RNA–Protein interactions for RNA: ENSMUST00000039267.9

Chd7-201, Transcript of Chromodomain-helicase-DNA-binding protein 7, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Chd7, Length 9,444 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7-201ENSMUST00000039267 Gm7137J3QMW1 236 aa6.75□□□□□ -1.33
Chd7-201ENSMUST00000039267 Trank1Q8BV79 2999 aa6.73□□□□□ -1.33
Chd7-201ENSMUST00000039267 Rev3lQ61493 3122 aa6.72□□□□□ -1.33
Chd7-201ENSMUST00000039267 Cdh23Q99PF4 3354 aa6.71□□□□□ -1.34
Chd7-201ENSMUST00000039267 AspmQ8CJ27 3122 aa6.68□□□□□ -1.34
Chd7-201ENSMUST00000039267 Gm5965D3Z724 196 aa6.68□□□□□ -1.34
Chd7-201ENSMUST00000039267 Frem2Q6NVD0 3160 aa6.67□□□□□ -1.34
Chd7-201ENSMUST00000039267 Prm2P07978 107 aa6.67□□□□□ -1.34
Chd7-201ENSMUST00000039267 HttP42859 3119 aa6.66□□□□□ -1.34
Chd7-201ENSMUST00000039267 Col12a1Q60847 3120 aa6.66□□□□□ -1.34
Chd7-201ENSMUST00000039267 Celsr1O35161 3034 aa6.66□□□□□ -1.34
Chd7-201ENSMUST00000039267 2310061N02RikQ9D6S9 174 aa6.65□□□□□ -1.34
Chd7-201ENSMUST00000039267 Dmxl2Q8BPN8 3032 aa6.64□□□□□ -1.35
Chd7-201ENSMUST00000039267 DmdP11531 3678 aa6.64□□□□□ -1.35
Chd7-201ENSMUST00000039267 B930094E09RikQ8C4T2 136 aa6.63□□□□□ -1.35
Chd7-201ENSMUST00000039267 Unc80Q8BLN6 3261 aa6.63□□□□□ -1.35
Chd7-201ENSMUST00000039267 2310057N15RikQ9D6T8 200 aa6.62□□□□□ -1.35
Chd7-201ENSMUST00000039267 Gm36176A0A1W2P8D5 158 aa6.6□□□□□ -1.35
Chd7-201ENSMUST00000039267 Megf8P60882 2789 aa6.59□□□□□ -1.35
Chd7-201ENSMUST00000039267 Akap9Q70FJ1 3797 aa6.52□□□□□ -1.37
Chd7-201ENSMUST00000039267 Zfhx3Q61329 3726 aa6.51□□□□□ -1.37
Chd7-201ENSMUST00000039267 Vps13cQ8BX70 3748 aa6.49□□□□□ -1.37
Chd7-201ENSMUST00000039267 A930033H14RikG5E8X6 103 aa6.48□□□□□ -1.37
Chd7-201ENSMUST00000039267 Myo15aQ9QZZ4 3511 aa6.48□□□□□ -1.37
Chd7-201ENSMUST00000039267 Szt2A2A9C3 3431 aa6.46□□□□□ -1.38
Chd7-201ENSMUST00000039267 Wdfy3Q6VNB8 3508 aa6.45□□□□□ -1.38
Chd7-201ENSMUST00000039267 Adgrg4B7ZCC9 3073 aa6.45□□□□□ -1.38
Chd7-201ENSMUST00000039267 2310079G19RikQ9D6L6 185 aa6.44□□□□□ -1.38
Chd7-201ENSMUST00000039267 Gm17402F6Z0L5 76 aa6.43□□□□□ -1.38
Chd7-201ENSMUST00000039267 SpenQ62504 3644 aaKnown RBP6.43□□□□□ -1.38
Chd7-201ENSMUST00000039267 Celsr3Q91ZI0 3301 aa6.42□□□□□ -1.38
Chd7-201ENSMUST00000039267 Lrrc37aB1AWG4 3215 aa6.42□□□□□ -1.38
Chd7-201ENSMUST00000039267 Helz2E9QAM5 2947 aaKnown RBP6.37□□□□□ -1.39
Chd7-201ENSMUST00000039267 VwfQ8CIZ8 2813 aa6.37□□□□□ -1.39
Chd7-201ENSMUST00000039267 Gm9507D3Z5T3 223 aa6.36□□□□□ -1.39
Chd7-201ENSMUST00000039267 Brca2P97929 3329 aa6.35□□□□□ -1.39
Chd7-201ENSMUST00000039267 Gm17416Q30KP4 66 aa6.34□□□□□ -1.4
Chd7-201ENSMUST00000039267 Tenm4Q3UHK6 2771 aa6.32□□□□□ -1.4
Chd7-201ENSMUST00000039267 Gm884A2A9H6 3643 aa6.32□□□□□ -1.4
Chd7-201ENSMUST00000039267 Dchs2A0A0A6YW72 3346 aa6.28□□□□□ -1.4
Chd7-201ENSMUST00000039267 4933428G20RikQ9D3X4 101 aa6.28□□□□□ -1.4
Chd7-201ENSMUST00000039267 OtogO55225 2910 aa6.27□□□□□ -1.4
Chd7-201ENSMUST00000039267 VcanQ62059 3357 aa6.27□□□□□ -1.41
Chd7-201ENSMUST00000039267 Krtap10-4Q08EG8 221 aa6.24□□□□□ -1.41
Chd7-201ENSMUST00000039267 Col6a3E9PWQ3 3284 aa6.21□□□□□ -1.41
Chd7-201ENSMUST00000039267 Tenm2Q9WTS5 2764 aa6.21□□□□□ -1.42
Chd7-201ENSMUST00000039267 Cmya5Q70KF4 3739 aa6.18□□□□□ -1.42
Chd7-201ENSMUST00000039267 Krtap10-10A0A1W2P7T6 217 aa6.18□□□□□ -1.42
Chd7-201ENSMUST00000039267 2210017I01RikA0A0A6YVV1 95 aa6.15□□□□□ -1.42
Chd7-201ENSMUST00000039267 Csmd1Q923L3 3564 aa6.15□□□□□ -1.43
Chd7-201ENSMUST00000039267 Fbn1Q61554 2873 aaKnown RBP6.11□□□□□ -1.43
Chd7-201ENSMUST00000039267 Ank2Q8C8R3 3898 aa6.1□□□□□ -1.43
Chd7-201ENSMUST00000039267 Dchs1E9PVD3 3291 aa6.07□□□□□ -1.44
Chd7-201ENSMUST00000039267 Smg1Q8BKX6 3658 aaKnown RBP6.07□□□□□ -1.44
Chd7-201ENSMUST00000039267 Gm2696A0A1W2P709 240 aa6.04□□□□□ -1.44
Chd7-201ENSMUST00000039267 Zfhx4Q9JJN2 3550 aa5.99□□□□□ -1.45
Chd7-201ENSMUST00000039267 Gm19668J3QMD1 248 aa5.98□□□□□ -1.45
Chd7-201ENSMUST00000039267 SpegQ62407 3262 aa5.95□□□□□ -1.46
Chd7-201ENSMUST00000039267 Lama5Q61001 3718 aa5.94□□□□□ -1.46
Chd7-201ENSMUST00000039267 RelnQ60841 3461 aa5.88□□□□□ -1.47
Chd7-201ENSMUST00000039267 Col7a1Q63870 2944 aa5.84□□□□□ -1.47
Chd7-201ENSMUST00000039267 LystP97412 3788 aa5.8□□□□□ -1.48
Chd7-201ENSMUST00000039267 BsnO88737 3942 aa5.72□□□□□ -1.49
Chd7-201ENSMUST00000039267 Muc5acE9QAQ8 3455 aa5.69□□□□□ -1.5
Chd7-201ENSMUST00000039267 Muc6Q80T03 2850 aa5.69□□□□□ -1.5
Chd7-201ENSMUST00000039267 Krtap13-1Q8K198 168 aa5.67□□□□□ -1.5
Chd7-201ENSMUST00000039267 Gm9918Q8BUR5 174 aa5.67□□□□□ -1.5
Chd7-201ENSMUST00000039267 Xirp2Q4U4S6 3784 aa5.66□□□□□ -1.5
Chd7-201ENSMUST00000039267 Svep1A2AVA0 3567 aa5.63□□□□□ -1.51
Chd7-201ENSMUST00000039267 Gm11939A2A592 99 aa5.62□□□□□ -1.51
Chd7-201ENSMUST00000039267 Krtap3-1A2A591 98 aa5.57□□□□□ -1.52
Chd7-201ENSMUST00000039267 Muc4Q8JZM8 3443 aa5.56□□□□□ -1.52
Chd7-201ENSMUST00000039267 Gm9736A0A1W2P7N1 277 aa5.56□□□□□ -1.52
Chd7-201ENSMUST00000039267 Krtap3-2Q9D638 99 aa5.51□□□□□ -1.53
Chd7-201ENSMUST00000039267 Krtap3-3Q9D7P0 99 aa5.51□□□□□ -1.53
Chd7-201ENSMUST00000039267 Csmd2V9GX34 3611 aa5.49□□□□□ -1.53
Chd7-201ENSMUST00000039267 Krtap7-1Q9D3I6 87 aa5.42□□□□□ -1.54
Chd7-201ENSMUST00000039267 Sprr2a3Q4KL71 83 aa5.29□□□□□ -1.56
Chd7-201ENSMUST00000039267 Sprr2a1Q9CQK8 83 aa5.29□□□□□ -1.56
Chd7-201ENSMUST00000039267 Krtap19-5O08632 62 aa5.27□□□□□ -1.57
Chd7-201ENSMUST00000039267 Gm6358A0A087WPH4 74 aa5.23□□□□□ -1.57
Chd7-201ENSMUST00000039267 Gm10318A0A1W2P728 225 aa5.21□□□□□ -1.58
Chd7-201ENSMUST00000039267 Krtap1-5A2A590 122 aa5.21□□□□□ -1.58
Chd7-201ENSMUST00000039267 Csmd3Q80T79 3707 aa5.2□□□□□ -1.58
Chd7-201ENSMUST00000039267 Krtap19-9aF8WH65 55 aa5.2□□□□□ -1.58
Chd7-201ENSMUST00000039267 Hspg2Q05793 3707 aaKnown RBP5.19□□□□□ -1.58
Chd7-201ENSMUST00000039267 CubnQ9JLB4 3623 aa5.18□□□□□ -1.58
Chd7-201ENSMUST00000039267 Krtap19-9bQ99NG9 58 aa5.17□□□□□ -1.58
Chd7-201ENSMUST00000039267 Dnah3Q8BW94 4083 aa5.17□□□□□ -1.58
Chd7-201ENSMUST00000039267 Crct1Q6PAI5 102 aa5.17□□□□□ -1.58
Chd7-201ENSMUST00000039267 Dnah7bL7N1Y0 4068 aa5.13□□□□□ -1.59
Chd7-201ENSMUST00000039267 Gm18596A0A1W2P860 280 aa5.09□□□□□ -1.59
Chd7-201ENSMUST00000039267 Krtap8-1O08633 61 aa5.05□□□□□ -1.6
Chd7-201ENSMUST00000039267 Kmt2aP55200 3966 aa5.01□□□□□ -1.61
Chd7-201ENSMUST00000039267 Krtap12-1Q9Z287 130 aa5□□□□□ -1.61
Chd7-201ENSMUST00000039267 Dnah7cA0A087WR13 4024 aa4.96□□□□□ -1.61
Chd7-201ENSMUST00000039267 Krtap1-4Q3V2D6 188 aa4.96□□□□□ -1.62
Chd7-201ENSMUST00000039267 Gm19402J3QJV4 266 aa4.95□□□□□ -1.62
Chd7-201ENSMUST00000039267 Dnah7aE9Q0T8 4024 aa4.91□□□□□ -1.62
Chd7-201ENSMUST00000039267 Vps13bQ80TY5 3993 aa4.89□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms