RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 D6Ertd527eA0A0N4SWI3 464 aa9.7□□□□□ -0.86
Pcdhac2-201ENSMUST00000047479 Gm21887J3QQ04 176 aa9.66□□□□□ -0.86
Pcdhac2-201ENSMUST00000047479 Utp20Q5XG71 2788 aaKnown RBP9.65□□□□□ -0.86
Pcdhac2-201ENSMUST00000047479 Gm5965D3Z724 196 aa9.65□□□□□ -0.86
Pcdhac2-201ENSMUST00000047479 Dchs1E9PVD3 3291 aa9.64□□□□□ -0.87
Pcdhac2-201ENSMUST00000047479 2310057N15RikQ9D6T8 200 aa9.62□□□□□ -0.87
Pcdhac2-201ENSMUST00000047479 Tex15F8VPN2 2785 aa9.62□□□□□ -0.87
Pcdhac2-201ENSMUST00000047479 Wdfy3Q6VNB8 3508 aa9.61□□□□□ -0.87
Pcdhac2-201ENSMUST00000047479 Igfn1Q3KNY0 2849 aa9.59□□□□□ -0.87
Pcdhac2-201ENSMUST00000047479 Myo15aQ9QZZ4 3511 aa9.58□□□□□ -0.88
Pcdhac2-201ENSMUST00000047479 Srrm2Q8BTI8 2703 aaKnown RBP9.5□□□□□ -0.89
Pcdhac2-201ENSMUST00000047479 TgO08710 2766 aa9.48□□□□□ -0.89
Pcdhac2-201ENSMUST00000047479 Zfhx3Q61329 3726 aa9.47□□□□□ -0.89
Pcdhac2-201ENSMUST00000047479 SpegQ62407 3262 aa9.46□□□□□ -0.89
Pcdhac2-201ENSMUST00000047479 Zzef1Q5SSH7 2924 aa9.46□□□□□ -0.89
Pcdhac2-201ENSMUST00000047479 Tenm4Q3UHK6 2771 aa9.46□□□□□ -0.9
Pcdhac2-201ENSMUST00000047479 SmcpP15265 143 aa9.44□□□□□ -0.9
Pcdhac2-201ENSMUST00000047479 RelnQ60841 3461 aa9.43□□□□□ -0.9
Pcdhac2-201ENSMUST00000047479 Tnp1P10856 55 aa9.39□□□□□ -0.91
Pcdhac2-201ENSMUST00000047479 DspE9Q557 2883 aaKnown RBP9.37□□□□□ -0.91
Pcdhac2-201ENSMUST00000047479 ApcQ61315 2845 aa9.37□□□□□ -0.91
Pcdhac2-201ENSMUST00000047479 FlncQ8VHX6 2726 aaKnown RBP9.34□□□□□ -0.91
Pcdhac2-201ENSMUST00000047479 A930033H14RikG5E8X6 103 aa9.33□□□□□ -0.92
Pcdhac2-201ENSMUST00000047479 Trank1Q8BV79 2999 aa9.32□□□□□ -0.92
Pcdhac2-201ENSMUST00000047479 DmdP11531 3678 aa9.32□□□□□ -0.92
Pcdhac2-201ENSMUST00000047479 Ndufaf8A2AMZ4 74 aa9.32□□□□□ -0.92
Pcdhac2-201ENSMUST00000047479 Celsr2Q9R0M0 2920 aa9.3□□□□□ -0.92
Pcdhac2-201ENSMUST00000047479 Vps13cQ8BX70 3748 aa9.29□□□□□ -0.92
Pcdhac2-201ENSMUST00000047479 Chd9Q8BYH8 2885 aa9.25□□□□□ -0.93
Pcdhac2-201ENSMUST00000047479 Akap9Q70FJ1 3797 aa9.25□□□□□ -0.93
Pcdhac2-201ENSMUST00000047479 Gm40193A0A1B0GT39 78 aa9.18□□□□□ -0.94
Pcdhac2-201ENSMUST00000047479 Pdzd2E9Q1M1 2796 aa9.16□□□□□ -0.94
Pcdhac2-201ENSMUST00000047479 LrbaQ9ESE1 2856 aa9.09□□□□□ -0.95
Pcdhac2-201ENSMUST00000047479 Gm20537G3UYK7 97 aa9.09□□□□□ -0.95
Pcdhac2-201ENSMUST00000047479 Tenm3Q9WTS6 2715 aa9.08□□□□□ -0.96
Pcdhac2-201ENSMUST00000047479 Nf1Q04690 2841 aa9.07□□□□□ -0.96
Pcdhac2-201ENSMUST00000047479 B930094E09RikQ8C4T2 136 aa9.06□□□□□ -0.96
Pcdhac2-201ENSMUST00000047479 Muc5acE9QAQ8 3455 aa9.05□□□□□ -0.96
Pcdhac2-201ENSMUST00000047479 Gm9112A2AI92 75 aa8.98□□□□□ -0.97
Pcdhac2-201ENSMUST00000047479 Gm9736A0A1W2P7N1 277 aa8.97□□□□□ -0.97
Pcdhac2-201ENSMUST00000047479 Csmd1Q923L3 3564 aa8.95□□□□□ -0.98
Pcdhac2-201ENSMUST00000047479 Tenm1Q9WTS4 2731 aa8.93□□□□□ -0.98
Pcdhac2-201ENSMUST00000047479 Gm17416Q30KP4 66 aa8.91□□□□□ -0.98
Pcdhac2-201ENSMUST00000047479 Smg1Q8BKX6 3658 aaKnown RBP8.9□□□□□ -0.98
Pcdhac2-201ENSMUST00000047479 2310079G19RikQ9D6L6 185 aa8.87□□□□□ -0.99
Pcdhac2-201ENSMUST00000047479 Lama5Q61001 3718 aa8.86□□□□□ -0.99
Pcdhac2-201ENSMUST00000047479 Tenm2Q9WTS5 2764 aa8.85□□□□□ -0.99
Pcdhac2-201ENSMUST00000047479 SpenQ62504 3644 aaKnown RBP8.82□□□□□ -1
Pcdhac2-201ENSMUST00000047479 Helz2E9QAM5 2947 aaKnown RBP8.8□□□□□ -1
Pcdhac2-201ENSMUST00000047479 Gm9918Q8BUR5 174 aa8.79□□□□□ -1
Pcdhac2-201ENSMUST00000047479 Zfhx4Q9JJN2 3550 aa8.79□□□□□ -1
Pcdhac2-201ENSMUST00000047479 2210017I01RikA0A0A6YVV1 95 aa8.76□□□□□ -1.01
Pcdhac2-201ENSMUST00000047479 Prm2P07978 107 aa8.74□□□□□ -1.01
Pcdhac2-201ENSMUST00000047479 OtogO55225 2910 aa8.7□□□□□ -1.02
Pcdhac2-201ENSMUST00000047479 Gm884A2A9H6 3643 aa8.66□□□□□ -1.02
Pcdhac2-201ENSMUST00000047479 Megf8P60882 2789 aa8.66□□□□□ -1.02
Pcdhac2-201ENSMUST00000047479 Gm17402F6Z0L5 76 aa8.62□□□□□ -1.03
Pcdhac2-201ENSMUST00000047479 Gm10318A0A1W2P728 225 aa8.57□□□□□ -1.04
Pcdhac2-201ENSMUST00000047479 Svep1A2AVA0 3567 aa8.49□□□□□ -1.05
Pcdhac2-201ENSMUST00000047479 Krtap19-5O08632 62 aa8.43□□□□□ -1.06
Pcdhac2-201ENSMUST00000047479 Gm19668J3QMD1 248 aa8.43□□□□□ -1.06
Pcdhac2-201ENSMUST00000047479 Crct1Q6PAI5 102 aa8.41□□□□□ -1.06
Pcdhac2-201ENSMUST00000047479 Cmya5Q70KF4 3739 aa8.41□□□□□ -1.06
Pcdhac2-201ENSMUST00000047479 Gm11939A2A592 99 aa8.37□□□□□ -1.07
Pcdhac2-201ENSMUST00000047479 Fbn1Q61554 2873 aaKnown RBP8.36□□□□□ -1.07
Pcdhac2-201ENSMUST00000047479 Krtap13-1Q8K198 168 aa8.33□□□□□ -1.08
Pcdhac2-201ENSMUST00000047479 VwfQ8CIZ8 2813 aa8.28□□□□□ -1.08
Pcdhac2-201ENSMUST00000047479 4933428G20RikQ9D3X4 101 aa8.28□□□□□ -1.08
Pcdhac2-201ENSMUST00000047479 Muc4Q8JZM8 3443 aa8.24□□□□□ -1.09
Pcdhac2-201ENSMUST00000047479 Csmd2V9GX34 3611 aa8.21□□□□□ -1.1
Pcdhac2-201ENSMUST00000047479 Col7a1Q63870 2944 aa8.2□□□□□ -1.1
Pcdhac2-201ENSMUST00000047479 Ank2Q8C8R3 3898 aa8.13□□□□□ -1.11
Pcdhac2-201ENSMUST00000047479 Krtap3-1A2A591 98 aa8.04□□□□□ -1.12
Pcdhac2-201ENSMUST00000047479 Krtap3-2Q9D638 99 aa7.96□□□□□ -1.14
Pcdhac2-201ENSMUST00000047479 Krtap3-3Q9D7P0 99 aa7.96□□□□□ -1.14
Pcdhac2-201ENSMUST00000047479 Muc6Q80T03 2850 aa7.88□□□□□ -1.15
Pcdhac2-201ENSMUST00000047479 Gm6358A0A087WPH4 74 aa7.82□□□□□ -1.16
Pcdhac2-201ENSMUST00000047479 LystP97412 3788 aa7.78□□□□□ -1.16
Pcdhac2-201ENSMUST00000047479 Dnah14A0A140LIJ4 4489 aa7.72□□□□□ -1.17
Pcdhac2-201ENSMUST00000047479 CubnQ9JLB4 3623 aa7.72□□□□□ -1.17
Pcdhac2-201ENSMUST00000047479 Krtap8-1O08633 61 aa7.63□□□□□ -1.19
Pcdhac2-201ENSMUST00000047479 Gm18596A0A1W2P860 280 aa7.62□□□□□ -1.19
Pcdhac2-201ENSMUST00000047479 Huwe1Q7TMY8 4377 aaKnown RBP7.6□□□□□ -1.19
Pcdhac2-201ENSMUST00000047479 Krtap19-9aF8WH65 55 aa7.58□□□□□ -1.2
Pcdhac2-201ENSMUST00000047479 Krtap1-5A2A590 122 aa7.58□□□□□ -1.2
Pcdhac2-201ENSMUST00000047479 Sprr2kO70562 68 aa7.55□□□□□ -1.2
Pcdhac2-201ENSMUST00000047479 LorP18165 486 aa7.5□□□□□ -1.21
Pcdhac2-201ENSMUST00000047479 Krtap7-1Q9D3I6 87 aa7.5□□□□□ -1.21
Pcdhac2-201ENSMUST00000047479 Sprr2a3Q4KL71 83 aa7.48□□□□□ -1.21
Pcdhac2-201ENSMUST00000047479 Sprr2a1Q9CQK8 83 aa7.48□□□□□ -1.21
Pcdhac2-201ENSMUST00000047479 BsnO88737 3942 aa7.46□□□□□ -1.21
Pcdhac2-201ENSMUST00000047479 Dnah10D3YYQ8 4591 aa7.42□□□□□ -1.22
Pcdhac2-201ENSMUST00000047479 Krtap1-4Q3V2D6 188 aa7.42□□□□□ -1.22
Pcdhac2-201ENSMUST00000047479 Xirp2Q4U4S6 3784 aa7.42□□□□□ -1.22
Pcdhac2-201ENSMUST00000047479 Hspg2Q05793 3707 aaKnown RBP7.38□□□□□ -1.23
Pcdhac2-201ENSMUST00000047479 Csmd3Q80T79 3707 aa7.36□□□□□ -1.23
Pcdhac2-201ENSMUST00000047479 Gm19402J3QJV4 266 aa7.34□□□□□ -1.23
Pcdhac2-201ENSMUST00000047479 Krtap19-9bQ99NG9 58 aa7.31□□□□□ -1.24
Pcdhac2-201ENSMUST00000047479 Dnah5Q8VHE6 4621 aa7.3□□□□□ -1.24
Pcdhac2-201ENSMUST00000047479 Krtap12-1Q9Z287 130 aa7.22□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 108.2 ms