RNA–Protein interactions for RNA: ENSMUST00000024627.13

Chd1-202, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd1, Length 7,916 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-202ENSMUST00000024627 Krtap13O88375 197 aa8.26□□□□□ -1.09
Chd1-202ENSMUST00000024627 Gm10139O88245 57 aa8.25□□□□□ -1.09
Chd1-202ENSMUST00000024627 Tenm1Q9WTS4 2731 aa8.24□□□□□ -1.09
Chd1-202ENSMUST00000024627 Muc5acE9QAQ8 3455 aa8.23□□□□□ -1.09
Chd1-202ENSMUST00000024627 Krtap10-4Q08EG8 221 aa8.23□□□□□ -1.09
Chd1-202ENSMUST00000024627 BC029722A0A0N4SW31 51 aa8.22□□□□□ -1.09
Chd1-202ENSMUST00000024627 Romo1P60603 79 aa8.21□□□□□ -1.1
Chd1-202ENSMUST00000024627 Csmd2V9GX34 3611 aa8.2□□□□□ -1.1
Chd1-202ENSMUST00000024627 Rpl37Q9D823 97 aa8.2□□□□□ -1.1
Chd1-202ENSMUST00000024627 FcgbpE9Q0B5 2583 aa8.2□□□□□ -1.1
Chd1-202ENSMUST00000024627 Hivep1Q03172 2688 aa8.19□□□□□ -1.1
Chd1-202ENSMUST00000024627 Gm10382Q3V0T5 144 aa8.18□□□□□ -1.1
Chd1-202ENSMUST00000024627 Cystm1Q8K353 104 aa8.17□□□□□ -1.1
Chd1-202ENSMUST00000024627 Sprr1aQ62266 144 aa8.14□□□□□ -1.11
Chd1-202ENSMUST00000024627 Krtap29-1A2A5X4 342 aa8.14□□□□□ -1.11
Chd1-202ENSMUST00000024627 OtogO55225 2910 aa8.13□□□□□ -1.11
Chd1-202ENSMUST00000024627 2310050C09RikG5E8Z3 280 aa8.12□□□□□ -1.11
Chd1-202ENSMUST00000024627 Gm16253D3Z167 63 aa8.12□□□□□ -1.11
Chd1-202ENSMUST00000024627 Pdzd2E9Q1M1 2796 aa8.11□□□□□ -1.11
Chd1-202ENSMUST00000024627 Krtap10-10A0A1W2P7T6 217 aa8.1□□□□□ -1.11
Chd1-202ENSMUST00000024627 Lama5Q61001 3718 aa8.1□□□□□ -1.11
Chd1-202ENSMUST00000024627 Gm3646F6S692 53 aa8.06□□□□□ -1.12
Chd1-202ENSMUST00000024627 A730071L15RikQ8C4X0 137 aa8.03□□□□□ -1.12
Chd1-202ENSMUST00000024627 Gm884A2A9H6 3643 aa7.97□□□□□ -1.13
Chd1-202ENSMUST00000024627 Tnp2P11378 117 aa7.95□□□□□ -1.14
Chd1-202ENSMUST00000024627 TgO08710 2766 aa7.95□□□□□ -1.14
Chd1-202ENSMUST00000024627 Gm2696A0A1W2P709 240 aa7.88□□□□□ -1.15
Chd1-202ENSMUST00000024627 Tenm4Q3UHK6 2771 aa7.88□□□□□ -1.15
Chd1-202ENSMUST00000024627 VwfQ8CIZ8 2813 aa7.87□□□□□ -1.15
Chd1-202ENSMUST00000024627 Krtap14O08640 167 aa7.87□□□□□ -1.15
Chd1-202ENSMUST00000024627 2310057N15RikQ9D6T8 200 aa7.87□□□□□ -1.15
Chd1-202ENSMUST00000024627 Gm11565A2A4M7 156 aa7.86□□□□□ -1.15
Chd1-202ENSMUST00000024627 Tenm3Q9WTS6 2715 aa7.84□□□□□ -1.15
Chd1-202ENSMUST00000024627 Gm21887J3QQ04 176 aa7.76□□□□□ -1.17
Chd1-202ENSMUST00000024627 Helz2E9QAM5 2947 aaKnown RBP7.72□□□□□ -1.17
Chd1-202ENSMUST00000024627 Col7a1Q63870 2944 aa7.72□□□□□ -1.17
Chd1-202ENSMUST00000024627 Gm2310J3QNJ2 377 aa7.71□□□□□ -1.18
Chd1-202ENSMUST00000024627 Svep1A2AVA0 3567 aa7.69□□□□□ -1.18
Chd1-202ENSMUST00000024627 Gm5965D3Z724 196 aa7.68□□□□□ -1.18
Chd1-202ENSMUST00000024627 Muc4Q8JZM8 3443 aa7.67□□□□□ -1.18
Chd1-202ENSMUST00000024627 Ndufaf8A2AMZ4 74 aa7.65□□□□□ -1.18
Chd1-202ENSMUST00000024627 1700042G07RikB1AUF7 90 aa7.65□□□□□ -1.18
Chd1-202ENSMUST00000024627 Cox6b2Q80ZN9 88 aa7.65□□□□□ -1.19
Chd1-202ENSMUST00000024627 2310061N02RikQ9D6S9 174 aa7.64□□□□□ -1.19
Chd1-202ENSMUST00000024627 CubnQ9JLB4 3623 aa7.64□□□□□ -1.19
Chd1-202ENSMUST00000024627 4933415A04RikQ9D443 101 aa7.62□□□□□ -1.19
Chd1-202ENSMUST00000024627 Tnp1P10856 55 aa7.62□□□□□ -1.19
Chd1-202ENSMUST00000024627 Megf8P60882 2789 aa7.61□□□□□ -1.19
Chd1-202ENSMUST00000024627 Ank2Q8C8R3 3898 aa7.61□□□□□ -1.19
Chd1-202ENSMUST00000024627 Rps29P62274 56 aa7.56□□□□□ -1.2
Chd1-202ENSMUST00000024627 LystP97412 3788 aa7.51□□□□□ -1.21
Chd1-202ENSMUST00000024627 Fbn1Q61554 2873 aaKnown RBP7.51□□□□□ -1.21
Chd1-202ENSMUST00000024627 D6Ertd527eA0A0N4SWI3 464 aa7.51□□□□□ -1.21
Chd1-202ENSMUST00000024627 Gm9112A2AI92 75 aa7.45□□□□□ -1.22
Chd1-202ENSMUST00000024627 Tenm2Q9WTS5 2764 aa7.44□□□□□ -1.22
Chd1-202ENSMUST00000024627 Gm9918Q8BUR5 174 aa7.42□□□□□ -1.22
Chd1-202ENSMUST00000024627 Csmd3Q80T79 3707 aa7.41□□□□□ -1.22
Chd1-202ENSMUST00000024627 A930033H14RikG5E8X6 103 aa7.36□□□□□ -1.23
Chd1-202ENSMUST00000024627 Hspg2Q05793 3707 aaKnown RBP7.28□□□□□ -1.24
Chd1-202ENSMUST00000024627 Gm20537G3UYK7 97 aa7.19□□□□□ -1.26
Chd1-202ENSMUST00000024627 Prm2P07978 107 aa7.16□□□□□ -1.26
Chd1-202ENSMUST00000024627 Gm40193A0A1B0GT39 78 aa7.15□□□□□ -1.27
Chd1-202ENSMUST00000024627 B930094E09RikQ8C4T2 136 aa7.15□□□□□ -1.27
Chd1-202ENSMUST00000024627 Gm9736A0A1W2P7N1 277 aa7.14□□□□□ -1.27
Chd1-202ENSMUST00000024627 BsnO88737 3942 aa7.11□□□□□ -1.27
Chd1-202ENSMUST00000024627 Xirp2Q4U4S6 3784 aa7.1□□□□□ -1.27
Chd1-202ENSMUST00000024627 Gm10318A0A1W2P728 225 aa7.1□□□□□ -1.27
Chd1-202ENSMUST00000024627 SmcpP15265 143 aa7.05□□□□□ -1.28
Chd1-202ENSMUST00000024627 Muc6Q80T03 2850 aa6.98□□□□□ -1.29
Chd1-202ENSMUST00000024627 4933428G20RikQ9D3X4 101 aa6.95□□□□□ -1.3
Chd1-202ENSMUST00000024627 Crct1Q6PAI5 102 aa6.88□□□□□ -1.31
Chd1-202ENSMUST00000024627 2310079G19RikQ9D6L6 185 aa6.75□□□□□ -1.33
Chd1-202ENSMUST00000024627 Gm19668J3QMD1 248 aa6.68□□□□□ -1.34
Chd1-202ENSMUST00000024627 Gm17416Q30KP4 66 aa6.65□□□□□ -1.34
Chd1-202ENSMUST00000024627 2210017I01RikA0A0A6YVV1 95 aa6.62□□□□□ -1.35
Chd1-202ENSMUST00000024627 Gm6358A0A087WPH4 74 aa6.58□□□□□ -1.36
Chd1-202ENSMUST00000024627 Gm17402F6Z0L5 76 aa6.51□□□□□ -1.37
Chd1-202ENSMUST00000024627 Vps13bQ80TY5 3993 aa6.5□□□□□ -1.37
Chd1-202ENSMUST00000024627 Krtap13-1Q8K198 168 aa6.45□□□□□ -1.38
Chd1-202ENSMUST00000024627 Krtap19-5O08632 62 aa6.42□□□□□ -1.38
Chd1-202ENSMUST00000024627 Kmt2aP55200 3966 aa6.36□□□□□ -1.39
Chd1-202ENSMUST00000024627 Huwe1Q7TMY8 4377 aaKnown RBP6.35□□□□□ -1.39
Chd1-202ENSMUST00000024627 Sprr2kO70562 68 aa6.34□□□□□ -1.39
Chd1-202ENSMUST00000024627 Dnah6E9Q0B6 4144 aa6.3□□□□□ -1.4
Chd1-202ENSMUST00000024627 Dnah7bL7N1Y0 4068 aa6.29□□□□□ -1.4
Chd1-202ENSMUST00000024627 PrkdcP97313 4128 aa6.28□□□□□ -1.4
Chd1-202ENSMUST00000024627 Gm11939A2A592 99 aa6.23□□□□□ -1.41
Chd1-202ENSMUST00000024627 Dnah3Q8BW94 4083 aa6.21□□□□□ -1.42
Chd1-202ENSMUST00000024627 Krtap8-1O08633 61 aa6.1□□□□□ -1.43
Chd1-202ENSMUST00000024627 Gm18596A0A1W2P860 280 aa6.06□□□□□ -1.44
Chd1-202ENSMUST00000024627 Krtap3-1A2A591 98 aa6.06□□□□□ -1.44
Chd1-202ENSMUST00000024627 Krtap7-1Q9D3I6 87 aa6.01□□□□□ -1.45
Chd1-202ENSMUST00000024627 Sprr2gO70558 76 aa5.98□□□□□ -1.45
Chd1-202ENSMUST00000024627 LorP18165 486 aa5.93□□□□□ -1.46
Chd1-202ENSMUST00000024627 Krtap19-9aF8WH65 55 aa5.92□□□□□ -1.46
Chd1-202ENSMUST00000024627 Dnah14A0A140LIJ4 4489 aa5.91□□□□□ -1.46
Chd1-202ENSMUST00000024627 Dnah7cA0A087WR13 4024 aa5.9□□□□□ -1.47
Chd1-202ENSMUST00000024627 Dnah7aE9Q0T8 4024 aa5.89□□□□□ -1.47
Chd1-202ENSMUST00000024627 Gm19402J3QJV4 266 aa5.86□□□□□ -1.47
Chd1-202ENSMUST00000024627 Krtap3-2Q9D638 99 aa5.82□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 71.9 ms