RNA–Protein interactions for RNA: ENSMUST00000022356.11

Usp54-201, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-201ENSMUST00000022356 Muc5acE9QAQ8 3455 aa4.24□□□□□ -1.73
Usp54-201ENSMUST00000022356 SpenQ62504 3644 aaKnown RBP4.21□□□□□ -1.74
Usp54-201ENSMUST00000022356 Kmt2bO08550 2713 aa4.2□□□□□ -1.74
Usp54-201ENSMUST00000022356 Trank1Q8BV79 2999 aa4.2□□□□□ -1.74
Usp54-201ENSMUST00000022356 Gcn1E9PVA8 2671 aaKnown RBP4.2□□□□□ -1.74
Usp54-201ENSMUST00000022356 Zfhx3Q61329 3726 aa4.19□□□□□ -1.74
Usp54-201ENSMUST00000022356 Map1aQ9QYR6 2776 aa4.19□□□□□ -1.74
Usp54-201ENSMUST00000022356 Smg1Q8BKX6 3658 aaKnown RBP4.18□□□□□ -1.74
Usp54-201ENSMUST00000022356 Gm17402F6Z0L5 76 aa4.18□□□□□ -1.74
Usp54-201ENSMUST00000022356 Muc2Q80Z19 2680 aa4.17□□□□□ -1.74
Usp54-201ENSMUST00000022356 Zzef1Q5SSH7 2924 aa4.17□□□□□ -1.74
Usp54-201ENSMUST00000022356 Gm3646F6S692 53 aa4.16□□□□□ -1.74
Usp54-201ENSMUST00000022356 9530053A07RikE9PVG8 2581 aa4.16□□□□□ -1.74
Usp54-201ENSMUST00000022356 DspE9Q557 2883 aaKnown RBP4.15□□□□□ -1.74
Usp54-201ENSMUST00000022356 NipblQ6KCD5 2798 aaKnown RBP4.12□□□□□ -1.75
Usp54-201ENSMUST00000022356 Tenm4Q3UHK6 2771 aa4.12□□□□□ -1.75
Usp54-201ENSMUST00000022356 2210017I01RikA0A0A6YVV1 95 aa4.11□□□□□ -1.75
Usp54-201ENSMUST00000022356 FcgbpE9Q0B5 2583 aa4.1□□□□□ -1.75
Usp54-201ENSMUST00000022356 Itpr2Q9Z329 2701 aa4.1□□□□□ -1.75
Usp54-201ENSMUST00000022356 Utp20Q5XG71 2788 aaKnown RBP4.1□□□□□ -1.75
Usp54-201ENSMUST00000022356 Gm20537G3UYK7 97 aa4.08□□□□□ -1.76
Usp54-201ENSMUST00000022356 Prrc2cQ3TLH4 2846 aaKnown RBP4.08□□□□□ -1.76
Usp54-201ENSMUST00000022356 Ndufaf8A2AMZ4 74 aa4.08□□□□□ -1.76
Usp54-201ENSMUST00000022356 Stab2Q8R4U0 2559 aa4.08□□□□□ -1.76
Usp54-201ENSMUST00000022356 Gm9112A2AI92 75 aa4.08□□□□□ -1.76
Usp54-201ENSMUST00000022356 Csmd1Q923L3 3564 aa4.07□□□□□ -1.76
Usp54-201ENSMUST00000022356 Svep1A2AVA0 3567 aa4.07□□□□□ -1.76
Usp54-201ENSMUST00000022356 Col6a5A6H584 2640 aa4.05□□□□□ -1.76
Usp54-201ENSMUST00000022356 B930094E09RikQ8C4T2 136 aa4.05□□□□□ -1.76
Usp54-201ENSMUST00000022356 Prm2P07978 107 aa4.04□□□□□ -1.76
Usp54-201ENSMUST00000022356 4933415A04RikQ9D443 101 aa4.04□□□□□ -1.76
Usp54-201ENSMUST00000022356 Cmya5Q70KF4 3739 aa4.02□□□□□ -1.77
Usp54-201ENSMUST00000022356 SmcpP15265 143 aa4.01□□□□□ -1.77
Usp54-201ENSMUST00000022356 Celsr2Q9R0M0 2920 aa3.99□□□□□ -1.77
Usp54-201ENSMUST00000022356 FlncQ8VHX6 2726 aaKnown RBP3.98□□□□□ -1.77
Usp54-201ENSMUST00000022356 Igfn1Q3KNY0 2849 aa3.98□□□□□ -1.77
Usp54-201ENSMUST00000022356 Ubr5Q80TP3 2792 aa3.97□□□□□ -1.77
Usp54-201ENSMUST00000022356 4933428G20RikQ9D3X4 101 aa3.97□□□□□ -1.77
Usp54-201ENSMUST00000022356 LrbaQ9ESE1 2856 aa3.96□□□□□ -1.78
Usp54-201ENSMUST00000022356 Krtap19-5O08632 62 aa3.96□□□□□ -1.78
Usp54-201ENSMUST00000022356 Chd6A3KFM7 2711 aa3.95□□□□□ -1.78
Usp54-201ENSMUST00000022356 2310079G19RikQ9D6L6 185 aa3.93□□□□□ -1.78
Usp54-201ENSMUST00000022356 Chd9Q8BYH8 2885 aa3.92□□□□□ -1.78
Usp54-201ENSMUST00000022356 Csmd2V9GX34 3611 aa3.91□□□□□ -1.78
Usp54-201ENSMUST00000022356 Nbeal2Q6ZQA0 2742 aa3.91□□□□□ -1.78
Usp54-201ENSMUST00000022356 Muc4Q8JZM8 3443 aa3.91□□□□□ -1.78
Usp54-201ENSMUST00000022356 Gm19668J3QMD1 248 aa3.9□□□□□ -1.78
Usp54-201ENSMUST00000022356 Pkd1l1Q8R526 2615 aa3.9□□□□□ -1.79
Usp54-201ENSMUST00000022356 Gm9736A0A1W2P7N1 277 aa3.9□□□□□ -1.79
Usp54-201ENSMUST00000022356 Hivep1Q03172 2688 aa3.88□□□□□ -1.79
Usp54-201ENSMUST00000022356 Nf1Q04690 2841 aa3.87□□□□□ -1.79
Usp54-201ENSMUST00000022356 HrnrQ8VHD8 2496 aa3.87□□□□□ -1.79
Usp54-201ENSMUST00000022356 OtogO55225 2910 aa3.85□□□□□ -1.79
Usp54-201ENSMUST00000022356 Helz2E9QAM5 2947 aaKnown RBP3.84□□□□□ -1.8
Usp54-201ENSMUST00000022356 Tenm3Q9WTS6 2715 aa3.81□□□□□ -1.8
Usp54-201ENSMUST00000022356 Tex15F8VPN2 2785 aa3.8□□□□□ -1.8
Usp54-201ENSMUST00000022356 Col7a1Q63870 2944 aa3.8□□□□□ -1.8
Usp54-201ENSMUST00000022356 Gm18596A0A1W2P860 280 aa3.78□□□□□ -1.8
Usp54-201ENSMUST00000022356 Pdzd2E9Q1M1 2796 aa3.77□□□□□ -1.81
Usp54-201ENSMUST00000022356 Krtap13-1Q8K198 168 aa3.76□□□□□ -1.81
Usp54-201ENSMUST00000022356 LystP97412 3788 aa3.76□□□□□ -1.81
Usp54-201ENSMUST00000022356 Gm9918Q8BUR5 174 aa3.75□□□□□ -1.81
Usp54-201ENSMUST00000022356 CubnQ9JLB4 3623 aa3.75□□□□□ -1.81
Usp54-201ENSMUST00000022356 Sprr2kO70562 68 aa3.74□□□□□ -1.81
Usp54-201ENSMUST00000022356 Ank2Q8C8R3 3898 aa3.74□□□□□ -1.81
Usp54-201ENSMUST00000022356 Gm11939A2A592 99 aa3.73□□□□□ -1.81
Usp54-201ENSMUST00000022356 BsnO88737 3942 aa3.73□□□□□ -1.81
Usp54-201ENSMUST00000022356 Krtap8-1O08633 61 aa3.73□□□□□ -1.81
Usp54-201ENSMUST00000022356 Huwe1Q7TMY8 4377 aaKnown RBP3.73□□□□□ -1.81
Usp54-201ENSMUST00000022356 TgO08710 2766 aa3.72□□□□□ -1.81
Usp54-201ENSMUST00000022356 Fbn1Q61554 2873 aaKnown RBP3.72□□□□□ -1.81
Usp54-201ENSMUST00000022356 Srrm2Q8BTI8 2703 aaKnown RBP3.7□□□□□ -1.82
Usp54-201ENSMUST00000022356 Megf8P60882 2789 aa3.68□□□□□ -1.82
Usp54-201ENSMUST00000022356 Sprr2gO70558 76 aa3.67□□□□□ -1.82
Usp54-201ENSMUST00000022356 Xirp2Q4U4S6 3784 aa3.65□□□□□ -1.82
Usp54-201ENSMUST00000022356 ApcQ61315 2845 aa3.61□□□□□ -1.83
Usp54-201ENSMUST00000022356 Tenm2Q9WTS5 2764 aa3.61□□□□□ -1.83
Usp54-201ENSMUST00000022356 Crct1Q6PAI5 102 aa3.6□□□□□ -1.83
Usp54-201ENSMUST00000022356 Krtap19-9aF8WH65 55 aa3.6□□□□□ -1.83
Usp54-201ENSMUST00000022356 Krtap1-5A2A590 122 aa3.58□□□□□ -1.84
Usp54-201ENSMUST00000022356 VwfQ8CIZ8 2813 aa3.57□□□□□ -1.84
Usp54-201ENSMUST00000022356 Krtap3-1A2A591 98 aa3.57□□□□□ -1.84
Usp54-201ENSMUST00000022356 Tenm1Q9WTS4 2731 aa3.56□□□□□ -1.84
Usp54-201ENSMUST00000022356 Lce1mQ9CR91 182 aa3.55□□□□□ -1.84
Usp54-201ENSMUST00000022356 Gm10318A0A1W2P728 225 aa3.52□□□□□ -1.85
Usp54-201ENSMUST00000022356 Prm1P02319 51 aa3.51□□□□□ -1.85
Usp54-201ENSMUST00000022356 Gm19402J3QJV4 266 aa3.51□□□□□ -1.85
Usp54-201ENSMUST00000022356 Hspg2Q05793 3707 aaKnown RBP3.51□□□□□ -1.85
Usp54-201ENSMUST00000022356 Muc6Q80T03 2850 aa3.47□□□□□ -1.85
Usp54-201ENSMUST00000022356 Gm6358A0A087WPH4 74 aa3.47□□□□□ -1.85
Usp54-201ENSMUST00000022356 Krtap1-4Q3V2D6 188 aa3.44□□□□□ -1.86
Usp54-201ENSMUST00000022356 Krtap19-9bQ99NG9 58 aa3.43□□□□□ -1.86
Usp54-201ENSMUST00000022356 Krtap3-2Q9D638 99 aa3.43□□□□□ -1.86
Usp54-201ENSMUST00000022356 Krtap3-3Q9D7P0 99 aa3.43□□□□□ -1.86
Usp54-201ENSMUST00000022356 LorP18165 486 aa3.42□□□□□ -1.86
Usp54-201ENSMUST00000022356 Dnah14A0A140LIJ4 4489 aa3.41□□□□□ -1.86
Usp54-201ENSMUST00000022356 Sprr2a3Q4KL71 83 aa3.39□□□□□ -1.87
Usp54-201ENSMUST00000022356 Sprr2a1Q9CQK8 83 aa3.39□□□□□ -1.87
Usp54-201ENSMUST00000022356 Krtap12-1Q9Z287 130 aa3.37□□□□□ -1.87
Usp54-201ENSMUST00000022356 Krtap7-1Q9D3I6 87 aa3.36□□□□□ -1.87
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms