□□ -1.96
Ush2a-201ENSMUST00000060479 2310079G19RikQ9D6L6 185 aa2.78□□□□□ -1.96
Ush2a-201ENSMUST00000060479 Fbn1Q61554 2873 aaKnown RBP2.77□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Col7a1Q63870 2944 aa2.77□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Tnp1P10856 55 aa2.77□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Gm40193A0A1B0GT39 78 aa2.76□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Zfhx4Q9JJN2 3550 aa2.71□□□□□ -1.97
Ush2a-201ENSMUST00000060479 Muc4Q8JZM8 3443 aa2.71□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Gm5965D3Z724 196 aa2.7□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Dnah14A0A140LIJ4 4489 aa2.69□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Lama5Q61001 3718 aa2.68□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Dnah10D3YYQ8 4591 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Krtap3-2Q9D638 99 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Krtap3-3Q9D7P0 99 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Gm17416Q30KP4 66 aa2.67□□□□□ -1.98
Ush2a-201ENSMUST00000060479 PlecQ9QXS1 4691 aaKnown RBP2.66□□□□□ -1.98
Ush2a-201ENSMUST00000060479 B930094E09RikQ8C4T2 136 aa2.66□□□□□ -1.98
Ush2a-201ENSMUST00000060479 Gm11939A2A592 99 aa2.65□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Gm17402F6Z0L5 76 aa2.65□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Gm9918Q8BUR5 174 aa2.65□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Huwe1Q7TMY8 4377 aaKnown RBP2.64□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Svep1A2AVA0 3567 aa2.63□□□□□ -1.99
Ush2a-201ENSMUST00000060479 2310057N15RikQ9D6T8 200 aa2.62□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Cmya5Q70KF4 3739 aa2.62□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Vps13dB1ART2 4390 aa2.62□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Muc6Q80T03 2850 aa2.61□□□□□ -1.99
Ush2a-201ENSMUST00000060479 BsnO88737 3942 aa2.61□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Dnah5Q8VHE6 4621 aa2.6□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Dnah3Q8BW94 4083 aa2.59□□□□□ -1.99
Ush2a-201ENSMUST00000060479 2210017I01RikA0A0A6YVV1 95 aa2.59□□□□□ -1.99
Ush2a-201ENSMUST00000060479 Gm9736A0A1W2P7N1 277 aa2.59□□□□□ -2
Ush2a-201ENSMUST00000060479 Dnah17Q69Z23 4481 aa2.58□□□□□ -2
Ush2a-201ENSMUST00000060479 Gm884A2A9H6 3643 aa2.56□□□□□ -2
Ush2a-201ENSMUST00000060479 Stard9Q80TF6 4561 aa2.56□□□□□ -2
Ush2a-201ENSMUST00000060479 Krtap3-1A2A591 98 aa2.56□□□□□ -2
Ush2a-201ENSMUST00000060479 Dnah6E9Q0B6 4144 aa2.55□□□□□ -2
Ush2a-201ENSMUST00000060479 LystP97412 3788 aa2.53□□□□□ -2
Ush2a-201ENSMUST00000060479 Fras1Q80T14 4010 aa2.53□□□□□ -2
Ush2a-201ENSMUST00000060479 Mycbp2Q7TPH6 4711 aa2.52□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Lrp1bQ9JI18 4599 aa2.51□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah2P0C6F1 4456 aa2.51□□□□□ -2.01
Ush2a-201ENSMUST00000060479 ApobE9Q414 4505 aa2.51□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah11E9Q7N9 4488 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Ryr1E9PZQ0 5035 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Krtap19-5O08632 62 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Csmd3Q80T79 3707 aa2.49□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah7cA0A087WR13 4024 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dnah7bL7N1Y0 4068 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 PrkdcP97313 4128 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Dync1h1Q9JHU4 4644 aaKnown RBP2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Csmd2V9GX34 3611 aa2.48□□□□□ -2.01
Ush2a-201ENSMUST00000060479 SacsQ9JLC8 4582 aa2.47□□□□□ -2.01
Ush2a-201ENSMUST00000060479 Krtap13-1Q8K198 168 aa2.46□□□□□ -2.02
Ush2a-201ENSMUST00000060479 Dnah7aE9Q0T8 4024 aa2.46□□□□□ -2.02
Ush2a-201ENSMUST00000060479 TnxbO35452 4006 aa2.45□□□□□ -2.02
Ush2a-201ENSMUST00000060479 4933428G20RikQ9D3X4 101 aa2.45□□□□□ -2.02
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms