RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 TgO08710 2766 aa5.68□□□□□ -1.5
Syne1-201ENSMUST00000041639 Krtap14O08640 167 aa5.67□□□□□ -1.5
Syne1-201ENSMUST00000041639 Gm19426M0QWC7 77 aa5.65□□□□□ -1.51
Syne1-201ENSMUST00000041639 Chd9Q8BYH8 2885 aa5.64□□□□□ -1.51
Syne1-201ENSMUST00000041639 2310061N02RikQ9D6S9 174 aa5.63□□□□□ -1.51
Syne1-201ENSMUST00000041639 Trank1Q8BV79 2999 aa5.62□□□□□ -1.51
Syne1-201ENSMUST00000041639 Dchs1E9PVD3 3291 aa5.61□□□□□ -1.51
Syne1-201ENSMUST00000041639 Krtap10-10A0A1W2P7T6 217 aa5.61□□□□□ -1.51
Syne1-201ENSMUST00000041639 Wdfy3Q6VNB8 3508 aa5.6□□□□□ -1.51
Syne1-201ENSMUST00000041639 DmdP11531 3678 aa5.59□□□□□ -1.51
Syne1-201ENSMUST00000041639 FlncQ8VHX6 2726 aaKnown RBP5.57□□□□□ -1.52
Syne1-201ENSMUST00000041639 Cox6b2Q80ZN9 88 aa5.56□□□□□ -1.52
Syne1-201ENSMUST00000041639 SpegQ62407 3262 aa5.55□□□□□ -1.52
Syne1-201ENSMUST00000041639 VcanQ62059 3357 aa5.53□□□□□ -1.52
Syne1-201ENSMUST00000041639 Tnp2P11378 117 aa5.52□□□□□ -1.53
Syne1-201ENSMUST00000041639 Pdzd2E9Q1M1 2796 aa5.52□□□□□ -1.53
Syne1-201ENSMUST00000041639 LrbaQ9ESE1 2856 aa5.52□□□□□ -1.53
Syne1-201ENSMUST00000041639 Myo15aQ9QZZ4 3511 aa5.49□□□□□ -1.53
Syne1-201ENSMUST00000041639 D6Ertd527eA0A0N4SWI3 464 aa5.49□□□□□ -1.53
Syne1-201ENSMUST00000041639 Nf1Q04690 2841 aa5.49□□□□□ -1.53
Syne1-201ENSMUST00000041639 Rps29P62274 56 aa5.48□□□□□ -1.53
Syne1-201ENSMUST00000041639 Zfhx3Q61329 3726 aa5.46□□□□□ -1.53
Syne1-201ENSMUST00000041639 Gm2696A0A1W2P709 240 aa5.45□□□□□ -1.54
Syne1-201ENSMUST00000041639 Tenm4Q3UHK6 2771 aa5.44□□□□□ -1.54
Syne1-201ENSMUST00000041639 Helz2E9QAM5 2947 aaKnown RBP5.41□□□□□ -1.54
Syne1-201ENSMUST00000041639 Ndufaf8A2AMZ4 74 aa5.4□□□□□ -1.54
Syne1-201ENSMUST00000041639 Tenm1Q9WTS4 2731 aa5.4□□□□□ -1.55
Syne1-201ENSMUST00000041639 RelnQ60841 3461 aa5.37□□□□□ -1.55
Syne1-201ENSMUST00000041639 Tenm3Q9WTS6 2715 aa5.36□□□□□ -1.55
Syne1-201ENSMUST00000041639 Gm21887J3QQ04 176 aa5.34□□□□□ -1.56
Syne1-201ENSMUST00000041639 Gm5965D3Z724 196 aa5.33□□□□□ -1.56
Syne1-201ENSMUST00000041639 Akap9Q70FJ1 3797 aa5.31□□□□□ -1.56
Syne1-201ENSMUST00000041639 2310057N15RikQ9D6T8 200 aa5.27□□□□□ -1.57
Syne1-201ENSMUST00000041639 Muc5acE9QAQ8 3455 aa5.27□□□□□ -1.57
Syne1-201ENSMUST00000041639 Gm20537G3UYK7 97 aa5.24□□□□□ -1.57
Syne1-201ENSMUST00000041639 Vps13cQ8BX70 3748 aa5.22□□□□□ -1.57
Syne1-201ENSMUST00000041639 Gm9112A2AI92 75 aa5.21□□□□□ -1.57
Syne1-201ENSMUST00000041639 Gm884A2A9H6 3643 aa5.21□□□□□ -1.58
Syne1-201ENSMUST00000041639 OtogO55225 2910 aa5.21□□□□□ -1.58
Syne1-201ENSMUST00000041639 Csmd1Q923L3 3564 aa5.2□□□□□ -1.58
Syne1-201ENSMUST00000041639 Tnp1P10856 55 aa5.2□□□□□ -1.58
Syne1-201ENSMUST00000041639 Zfhx4Q9JJN2 3550 aa5.17□□□□□ -1.58
Syne1-201ENSMUST00000041639 Tenm2Q9WTS5 2764 aa5.16□□□□□ -1.58
Syne1-201ENSMUST00000041639 SpenQ62504 3644 aaKnown RBP5.15□□□□□ -1.58
Syne1-201ENSMUST00000041639 Gm40193A0A1B0GT39 78 aa5.15□□□□□ -1.59
Syne1-201ENSMUST00000041639 Megf8P60882 2789 aa5.13□□□□□ -1.59
Syne1-201ENSMUST00000041639 B930094E09RikQ8C4T2 136 aa5.1□□□□□ -1.59
Syne1-201ENSMUST00000041639 2310079G19RikQ9D6L6 185 aa5.08□□□□□ -1.6
Syne1-201ENSMUST00000041639 A930033H14RikG5E8X6 103 aa5.07□□□□□ -1.6
Syne1-201ENSMUST00000041639 VwfQ8CIZ8 2813 aa5.07□□□□□ -1.6
Syne1-201ENSMUST00000041639 Smg1Q8BKX6 3658 aaKnown RBP5.07□□□□□ -1.6
Syne1-201ENSMUST00000041639 Gm9736A0A1W2P7N1 277 aa4.98□□□□□ -1.61
Syne1-201ENSMUST00000041639 Lama5Q61001 3718 aa4.98□□□□□ -1.61
Syne1-201ENSMUST00000041639 Gm17416Q30KP4 66 aa4.93□□□□□ -1.62
Syne1-201ENSMUST00000041639 Col7a1Q63870 2944 aa4.92□□□□□ -1.62
Syne1-201ENSMUST00000041639 2210017I01RikA0A0A6YVV1 95 aa4.87□□□□□ -1.63
Syne1-201ENSMUST00000041639 Fbn1Q61554 2873 aaKnown RBP4.86□□□□□ -1.63
Syne1-201ENSMUST00000041639 Cmya5Q70KF4 3739 aa4.86□□□□□ -1.63
Syne1-201ENSMUST00000041639 Gm9918Q8BUR5 174 aa4.85□□□□□ -1.63
Syne1-201ENSMUST00000041639 Prm2P07978 107 aa4.83□□□□□ -1.64
Syne1-201ENSMUST00000041639 Svep1A2AVA0 3567 aa4.79□□□□□ -1.64
Syne1-201ENSMUST00000041639 Gm17402F6Z0L5 76 aa4.79□□□□□ -1.64
Syne1-201ENSMUST00000041639 Gm10318A0A1W2P728 225 aa4.77□□□□□ -1.65
Syne1-201ENSMUST00000041639 Muc4Q8JZM8 3443 aa4.75□□□□□ -1.65
Syne1-201ENSMUST00000041639 Gm11939A2A592 99 aa4.74□□□□□ -1.65
Syne1-201ENSMUST00000041639 Csmd2V9GX34 3611 aa4.7□□□□□ -1.66
Syne1-201ENSMUST00000041639 Muc6Q80T03 2850 aa4.68□□□□□ -1.66
Syne1-201ENSMUST00000041639 Gm19668J3QMD1 248 aa4.67□□□□□ -1.66
Syne1-201ENSMUST00000041639 Krtap13-1Q8K198 168 aa4.65□□□□□ -1.66
Syne1-201ENSMUST00000041639 Crct1Q6PAI5 102 aa4.65□□□□□ -1.67
Syne1-201ENSMUST00000041639 Krtap19-5O08632 62 aa4.64□□□□□ -1.67
Syne1-201ENSMUST00000041639 Krtap3-2Q9D638 99 aa4.58□□□□□ -1.68
Syne1-201ENSMUST00000041639 Krtap3-3Q9D7P0 99 aa4.58□□□□□ -1.68
Syne1-201ENSMUST00000041639 LystP97412 3788 aa4.57□□□□□ -1.68
Syne1-201ENSMUST00000041639 Krtap3-1A2A591 98 aa4.55□□□□□ -1.68
Syne1-201ENSMUST00000041639 Ank2Q8C8R3 3898 aa4.54□□□□□ -1.68
Syne1-201ENSMUST00000041639 4933428G20RikQ9D3X4 101 aa4.53□□□□□ -1.68
Syne1-201ENSMUST00000041639 CubnQ9JLB4 3623 aa4.51□□□□□ -1.69
Syne1-201ENSMUST00000041639 BsnO88737 3942 aa4.49□□□□□ -1.69
Syne1-201ENSMUST00000041639 Xirp2Q4U4S6 3784 aa4.42□□□□□ -1.7
Syne1-201ENSMUST00000041639 Csmd3Q80T79 3707 aa4.36□□□□□ -1.71
Syne1-201ENSMUST00000041639 Dnah14A0A140LIJ4 4489 aa4.29□□□□□ -1.72
Syne1-201ENSMUST00000041639 Gm6358A0A087WPH4 74 aa4.29□□□□□ -1.72
Syne1-201ENSMUST00000041639 Hspg2Q05793 3707 aaKnown RBP4.27□□□□□ -1.73
Syne1-201ENSMUST00000041639 Huwe1Q7TMY8 4377 aaKnown RBP4.25□□□□□ -1.73
Syne1-201ENSMUST00000041639 Dnah10D3YYQ8 4591 aa4.23□□□□□ -1.73
Syne1-201ENSMUST00000041639 Sprr2a3Q4KL71 83 aa4.22□□□□□ -1.73
Syne1-201ENSMUST00000041639 Sprr2a1Q9CQK8 83 aa4.22□□□□□ -1.73
Syne1-201ENSMUST00000041639 Krtap1-5A2A590 122 aa4.2□□□□□ -1.74
Syne1-201ENSMUST00000041639 Krtap7-1Q9D3I6 87 aa4.19□□□□□ -1.74
Syne1-201ENSMUST00000041639 Krtap19-9aF8WH65 55 aa4.17□□□□□ -1.74
Syne1-201ENSMUST00000041639 Dnah5Q8VHE6 4621 aa4.11□□□□□ -1.75
Syne1-201ENSMUST00000041639 Krtap1-4Q3V2D6 188 aa4.11□□□□□ -1.75
Syne1-201ENSMUST00000041639 LorP18165 486 aa4.09□□□□□ -1.75
Syne1-201ENSMUST00000041639 Krtap8-1O08633 61 aa4.09□□□□□ -1.76
Syne1-201ENSMUST00000041639 Gm19402J3QJV4 266 aa4.08□□□□□ -1.76
Syne1-201ENSMUST00000041639 Krtap19-9bQ99NG9 58 aa4.05□□□□□ -1.76
Syne1-201ENSMUST00000041639 Vps13dB1ART2 4390 aa4.03□□□□□ -1.76
Syne1-201ENSMUST00000041639 Gm18596A0A1W2P860 280 aa4.01□□□□□ -1.77
Syne1-201ENSMUST00000041639 Stard9Q80TF6 4561 aa4.01□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 133.6 ms