RNA–Protein interactions for RNA: ENSMUST00000028155.11

Tsc1-201, Transcript of Hamartin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tsc1, Length 7,674 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tsc1-201ENSMUST00000028155 Gm5965D3Z724 196 aa4.96□□□□□ -1.62
Tsc1-201ENSMUST00000028155 Lrrc37aB1AWG4 3215 aa4.93□□□□□ -1.62
Tsc1-201ENSMUST00000028155 Ubr5Q80TP3 2792 aa4.91□□□□□ -1.62
Tsc1-201ENSMUST00000028155 Dchs1E9PVD3 3291 aa4.9□□□□□ -1.62
Tsc1-201ENSMUST00000028155 Cmya5Q70KF4 3739 aa4.9□□□□□ -1.62
Tsc1-201ENSMUST00000028155 Fbn2Q61555 2907 aa4.9□□□□□ -1.62
Tsc1-201ENSMUST00000028155 Itpr2Q9Z329 2701 aa4.9□□□□□ -1.63
Tsc1-201ENSMUST00000028155 ApcQ61315 2845 aa4.9□□□□□ -1.63
Tsc1-201ENSMUST00000028155 SpenQ62504 3644 aaKnown RBP4.89□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Zfhx4Q9JJN2 3550 aa4.89□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Vps13cQ8BX70 3748 aa4.88□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Celsr1O35161 3034 aa4.88□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Tnrc18Q80WC3 2878 aa4.87□□□□□ -1.63
Tsc1-201ENSMUST00000028155 FrylF8VQ05 3007 aa4.87□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Gm40193A0A1B0GT39 78 aa4.87□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Stab2Q8R4U0 2559 aa4.86□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Itpr1P11881 2749 aa4.84□□□□□ -1.63
Tsc1-201ENSMUST00000028155 Pkd1l1Q8R526 2615 aa4.8□□□□□ -1.64
Tsc1-201ENSMUST00000028155 A930033H14RikG5E8X6 103 aa4.79□□□□□ -1.64
Tsc1-201ENSMUST00000028155 Myo15bI7HPW8 3033 aa4.78□□□□□ -1.64
Tsc1-201ENSMUST00000028155 Utp20Q5XG71 2788 aaKnown RBP4.78□□□□□ -1.64
Tsc1-201ENSMUST00000028155 Srrm2Q8BTI8 2703 aaKnown RBP4.78□□□□□ -1.64
Tsc1-201ENSMUST00000028155 Col6a5A6H584 2640 aa4.77□□□□□ -1.65
Tsc1-201ENSMUST00000028155 Gm20537G3UYK7 97 aa4.77□□□□□ -1.65
Tsc1-201ENSMUST00000028155 B930094E09RikQ8C4T2 136 aa4.75□□□□□ -1.65
Tsc1-201ENSMUST00000028155 Smg1Q8BKX6 3658 aaKnown RBP4.75□□□□□ -1.65
Tsc1-201ENSMUST00000028155 Tex15F8VPN2 2785 aa4.74□□□□□ -1.65
Tsc1-201ENSMUST00000028155 Gm884A2A9H6 3643 aa4.73□□□□□ -1.65
Tsc1-201ENSMUST00000028155 Igfn1Q3KNY0 2849 aa4.73□□□□□ -1.65
Tsc1-201ENSMUST00000028155 Adgrg4B7ZCC9 3073 aa4.71□□□□□ -1.65
Tsc1-201ENSMUST00000028155 Muc2Q80Z19 2680 aa4.71□□□□□ -1.66
Tsc1-201ENSMUST00000028155 TgO08710 2766 aa4.69□□□□□ -1.66
Tsc1-201ENSMUST00000028155 Gm9918Q8BUR5 174 aa4.69□□□□□ -1.66
Tsc1-201ENSMUST00000028155 FcgbpE9Q0B5 2583 aa4.69□□□□□ -1.66
Tsc1-201ENSMUST00000028155 Trank1Q8BV79 2999 aa4.61□□□□□ -1.67
Tsc1-201ENSMUST00000028155 Hivep1Q03172 2688 aa4.61□□□□□ -1.67
Tsc1-201ENSMUST00000028155 Zzef1Q5SSH7 2924 aa4.61□□□□□ -1.67
Tsc1-201ENSMUST00000028155 LrbaQ9ESE1 2856 aa4.6□□□□□ -1.67
Tsc1-201ENSMUST00000028155 NbeaQ9EPN1 2936 aa4.59□□□□□ -1.67
Tsc1-201ENSMUST00000028155 Gm9736A0A1W2P7N1 277 aa4.59□□□□□ -1.67
Tsc1-201ENSMUST00000028155 Chd9Q8BYH8 2885 aa4.57□□□□□ -1.68
Tsc1-201ENSMUST00000028155 Tenm4Q3UHK6 2771 aa4.53□□□□□ -1.68
Tsc1-201ENSMUST00000028155 2310079G19RikQ9D6L6 185 aa4.53□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Pdzd2E9Q1M1 2796 aa4.52□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Lama5Q61001 3718 aa4.52□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Gm10318A0A1W2P728 225 aa4.51□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Csmd2V9GX34 3611 aa4.5□□□□□ -1.69
Tsc1-201ENSMUST00000028155 FlncQ8VHX6 2726 aaKnown RBP4.5□□□□□ -1.69
Tsc1-201ENSMUST00000028155 4933428G20RikQ9D3X4 101 aa4.5□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Gm17416Q30KP4 66 aa4.49□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Tenm1Q9WTS4 2731 aa4.47□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Celsr2Q9R0M0 2920 aa4.47□□□□□ -1.69
Tsc1-201ENSMUST00000028155 Nf1Q04690 2841 aa4.44□□□□□ -1.7
Tsc1-201ENSMUST00000028155 2210017I01RikA0A0A6YVV1 95 aa4.43□□□□□ -1.7
Tsc1-201ENSMUST00000028155 Gm17402F6Z0L5 76 aa4.43□□□□□ -1.7
Tsc1-201ENSMUST00000028155 Gm19668J3QMD1 248 aa4.42□□□□□ -1.7
Tsc1-201ENSMUST00000028155 LystP97412 3788 aa4.39□□□□□ -1.71
Tsc1-201ENSMUST00000028155 Muc5acE9QAQ8 3455 aa4.38□□□□□ -1.71
Tsc1-201ENSMUST00000028155 Crct1Q6PAI5 102 aa4.34□□□□□ -1.71
Tsc1-201ENSMUST00000028155 Tenm2Q9WTS5 2764 aa4.32□□□□□ -1.72
Tsc1-201ENSMUST00000028155 Tenm3Q9WTS6 2715 aa4.3□□□□□ -1.72
Tsc1-201ENSMUST00000028155 Svep1A2AVA0 3567 aa4.29□□□□□ -1.72
Tsc1-201ENSMUST00000028155 CubnQ9JLB4 3623 aa4.25□□□□□ -1.73
Tsc1-201ENSMUST00000028155 Hspg2Q05793 3707 aaKnown RBP4.25□□□□□ -1.73
Tsc1-201ENSMUST00000028155 Krtap13-1Q8K198 168 aa4.24□□□□□ -1.73
Tsc1-201ENSMUST00000028155 Csmd3Q80T79 3707 aa4.24□□□□□ -1.73
Tsc1-201ENSMUST00000028155 OtogO55225 2910 aa4.24□□□□□ -1.73
Tsc1-201ENSMUST00000028155 Muc4Q8JZM8 3443 aa4.22□□□□□ -1.73
Tsc1-201ENSMUST00000028155 Megf8P60882 2789 aa4.21□□□□□ -1.73
Tsc1-201ENSMUST00000028155 Ank2Q8C8R3 3898 aa4.21□□□□□ -1.74
Tsc1-201ENSMUST00000028155 Gm6358A0A087WPH4 74 aa4.19□□□□□ -1.74
Tsc1-201ENSMUST00000028155 Krtap19-5O08632 62 aa4.19□□□□□ -1.74
Tsc1-201ENSMUST00000028155 VwfQ8CIZ8 2813 aa4.18□□□□□ -1.74
Tsc1-201ENSMUST00000028155 Xirp2Q4U4S6 3784 aa4.18□□□□□ -1.74
Tsc1-201ENSMUST00000028155 Helz2E9QAM5 2947 aaKnown RBP4.17□□□□□ -1.74
Tsc1-201ENSMUST00000028155 Gm11939A2A592 99 aa4.15□□□□□ -1.74
Tsc1-201ENSMUST00000028155 Krtap3-1A2A591 98 aa4.07□□□□□ -1.76
Tsc1-201ENSMUST00000028155 Fbn1Q61554 2873 aaKnown RBP4.07□□□□□ -1.76
Tsc1-201ENSMUST00000028155 BsnO88737 3942 aa4.03□□□□□ -1.76
Tsc1-201ENSMUST00000028155 Sprr2kO70562 68 aa4□□□□□ -1.77
Tsc1-201ENSMUST00000028155 Krtap8-1O08633 61 aa3.97□□□□□ -1.77
Tsc1-201ENSMUST00000028155 Huwe1Q7TMY8 4377 aaKnown RBP3.97□□□□□ -1.77
Tsc1-201ENSMUST00000028155 Col7a1Q63870 2944 aa3.94□□□□□ -1.78
Tsc1-201ENSMUST00000028155 Krtap7-1Q9D3I6 87 aa3.93□□□□□ -1.78
Tsc1-201ENSMUST00000028155 Krtap3-2Q9D638 99 aa3.93□□□□□ -1.78
Tsc1-201ENSMUST00000028155 Krtap3-3Q9D7P0 99 aa3.93□□□□□ -1.78
Tsc1-201ENSMUST00000028155 Krtap19-9aF8WH65 55 aa3.89□□□□□ -1.79
Tsc1-201ENSMUST00000028155 Dnah14A0A140LIJ4 4489 aa3.86□□□□□ -1.79
Tsc1-201ENSMUST00000028155 Gm18596A0A1W2P860 280 aa3.84□□□□□ -1.79
Tsc1-201ENSMUST00000028155 Vps13bQ80TY5 3993 aa3.84□□□□□ -1.8
Tsc1-201ENSMUST00000028155 Krtap1-5A2A590 122 aa3.81□□□□□ -1.8
Tsc1-201ENSMUST00000028155 Muc6Q80T03 2850 aa3.8□□□□□ -1.8
Tsc1-201ENSMUST00000028155 LorP18165 486 aa3.79□□□□□ -1.8
Tsc1-201ENSMUST00000028155 Sprr2a3Q4KL71 83 aa3.79□□□□□ -1.8
Tsc1-201ENSMUST00000028155 Sprr2a1Q9CQK8 83 aa3.79□□□□□ -1.8
Tsc1-201ENSMUST00000028155 Sprr2gO70558 76 aa3.79□□□□□ -1.8
Tsc1-201ENSMUST00000028155 Krtap19-9bQ99NG9 58 aa3.76□□□□□ -1.81
Tsc1-201ENSMUST00000028155 Gm19402J3QJV4 266 aa3.74□□□□□ -1.81
Tsc1-201ENSMUST00000028155 Krtap1-4Q3V2D6 188 aa3.74□□□□□ -1.81
Tsc1-201ENSMUST00000028155 Dnah10D3YYQ8 4591 aa3.73□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms