RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Defb1P56386 69 aa6.59□□□□□ -1.36
Col9a1-201ENSMUST00000054588 9230102O04RikA2ASX7 82 aa6.58□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Gm2310J3QNJ2 377 aa6.58□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Kmt2aP55200 3966 aa6.57□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Chtf8P0CG14 533 aa6.57□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Gm10999F6Q4M4 69 aa6.56□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Gm10160F6Y577 67 aa6.55□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Gm10065F6TJM2 114 aa6.55□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Dnah3Q8BW94 4083 aa6.55□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Ndufs5Q99LY9 106 aa6.53□□□□□ -1.36
Col9a1-201ENSMUST00000054588 Dnah17Q69Z23 4481 aa6.49□□□□□ -1.37
Col9a1-201ENSMUST00000054588 Dnah10D3YYQ8 4591 aa6.49□□□□□ -1.37
Col9a1-201ENSMUST00000054588 NbdyA0A0N4SUI7 68 aa6.49□□□□□ -1.37
Col9a1-201ENSMUST00000054588 Sec61gP60060 68 aa6.48□□□□□ -1.37
Col9a1-201ENSMUST00000054588 Cypt14J3QPF7 87 aa6.47□□□□□ -1.37
Col9a1-201ENSMUST00000054588 Cypt15B1AXS0 87 aa6.47□□□□□ -1.37
Col9a1-201ENSMUST00000054588 Dnah14A0A140LIJ4 4489 aa6.47□□□□□ -1.37
Col9a1-201ENSMUST00000054588 Krtap29-1A2A5X4 342 aa6.46□□□□□ -1.37
Col9a1-201ENSMUST00000054588 Q8BGJ3 129 aa6.46□□□□□ -1.38
Col9a1-201ENSMUST00000054588 4933415A04RikQ9D443 101 aa6.46□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Ndufb1P0DN34 57 aa6.46□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Gm16253D3Z167 63 aa6.43□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Gm20661K7N787 53 aa6.43□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Dnah1E9Q8T7 4250 aa6.42□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Krtap14O08640 167 aa6.42□□□□□ -1.38
Col9a1-201ENSMUST00000054588 OxtP35454 125 aa6.41□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Gm10643Q3URG9 111 aa6.41□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Dnah7bL7N1Y0 4068 aa6.41□□□□□ -1.38
Col9a1-201ENSMUST00000054588 Limd2Q8BGB5 128 aa6.35□□□□□ -1.39
Col9a1-201ENSMUST00000054588 Tnp2P11378 117 aa6.32□□□□□ -1.4
Col9a1-201ENSMUST00000054588 Dnah6E9Q0B6 4144 aa6.32□□□□□ -1.4
Col9a1-201ENSMUST00000054588 Uqcr11Q9CPX8 56 aa6.31□□□□□ -1.4
Col9a1-201ENSMUST00000054588 Gm21798J3QNU5 87 aa6.3□□□□□ -1.4
Col9a1-201ENSMUST00000054588 2310034C09RikQ9D746 214 aa6.25□□□□□ -1.41
Col9a1-201ENSMUST00000054588 Huwe1Q7TMY8 4377 aaKnown RBP6.24□□□□□ -1.41
Col9a1-201ENSMUST00000054588 Dnah11E9Q7N9 4488 aa6.23□□□□□ -1.41
Col9a1-201ENSMUST00000054588 Gm9918Q8BUR5 174 aa6.23□□□□□ -1.41
Col9a1-201ENSMUST00000054588 Gm3646F6S692 53 aa6.22□□□□□ -1.41
Col9a1-201ENSMUST00000054588 Dync2h1Q45VK7 4306 aa6.21□□□□□ -1.41
Col9a1-201ENSMUST00000054588 Dnah9B1AR51 4484 aa6.19□□□□□ -1.42
Col9a1-201ENSMUST00000054588 Gm26620Q9CY65 116 aa6.18□□□□□ -1.42
Col9a1-201ENSMUST00000054588 4930507D05RikQ8C9C9 103 aa6.16□□□□□ -1.42
Col9a1-201ENSMUST00000054588 TnxbO35452 4006 aa6.16□□□□□ -1.42
Col9a1-201ENSMUST00000054588 1700042G07RikB1AUF7 90 aa6.16□□□□□ -1.42
Col9a1-201ENSMUST00000054588 Krtap15-1Q9QZU5 150 aa6.14□□□□□ -1.43
Col9a1-201ENSMUST00000054588 Gm4491E0CX42 125 aa6.11□□□□□ -1.43
Col9a1-201ENSMUST00000054588 PlecQ9QXS1 4691 aaKnown RBP6.1□□□□□ -1.43
Col9a1-201ENSMUST00000054588 Gm17606F6ZL36 78 aa6.07□□□□□ -1.44
Col9a1-201ENSMUST00000054588 Fras1Q80T14 4010 aa6.04□□□□□ -1.44
Col9a1-201ENSMUST00000054588 PrkdcP97313 4128 aa6.02□□□□□ -1.45
Col9a1-201ENSMUST00000054588 2310079G19RikQ9D6L6 185 aa6.02□□□□□ -1.45
Col9a1-201ENSMUST00000054588 Rnase13Q5GAM7 153 aa6.01□□□□□ -1.45
Col9a1-201ENSMUST00000054588 Dnah5Q8VHE6 4621 aa6□□□□□ -1.45
Col9a1-201ENSMUST00000054588 Gm9736A0A1W2P7N1 277 aa6□□□□□ -1.45
Col9a1-201ENSMUST00000054588 A930033H14RikG5E8X6 103 aa5.98□□□□□ -1.45
Col9a1-201ENSMUST00000054588 Gm5965D3Z724 196 aa5.96□□□□□ -1.46
Col9a1-201ENSMUST00000054588 Rps29P62274 56 aa5.96□□□□□ -1.46
Col9a1-201ENSMUST00000054588 Gm3880A0A1B0GSB3 72 aa5.93□□□□□ -1.46
Col9a1-201ENSMUST00000054588 Krtap3-2Q9D638 99 aa5.93□□□□□ -1.46
Col9a1-201ENSMUST00000054588 Krtap3-3Q9D7P0 99 aa5.93□□□□□ -1.46
Col9a1-201ENSMUST00000054588 D6Ertd527eA0A0N4SWI3 464 aa5.93□□□□□ -1.46
Col9a1-201ENSMUST00000054588 Dnah2P0C6F1 4456 aa5.91□□□□□ -1.46
Col9a1-201ENSMUST00000054588 Hectd4E9Q2E4 4418 aa5.91□□□□□ -1.46
Col9a1-201ENSMUST00000054588 CriptO70333 101 aa5.89□□□□□ -1.47
Col9a1-201ENSMUST00000054588 Gm9821Q8K076 103 aa5.89□□□□□ -1.47
Col9a1-201ENSMUST00000054588 Dnah7cA0A087WR13 4024 aa5.89□□□□□ -1.47
Col9a1-201ENSMUST00000054588 Vps13dB1ART2 4390 aa5.88□□□□□ -1.47
Col9a1-201ENSMUST00000054588 Gm5767A0A0J9YTU8 78 aa5.88□□□□□ -1.47
Col9a1-201ENSMUST00000054588 Stard9Q80TF6 4561 aa5.87□□□□□ -1.47
Col9a1-201ENSMUST00000054588 Pla2g10Q9QXX3 151 aa5.87□□□□□ -1.47
Col9a1-201ENSMUST00000054588 ApobE9Q414 4505 aa5.83□□□□□ -1.48
Col9a1-201ENSMUST00000054588 Lrp1bQ9JI18 4599 aa5.81□□□□□ -1.48
Col9a1-201ENSMUST00000054588 Gm12216A0A1W2P827 62 aa5.81□□□□□ -1.48
Col9a1-201ENSMUST00000054588 Ryr3A2AGL3 4863 aa5.8□□□□□ -1.48
Col9a1-201ENSMUST00000054588 Dnah7aE9Q0T8 4024 aa5.8□□□□□ -1.48
Col9a1-201ENSMUST00000054588 Cox6b2Q80ZN9 88 aa5.79□□□□□ -1.48
Col9a1-201ENSMUST00000054588 2310057N15RikQ9D6T8 200 aa5.79□□□□□ -1.48
Col9a1-201ENSMUST00000054588 Gm11939A2A592 99 aa5.79□□□□□ -1.48
Col9a1-201ENSMUST00000054588 Pkd1O08852 4293 aa5.77□□□□□ -1.49
Col9a1-201ENSMUST00000054588 Gm10382Q3V0T5 144 aa5.73□□□□□ -1.49
Col9a1-201ENSMUST00000054588 Ryr1E9PZQ0 5035 aa5.73□□□□□ -1.49
Col9a1-201ENSMUST00000054588 Gm20537G3UYK7 97 aa5.69□□□□□ -1.5
Col9a1-201ENSMUST00000054588 Gm9955Q8CEJ8 102 aa5.69□□□□□ -1.5
Col9a1-201ENSMUST00000054588 Gm10318A0A1W2P728 225 aa5.69□□□□□ -1.5
Col9a1-201ENSMUST00000054588 Spink7Q6IE32 76 aa5.67□□□□□ -1.5
Col9a1-201ENSMUST00000054588 SacsQ9JLC8 4582 aa5.67□□□□□ -1.5
Col9a1-201ENSMUST00000054588 Krtap19-5O08632 62 aa5.65□□□□□ -1.5
Col9a1-201ENSMUST00000054588 Lrp1Q91ZX7 4545 aaKnown RBP5.65□□□□□ -1.5
Col9a1-201ENSMUST00000054588 Fat2Q5F226 4351 aa5.62□□□□□ -1.51
Col9a1-201ENSMUST00000054588 Rpl37Q9D823 97 aa5.6□□□□□ -1.51
Col9a1-201ENSMUST00000054588 Pkhd1E9PZ36 4059 aa5.6□□□□□ -1.51
Col9a1-201ENSMUST00000054588 Dync1h1Q9JHU4 4644 aaKnown RBP5.6□□□□□ -1.51
Col9a1-201ENSMUST00000054588 Fat3Q8BNA6 4555 aa5.59□□□□□ -1.51
Col9a1-201ENSMUST00000054588 HydinQ80W93 5154 aa5.59□□□□□ -1.52
Col9a1-201ENSMUST00000054588 Fat1A0A1L1SQU7 4645 aa5.58□□□□□ -1.52
Col9a1-201ENSMUST00000054588 Mycbp2Q7TPH6 4711 aa5.54□□□□□ -1.52
Col9a1-201ENSMUST00000054588 Crct1Q6PAI5 102 aa5.54□□□□□ -1.52
Col9a1-201ENSMUST00000054588 Mp68P56379 58 aa5.53□□□□□ -1.52
Col9a1-201ENSMUST00000054588 Sec61bQ9CQS8 96 aaKnown RBP5.52□□□□□ -1.53
Col9a1-201ENSMUST00000054588 Fam229aB2KGE5 128 aa5.49□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms