RNA–Protein interactions for RNA: ENSMUST00000028382.12

Nup35-201, Transcript of Nucleoporin NUP53, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup35, Length 1,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35-201ENSMUST00000028382 Gm16253D3Z167 63 aa9.05□□□□□ -0.96
Nup35-201ENSMUST00000028382 Gm9736A0A1W2P7N1 277 aa9.04□□□□□ -0.96
Nup35-201ENSMUST00000028382 Gtf2h5Q8K2X8 71 aa9.04□□□□□ -0.96
Nup35-201ENSMUST00000028382 Gm37013Q8K491 104 aa9.04□□□□□ -0.96
Nup35-201ENSMUST00000028382 Igkv8-21A0A140T8P7 120 aa9.03□□□□□ -0.96
Nup35-201ENSMUST00000028382 Tmem213Q08EA8 116 aa9.03□□□□□ -0.96
Nup35-201ENSMUST00000028382 C130032M10RikQ8C888 123 aa9.03□□□□□ -0.96
Nup35-201ENSMUST00000028382 Mrpl34Q99N91 92 aa9.03□□□□□ -0.96
Nup35-201ENSMUST00000028382 Cdip1Q9DB75 208 aa9.01□□□□□ -0.97
Nup35-201ENSMUST00000028382 Gm21886J3QJU9 214 aa9□□□□□ -0.97
Nup35-201ENSMUST00000028382 Dph3Q8K0W9 82 aa8.99□□□□□ -0.97
Nup35-201ENSMUST00000028382 UqcrqQ9CQ69 82 aa8.99□□□□□ -0.97
Nup35-201ENSMUST00000028382 Cby1Q9D1C2 127 aa8.99□□□□□ -0.97
Nup35-201ENSMUST00000028382 Mycbp2Q7TPH6 4711 aa8.98□□□□□ -0.97
Nup35-201ENSMUST00000028382 HydinQ80W93 5154 aa8.97□□□□□ -0.97
Nup35-201ENSMUST00000028382 Gm45213A0A0U1RNZ6 101 aa8.96□□□□□ -0.97
Nup35-201ENSMUST00000028382 MplkipQ9D011 178 aa8.96□□□□□ -0.97
Nup35-201ENSMUST00000028382 Gm17689B3GLJ4 109 aa8.95□□□□□ -0.98
Nup35-201ENSMUST00000028382 Fam240bJ3QMB3 78 aa8.95□□□□□ -0.98
Nup35-201ENSMUST00000028382 Gm2310J3QNJ2 377 aa8.95□□□□□ -0.98
Nup35-201ENSMUST00000028382 Ubl5Q9EPV8 73 aa8.91□□□□□ -0.98
Nup35-201ENSMUST00000028382 Lyrm7Q9DA03 104 aa8.9□□□□□ -0.99
Nup35-201ENSMUST00000028382 Gm20604F8WIA3 75 aa8.87□□□□□ -0.99
Nup35-201ENSMUST00000028382 Rps29P62274 56 aa8.87□□□□□ -0.99
Nup35-201ENSMUST00000028382 Reg3aO09037 175 aa8.86□□□□□ -0.99
Nup35-201ENSMUST00000028382 PcloQ9QYX7 5068 aa8.84□□□□□ -0.99
Nup35-201ENSMUST00000028382 Trav3-1Q5R1I8 114 aa8.83□□□□□ -1
Nup35-201ENSMUST00000028382 Igkv8-19A0A0G2JFN8 121 aa8.81□□□□□ -1
Nup35-201ENSMUST00000028382 Tmem254aP0DN89 123 aa8.81□□□□□ -1
Nup35-201ENSMUST00000028382 Tmem254bP0DN90 123 aa8.81□□□□□ -1
Nup35-201ENSMUST00000028382 Tmem254cP0DN91 123 aa8.81□□□□□ -1
Nup35-201ENSMUST00000028382 BatfO35284 125 aa8.79□□□□□ -1
Nup35-201ENSMUST00000028382 Defa21Q8C1P2 93 aa8.79□□□□□ -1
Nup35-201ENSMUST00000028382 Cypt15B1AXS0 87 aa8.77□□□□□ -1.01
Nup35-201ENSMUST00000028382 Gm5965D3Z724 196 aa8.73□□□□□ -1.01
Nup35-201ENSMUST00000028382 Lrp2A2ARV4 4660 aa8.73□□□□□ -1.01
Nup35-201ENSMUST00000028382 Prr15lQ8JZM2 100 aa8.71□□□□□ -1.02
Nup35-201ENSMUST00000028382 Hist1h4aP62806 103 aaKnown RBP8.7□□□□□ -1.02
Nup35-201ENSMUST00000028382 Cystm1Q8K353 104 aa8.7□□□□□ -1.02
Nup35-201ENSMUST00000028382 Igkv3-3A0A140T8Q0 119 aa8.69□□□□□ -1.02
Nup35-201ENSMUST00000028382 Fam229bQ8CF36 80 aa8.65□□□□□ -1.02
Nup35-201ENSMUST00000028382 Gm5767A0A0J9YTU8 78 aa8.6□□□□□ -1.03
Nup35-201ENSMUST00000028382 Gm26620Q9CY65 116 aa8.6□□□□□ -1.03
Nup35-201ENSMUST00000028382 Herc1E9PZP8 4859 aa8.58□□□□□ -1.04
Nup35-201ENSMUST00000028382 Gm18596A0A1W2P860 280 aa8.58□□□□□ -1.04
Nup35-201ENSMUST00000028382 Gm10267M0QWD8 85 aa8.58□□□□□ -1.04
Nup35-201ENSMUST00000028382 Lce1lQ9D1G7 135 aa8.58□□□□□ -1.04
Nup35-201ENSMUST00000028382 Spink8Q09TK9 105 aa8.56□□□□□ -1.04
Nup35-201ENSMUST00000028382 Defb13Q8R2I4 64 aa8.56□□□□□ -1.04
Nup35-201ENSMUST00000028382 A0A286YE49 62 aa8.54□□□□□ -1.04
Nup35-201ENSMUST00000028382 GhrhP16043 103 aa8.54□□□□□ -1.04
Nup35-201ENSMUST00000028382 BikO70337 150 aa8.52□□□□□ -1.04
Nup35-201ENSMUST00000028382 Atp5eP56382 52 aa8.52□□□□□ -1.04
Nup35-201ENSMUST00000028382 Samd13D3YUG0 102 aa8.52□□□□□ -1.05
Nup35-201ENSMUST00000028382 A930033H14RikG5E8X6 103 aa8.52□□□□□ -1.05
Nup35-201ENSMUST00000028382 Ndufc1Q9CQY9 76 aa8.46□□□□□ -1.06
Nup35-201ENSMUST00000028382 Naa38Q9D2U5 125 aa8.45□□□□□ -1.06
Nup35-201ENSMUST00000028382 Krtap15-1Q9QZU5 150 aa8.45□□□□□ -1.06
Nup35-201ENSMUST00000028382 A030003K21RikA0A1Y7VIM3 128 aa8.43□□□□□ -1.06
Nup35-201ENSMUST00000028382 7530416G11RikJ3QJX6 159 aa8.43□□□□□ -1.06
Nup35-201ENSMUST00000028382 Anapc13Q8R034 74 aa8.42□□□□□ -1.06
Nup35-201ENSMUST00000028382 1700074P13RikQ9D9G7 251 aa8.4□□□□□ -1.06
Nup35-201ENSMUST00000028382 Gm9821Q8K076 103 aa8.39□□□□□ -1.07
Nup35-201ENSMUST00000028382 4930518I15RikQ3V2W7 57 aa8.39□□□□□ -1.07
Nup35-201ENSMUST00000028382 Scgb1b2O35176 93 aa8.38□□□□□ -1.07
Nup35-201ENSMUST00000028382 Rpl37Q9D823 97 aa8.36□□□□□ -1.07
Nup35-201ENSMUST00000028382 Serp2Q6TAW2 65 aa8.31□□□□□ -1.08
Nup35-201ENSMUST00000028382 2210017I01RikA0A0A6YVV1 95 aa8.3□□□□□ -1.08
Nup35-201ENSMUST00000028382 Prm1P02319 51 aa8.29□□□□□ -1.08
Nup35-201ENSMUST00000028382 Gm9789Q8BIG3 52 aa8.29□□□□□ -1.08
Nup35-201ENSMUST00000028382 Ush2AQ2QI47 5193 aa8.28□□□□□ -1.08
Nup35-201ENSMUST00000028382 Gm7735D3YX18 52 aa8.25□□□□□ -1.09
Nup35-201ENSMUST00000028382 2310057N15RikQ9D6T8 200 aa8.23□□□□□ -1.09
Nup35-201ENSMUST00000028382 Gm4491E0CX42 125 aa8.22□□□□□ -1.09
Nup35-201ENSMUST00000028382 2310034C09RikQ9D746 214 aa8.22□□□□□ -1.09
Nup35-201ENSMUST00000028382 Defb38Q7TNV7 63 aa8.19□□□□□ -1.1
Nup35-201ENSMUST00000028382 B230307C23RikQ8BLB2 64 aa8.19□□□□□ -1.1
Nup35-201ENSMUST00000028382 Gm28539A0A087WSL9 92 aa8.17□□□□□ -1.1
Nup35-201ENSMUST00000028382 Atox1O08997 68 aaKnown RBP8.17□□□□□ -1.1
Nup35-201ENSMUST00000028382 Chtf8P0CG14 533 aa8.17□□□□□ -1.1
Nup35-201ENSMUST00000028382 Rnase13Q5GAM7 153 aa8.17□□□□□ -1.1
Nup35-201ENSMUST00000028382 Sec61bQ9CQS8 96 aaKnown RBP8.16□□□□□ -1.1
Nup35-201ENSMUST00000028382 Spint4Q9D263 159 aa8.15□□□□□ -1.1
Nup35-201ENSMUST00000028382 Hmcn2A2AJ76 5100 aa8.15□□□□□ -1.11
Nup35-201ENSMUST00000028382 Apoc4Q61268 124 aa8.14□□□□□ -1.11
Nup35-201ENSMUST00000028382 Coa6Q8BGD8 79 aa8.14□□□□□ -1.11
Nup35-201ENSMUST00000028382 Gm10999F6Q4M4 69 aa8.13□□□□□ -1.11
Nup35-201ENSMUST00000028382 Q8BGJ3 129 aa8.12□□□□□ -1.11
Nup35-201ENSMUST00000028382 Gm21798J3QNU5 87 aa8.1□□□□□ -1.11
Nup35-201ENSMUST00000028382 Gm6217A0A1Y7VJK9 128 aa8.06□□□□□ -1.12
Nup35-201ENSMUST00000028382 Prr13Q9CQJ5 137 aa8.06□□□□□ -1.12
Nup35-201ENSMUST00000028382 Gm10160F6Y577 67 aa8.05□□□□□ -1.12
Nup35-201ENSMUST00000028382 Krtap1-3A2A588 173 aa8.03□□□□□ -1.12
Nup35-201ENSMUST00000028382 Crct1Q6PAI5 102 aa8.03□□□□□ -1.12
Nup35-201ENSMUST00000028382 2310079G19RikQ9D6L6 185 aa8.02□□□□□ -1.13
Nup35-201ENSMUST00000028382 Ubr4A2AN08 5180 aa8.01□□□□□ -1.13
Nup35-201ENSMUST00000028382 Gm17416Q30KP4 66 aa8.01□□□□□ -1.13
Nup35-201ENSMUST00000028382 Krtap16-3Q8C1I6 86 aa7.97□□□□□ -1.13
Nup35-201ENSMUST00000028382 Coa5Q99M07 74 aa7.96□□□□□ -1.14
Nup35-201ENSMUST00000028382 Krtap19-1Q925H2 87 aa7.93□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms