RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Dmxl2Q8BPN8 3032 aa6.7□□□□□ -1.34
Ldb3-201ENSMUST00000022327 Unc80Q8BLN6 3261 aa6.68□□□□□ -1.34
Ldb3-201ENSMUST00000022327 FryE9Q8I9 3020 aa6.67□□□□□ -1.34
Ldb3-201ENSMUST00000022327 Tenm4Q3UHK6 2771 aa6.66□□□□□ -1.34
Ldb3-201ENSMUST00000022327 DspE9Q557 2883 aaKnown RBP6.65□□□□□ -1.34
Ldb3-201ENSMUST00000022327 Gm2696A0A1W2P709 240 aa6.64□□□□□ -1.35
Ldb3-201ENSMUST00000022327 Celsr2Q9R0M0 2920 aa6.61□□□□□ -1.35
Ldb3-201ENSMUST00000022327 Celsr3Q91ZI0 3301 aa6.59□□□□□ -1.35
Ldb3-201ENSMUST00000022327 Tenm3Q9WTS6 2715 aa6.59□□□□□ -1.35
Ldb3-201ENSMUST00000022327 Pdzd2E9Q1M1 2796 aa6.59□□□□□ -1.36
Ldb3-201ENSMUST00000022327 Gm21887J3QQ04 176 aa6.57□□□□□ -1.36
Ldb3-201ENSMUST00000022327 Lama1P19137 3084 aa6.56□□□□□ -1.36
Ldb3-201ENSMUST00000022327 A930033H14RikG5E8X6 103 aa6.55□□□□□ -1.36
Ldb3-201ENSMUST00000022327 Gm5965D3Z724 196 aa6.55□□□□□ -1.36
Ldb3-201ENSMUST00000022327 Gm40193A0A1B0GT39 78 aa6.55□□□□□ -1.36
Ldb3-201ENSMUST00000022327 Chd9Q8BYH8 2885 aa6.53□□□□□ -1.36
Ldb3-201ENSMUST00000022327 Trank1Q8BV79 2999 aa6.5□□□□□ -1.37
Ldb3-201ENSMUST00000022327 Gm20537G3UYK7 97 aa6.48□□□□□ -1.37
Ldb3-201ENSMUST00000022327 Ndufaf8A2AMZ4 74 aa6.47□□□□□ -1.37
Ldb3-201ENSMUST00000022327 Nf1Q04690 2841 aa6.46□□□□□ -1.38
Ldb3-201ENSMUST00000022327 2310079G19RikQ9D6L6 185 aa6.45□□□□□ -1.38
Ldb3-201ENSMUST00000022327 Brca2P97929 3329 aa6.42□□□□□ -1.38
Ldb3-201ENSMUST00000022327 Dchs2A0A0A6YW72 3346 aa6.42□□□□□ -1.38
Ldb3-201ENSMUST00000022327 Tnp1P10856 55 aa6.42□□□□□ -1.38
Ldb3-201ENSMUST00000022327 Gm17416Q30KP4 66 aa6.39□□□□□ -1.39
Ldb3-201ENSMUST00000022327 B930094E09RikQ8C4T2 136 aa6.36□□□□□ -1.39
Ldb3-201ENSMUST00000022327 2310057N15RikQ9D6T8 200 aa6.35□□□□□ -1.39
Ldb3-201ENSMUST00000022327 Tenm1Q9WTS4 2731 aa6.29□□□□□ -1.4
Ldb3-201ENSMUST00000022327 LrbaQ9ESE1 2856 aa6.28□□□□□ -1.4
Ldb3-201ENSMUST00000022327 Helz2E9QAM5 2947 aaKnown RBP6.27□□□□□ -1.41
Ldb3-201ENSMUST00000022327 Col6a3E9PWQ3 3284 aa6.25□□□□□ -1.41
Ldb3-201ENSMUST00000022327 2210017I01RikA0A0A6YVV1 95 aa6.24□□□□□ -1.41
Ldb3-201ENSMUST00000022327 Gm9112A2AI92 75 aa6.23□□□□□ -1.41
Ldb3-201ENSMUST00000022327 Gm17402F6Z0L5 76 aa6.21□□□□□ -1.41
Ldb3-201ENSMUST00000022327 VcanQ62059 3357 aa6.2□□□□□ -1.42
Ldb3-201ENSMUST00000022327 Zfhx3Q61329 3726 aa6.19□□□□□ -1.42
Ldb3-201ENSMUST00000022327 Tenm2Q9WTS5 2764 aa6.18□□□□□ -1.42
Ldb3-201ENSMUST00000022327 Dchs1E9PVD3 3291 aa6.13□□□□□ -1.43
Ldb3-201ENSMUST00000022327 RelnQ60841 3461 aa6.13□□□□□ -1.43
Ldb3-201ENSMUST00000022327 Gm11939A2A592 99 aa6.12□□□□□ -1.43
Ldb3-201ENSMUST00000022327 SpegQ62407 3262 aa6.09□□□□□ -1.44
Ldb3-201ENSMUST00000022327 Gm9736A0A1W2P7N1 277 aa6.07□□□□□ -1.44
Ldb3-201ENSMUST00000022327 Vps13cQ8BX70 3748 aa6.03□□□□□ -1.44
Ldb3-201ENSMUST00000022327 Wdfy3Q6VNB8 3508 aa6.01□□□□□ -1.45
Ldb3-201ENSMUST00000022327 Akap9Q70FJ1 3797 aa6□□□□□ -1.45
Ldb3-201ENSMUST00000022327 Megf8P60882 2789 aa5.99□□□□□ -1.45
Ldb3-201ENSMUST00000022327 OtogO55225 2910 aa5.99□□□□□ -1.45
Ldb3-201ENSMUST00000022327 Muc5acE9QAQ8 3455 aa5.98□□□□□ -1.45
Ldb3-201ENSMUST00000022327 Myo15aQ9QZZ4 3511 aa5.96□□□□□ -1.45
Ldb3-201ENSMUST00000022327 VwfQ8CIZ8 2813 aa5.92□□□□□ -1.46
Ldb3-201ENSMUST00000022327 DmdP11531 3678 aa5.91□□□□□ -1.46
Ldb3-201ENSMUST00000022327 Krtap3-2Q9D638 99 aa5.91□□□□□ -1.46
Ldb3-201ENSMUST00000022327 Krtap3-3Q9D7P0 99 aa5.91□□□□□ -1.46
Ldb3-201ENSMUST00000022327 Gm9918Q8BUR5 174 aa5.91□□□□□ -1.46
Ldb3-201ENSMUST00000022327 Krtap19-5O08632 62 aa5.89□□□□□ -1.47
Ldb3-201ENSMUST00000022327 Fbn1Q61554 2873 aaKnown RBP5.86□□□□□ -1.47
Ldb3-201ENSMUST00000022327 Krtap13-1Q8K198 168 aa5.83□□□□□ -1.48
Ldb3-201ENSMUST00000022327 Gm19668J3QMD1 248 aa5.82□□□□□ -1.48
Ldb3-201ENSMUST00000022327 Prm2P07978 107 aa5.82□□□□□ -1.48
Ldb3-201ENSMUST00000022327 Krtap3-1A2A591 98 aa5.79□□□□□ -1.48
Ldb3-201ENSMUST00000022327 Csmd1Q923L3 3564 aa5.72□□□□□ -1.49
Ldb3-201ENSMUST00000022327 Ank2Q8C8R3 3898 aa5.69□□□□□ -1.5
Ldb3-201ENSMUST00000022327 Smg1Q8BKX6 3658 aaKnown RBP5.67□□□□□ -1.5
Ldb3-201ENSMUST00000022327 Lama5Q61001 3718 aa5.65□□□□□ -1.5
Ldb3-201ENSMUST00000022327 4933428G20RikQ9D3X4 101 aa5.65□□□□□ -1.51
Ldb3-201ENSMUST00000022327 Zfhx4Q9JJN2 3550 aa5.63□□□□□ -1.51
Ldb3-201ENSMUST00000022327 Gm10318A0A1W2P728 225 aa5.6□□□□□ -1.51
Ldb3-201ENSMUST00000022327 Col7a1Q63870 2944 aa5.56□□□□□ -1.52
Ldb3-201ENSMUST00000022327 SpenQ62504 3644 aaKnown RBP5.55□□□□□ -1.52
Ldb3-201ENSMUST00000022327 Crct1Q6PAI5 102 aa5.54□□□□□ -1.52
Ldb3-201ENSMUST00000022327 Muc6Q80T03 2850 aa5.53□□□□□ -1.52
Ldb3-201ENSMUST00000022327 Krtap1-5A2A590 122 aa5.44□□□□□ -1.54
Ldb3-201ENSMUST00000022327 Gm884A2A9H6 3643 aa5.41□□□□□ -1.54
Ldb3-201ENSMUST00000022327 Sprr2a3Q4KL71 83 aa5.4□□□□□ -1.54
Ldb3-201ENSMUST00000022327 Sprr2a1Q9CQK8 83 aa5.4□□□□□ -1.54
Ldb3-201ENSMUST00000022327 Dnah14A0A140LIJ4 4489 aa5.4□□□□□ -1.54
Ldb3-201ENSMUST00000022327 Huwe1Q7TMY8 4377 aaKnown RBP5.34□□□□□ -1.55
Ldb3-201ENSMUST00000022327 Cmya5Q70KF4 3739 aa5.33□□□□□ -1.56
Ldb3-201ENSMUST00000022327 Dnah5Q8VHE6 4621 aa5.3□□□□□ -1.56
Ldb3-201ENSMUST00000022327 Muc4Q8JZM8 3443 aa5.3□□□□□ -1.56
Ldb3-201ENSMUST00000022327 Stard9Q80TF6 4561 aa5.28□□□□□ -1.56
Ldb3-201ENSMUST00000022327 Svep1A2AVA0 3567 aa5.27□□□□□ -1.57
Ldb3-201ENSMUST00000022327 Krtap19-9aF8WH65 55 aa5.27□□□□□ -1.57
Ldb3-201ENSMUST00000022327 Dnah10D3YYQ8 4591 aa5.26□□□□□ -1.57
Ldb3-201ENSMUST00000022327 Vps13dB1ART2 4390 aa5.26□□□□□ -1.57
Ldb3-201ENSMUST00000022327 Krtap7-1Q9D3I6 87 aa5.26□□□□□ -1.57
Ldb3-201ENSMUST00000022327 Krtap1-4Q3V2D6 188 aa5.23□□□□□ -1.57
Ldb3-201ENSMUST00000022327 Dnah17Q69Z23 4481 aa5.21□□□□□ -1.57
Ldb3-201ENSMUST00000022327 PlecQ9QXS1 4691 aaKnown RBP5.19□□□□□ -1.58
Ldb3-201ENSMUST00000022327 Krtap19-9bQ99NG9 58 aa5.13□□□□□ -1.59
Ldb3-201ENSMUST00000022327 Csmd2V9GX34 3611 aa5.13□□□□□ -1.59
Ldb3-201ENSMUST00000022327 Krtap8-1O08633 61 aa5.06□□□□□ -1.6
Ldb3-201ENSMUST00000022327 Gm6358A0A087WPH4 74 aa5.05□□□□□ -1.6
Ldb3-201ENSMUST00000022327 Krtap12-1Q9Z287 130 aa5.05□□□□□ -1.6
Ldb3-201ENSMUST00000022327 LystP97412 3788 aa5.03□□□□□ -1.6
Ldb3-201ENSMUST00000022327 Gm19402J3QJV4 266 aa5.02□□□□□ -1.61
Ldb3-201ENSMUST00000022327 LorP18165 486 aa5.02□□□□□ -1.61
Ldb3-201ENSMUST00000022327 Dync2h1Q45VK7 4306 aa5□□□□□ -1.61
Ldb3-201ENSMUST00000022327 Gm18596A0A1W2P860 280 aa4.97□□□□□ -1.61
Ldb3-201ENSMUST00000022327 Dnah2P0C6F1 4456 aa4.94□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms