RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Gm17606F6ZL36 78 aa7.65□□□□□ -1.18
Msh6-201ENSMUST00000005503 Gm12216A0A1W2P827 62 aa7.64□□□□□ -1.19
Msh6-201ENSMUST00000005503 Gm17349F7BGH6 99 aa7.63□□□□□ -1.19
Msh6-201ENSMUST00000005503 Csmd2V9GX34 3611 aa7.62□□□□□ -1.19
Msh6-201ENSMUST00000005503 Gm26620Q9CY65 116 aa7.62□□□□□ -1.19
Msh6-201ENSMUST00000005503 Gm16253D3Z167 63 aa7.59□□□□□ -1.19
Msh6-201ENSMUST00000005503 1700042G07RikB1AUF7 90 aa7.58□□□□□ -1.2
Msh6-201ENSMUST00000005503 Fbn1Q61554 2873 aaKnown RBP7.57□□□□□ -1.2
Msh6-201ENSMUST00000005503 Gm2310J3QNJ2 377 aa7.57□□□□□ -1.2
Msh6-201ENSMUST00000005503 Gm9507D3Z5T3 223 aa7.56□□□□□ -1.2
Msh6-201ENSMUST00000005503 Krtap13O88375 197 aa7.56□□□□□ -1.2
Msh6-201ENSMUST00000005503 2310061N02RikQ9D6S9 174 aa7.55□□□□□ -1.2
Msh6-201ENSMUST00000005503 CubnQ9JLB4 3623 aa7.55□□□□□ -1.2
Msh6-201ENSMUST00000005503 VwfQ8CIZ8 2813 aa7.54□□□□□ -1.2
Msh6-201ENSMUST00000005503 LystP97412 3788 aa7.53□□□□□ -1.2
Msh6-201ENSMUST00000005503 Gm3880A0A1B0GSB3 72 aa7.52□□□□□ -1.21
Msh6-201ENSMUST00000005503 Gm9821Q8K076 103 aa7.49□□□□□ -1.21
Msh6-201ENSMUST00000005503 Krtap10-4Q08EG8 221 aa7.49□□□□□ -1.21
Msh6-201ENSMUST00000005503 Gm4491E0CX42 125 aa7.44□□□□□ -1.22
Msh6-201ENSMUST00000005503 Krtap29-1A2A5X4 342 aa7.44□□□□□ -1.22
Msh6-201ENSMUST00000005503 Rnase13Q5GAM7 153 aa7.43□□□□□ -1.22
Msh6-201ENSMUST00000005503 2310050C09RikG5E8Z3 280 aa7.41□□□□□ -1.22
Msh6-201ENSMUST00000005503 Krtap14O08640 167 aa7.4□□□□□ -1.23
Msh6-201ENSMUST00000005503 CriptO70333 101 aa7.4□□□□□ -1.23
Msh6-201ENSMUST00000005503 Col7a1Q63870 2944 aa7.36□□□□□ -1.23
Msh6-201ENSMUST00000005503 Mp68P56379 58 aa7.35□□□□□ -1.23
Msh6-201ENSMUST00000005503 Krtap10-10A0A1W2P7T6 217 aa7.32□□□□□ -1.24
Msh6-201ENSMUST00000005503 Gm9955Q8CEJ8 102 aa7.23□□□□□ -1.25
Msh6-201ENSMUST00000005503 Tenm2Q9WTS5 2764 aa7.22□□□□□ -1.25
Msh6-201ENSMUST00000005503 Tnp2P11378 117 aa7.21□□□□□ -1.25
Msh6-201ENSMUST00000005503 OxtP35454 125 aa7.2□□□□□ -1.26
Msh6-201ENSMUST00000005503 Krtap15-1Q9QZU5 150 aa7.16□□□□□ -1.26
Msh6-201ENSMUST00000005503 Gm2696A0A1W2P709 240 aa7.14□□□□□ -1.27
Msh6-201ENSMUST00000005503 Muc6Q80T03 2850 aa7.14□□□□□ -1.27
Msh6-201ENSMUST00000005503 Ank2Q8C8R3 3898 aa7.13□□□□□ -1.27
Msh6-201ENSMUST00000005503 Megf8P60882 2789 aa7.13□□□□□ -1.27
Msh6-201ENSMUST00000005503 D6Ertd527eA0A0N4SWI3 464 aa7.09□□□□□ -1.27
Msh6-201ENSMUST00000005503 Xirp2Q4U4S6 3784 aa7.06□□□□□ -1.28
Msh6-201ENSMUST00000005503 Rpl37Q9D823 97 aa7.05□□□□□ -1.28
Msh6-201ENSMUST00000005503 Cox6b2Q80ZN9 88 aa7.02□□□□□ -1.29
Msh6-201ENSMUST00000005503 Romo1P60603 79 aa7□□□□□ -1.29
Msh6-201ENSMUST00000005503 Gm5767A0A0J9YTU8 78 aa7□□□□□ -1.29
Msh6-201ENSMUST00000005503 Pla2g10Q9QXX3 151 aa7□□□□□ -1.29
Msh6-201ENSMUST00000005503 Gm10382Q3V0T5 144 aa6.99□□□□□ -1.29
Msh6-201ENSMUST00000005503 Gm20538F6Z9R1 75 aa6.95□□□□□ -1.3
Msh6-201ENSMUST00000005503 Hspg2Q05793 3707 aaKnown RBP6.91□□□□□ -1.3
Msh6-201ENSMUST00000005503 2310079G19RikQ9D6L6 185 aa6.89□□□□□ -1.31
Msh6-201ENSMUST00000005503 Spink7Q6IE32 76 aa6.88□□□□□ -1.31
Msh6-201ENSMUST00000005503 Gm20537G3UYK7 97 aa6.88□□□□□ -1.31
Msh6-201ENSMUST00000005503 Csmd3Q80T79 3707 aa6.87□□□□□ -1.31
Msh6-201ENSMUST00000005503 BsnO88737 3942 aa6.83□□□□□ -1.32
Msh6-201ENSMUST00000005503 Rps29P62274 56 aa6.8□□□□□ -1.32
Msh6-201ENSMUST00000005503 A930033H14RikG5E8X6 103 aa6.76□□□□□ -1.33
Msh6-201ENSMUST00000005503 Gm5965D3Z724 196 aa6.75□□□□□ -1.33
Msh6-201ENSMUST00000005503 Gm19426M0QWC7 77 aa6.75□□□□□ -1.33
Msh6-201ENSMUST00000005503 BC029722A0A0N4SW31 51 aa6.74□□□□□ -1.33
Msh6-201ENSMUST00000005503 Dnah14A0A140LIJ4 4489 aa6.7□□□□□ -1.34
Msh6-201ENSMUST00000005503 Gm9918Q8BUR5 174 aa6.67□□□□□ -1.34
Msh6-201ENSMUST00000005503 Ndufaf8A2AMZ4 74 aa6.65□□□□□ -1.35
Msh6-201ENSMUST00000005503 Camk2n1Q6QWF9 78 aa6.61□□□□□ -1.35
Msh6-201ENSMUST00000005503 Fam229aB2KGE5 128 aa6.6□□□□□ -1.35
Msh6-201ENSMUST00000005503 Gm9736A0A1W2P7N1 277 aa6.57□□□□□ -1.36
Msh6-201ENSMUST00000005503 Dnah10D3YYQ8 4591 aa6.56□□□□□ -1.36
Msh6-201ENSMUST00000005503 Sec61bQ9CQS8 96 aaKnown RBP6.54□□□□□ -1.36
Msh6-201ENSMUST00000005503 Krtap3-2Q9D638 99 aa6.53□□□□□ -1.36
Msh6-201ENSMUST00000005503 Krtap3-3Q9D7P0 99 aa6.53□□□□□ -1.36
Msh6-201ENSMUST00000005503 Gm11939A2A592 99 aa6.52□□□□□ -1.37
Msh6-201ENSMUST00000005503 Dnah7bL7N1Y0 4068 aa6.49□□□□□ -1.37
Msh6-201ENSMUST00000005503 Gm21887J3QQ04 176 aa6.48□□□□□ -1.37
Msh6-201ENSMUST00000005503 2310057N15RikQ9D6T8 200 aa6.48□□□□□ -1.37
Msh6-201ENSMUST00000005503 B930094E09RikQ8C4T2 136 aa6.39□□□□□ -1.39
Msh6-201ENSMUST00000005503 Huwe1Q7TMY8 4377 aaKnown RBP6.35□□□□□ -1.39
Msh6-201ENSMUST00000005503 Gm17416Q30KP4 66 aa6.29□□□□□ -1.4
Msh6-201ENSMUST00000005503 Dnah11E9Q7N9 4488 aa6.28□□□□□ -1.4
Msh6-201ENSMUST00000005503 Gm9112A2AI92 75 aa6.28□□□□□ -1.4
Msh6-201ENSMUST00000005503 Dnah17Q69Z23 4481 aa6.28□□□□□ -1.4
Msh6-201ENSMUST00000005503 2210017I01RikA0A0A6YVV1 95 aa6.24□□□□□ -1.41
Msh6-201ENSMUST00000005503 Prm2P07978 107 aa6.23□□□□□ -1.41
Msh6-201ENSMUST00000005503 Dnah5Q8VHE6 4621 aa6.23□□□□□ -1.41
Msh6-201ENSMUST00000005503 PlecQ9QXS1 4691 aaKnown RBP6.22□□□□□ -1.41
Msh6-201ENSMUST00000005503 Krtap19-5O08632 62 aa6.2□□□□□ -1.42
Msh6-201ENSMUST00000005503 Dnah9B1AR51 4484 aa6.19□□□□□ -1.42
Msh6-201ENSMUST00000005503 Gm40193A0A1B0GT39 78 aa6.19□□□□□ -1.42
Msh6-201ENSMUST00000005503 Gm10318A0A1W2P728 225 aa6.17□□□□□ -1.42
Msh6-201ENSMUST00000005503 Krtap3-1A2A591 98 aa6.13□□□□□ -1.43
Msh6-201ENSMUST00000005503 Lrp1bQ9JI18 4599 aa6.08□□□□□ -1.44
Msh6-201ENSMUST00000005503 Dnah3Q8BW94 4083 aa6.08□□□□□ -1.44
Msh6-201ENSMUST00000005503 Kmt2aP55200 3966 aa6.07□□□□□ -1.44
Msh6-201ENSMUST00000005503 Krtap13-1Q8K198 168 aa6.06□□□□□ -1.44
Msh6-201ENSMUST00000005503 Vps13dB1ART2 4390 aa6.06□□□□□ -1.44
Msh6-201ENSMUST00000005503 TnxbO35452 4006 aa6.03□□□□□ -1.44
Msh6-201ENSMUST00000005503 Stard9Q80TF6 4561 aa6.02□□□□□ -1.45
Msh6-201ENSMUST00000005503 Tnp1P10856 55 aa6.02□□□□□ -1.45
Msh6-201ENSMUST00000005503 PrkdcP97313 4128 aa6□□□□□ -1.45
Msh6-201ENSMUST00000005503 Crct1Q6PAI5 102 aa6□□□□□ -1.45
Msh6-201ENSMUST00000005503 ApobE9Q414 4505 aa5.96□□□□□ -1.46
Msh6-201ENSMUST00000005503 Gm17402F6Z0L5 76 aa5.96□□□□□ -1.46
Msh6-201ENSMUST00000005503 Hectd4E9Q2E4 4418 aa5.94□□□□□ -1.46
Msh6-201ENSMUST00000005503 Dnah6E9Q0B6 4144 aa5.93□□□□□ -1.46
Msh6-201ENSMUST00000005503 Dnah2P0C6F1 4456 aa5.92□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 96.1 ms