RNA–Protein interactions for RNA: ENSMUST00000000619.7

Clcn4-201, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clcn4, Length 4,607 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-201ENSMUST00000000619 Cypt14J3QPF7 87 aa6.86□□□□□ -1.31
Clcn4-201ENSMUST00000000619 Cypt15B1AXS0 87 aa6.85□□□□□ -1.31
Clcn4-201ENSMUST00000000619 Mp68P56379 58 aa6.85□□□□□ -1.31
Clcn4-201ENSMUST00000000619 Gm9507D3Z5T3 223 aa6.81□□□□□ -1.32
Clcn4-201ENSMUST00000000619 CubnQ9JLB4 3623 aa6.78□□□□□ -1.32
Clcn4-201ENSMUST00000000619 Defb1P56386 69 aa6.78□□□□□ -1.32
Clcn4-201ENSMUST00000000619 Krtap29-1A2A5X4 342 aa6.76□□□□□ -1.33
Clcn4-201ENSMUST00000000619 Xirp2Q4U4S6 3784 aa6.75□□□□□ -1.33
Clcn4-201ENSMUST00000000619 Gm16253D3Z167 63 aa6.74□□□□□ -1.33
Clcn4-201ENSMUST00000000619 RetnlbQ99P86 105 aa6.74□□□□□ -1.33
Clcn4-201ENSMUST00000000619 Gm2310J3QNJ2 377 aa6.72□□□□□ -1.33
Clcn4-201ENSMUST00000000619 VwfQ8CIZ8 2813 aa6.72□□□□□ -1.33
Clcn4-201ENSMUST00000000619 BsnO88737 3942 aa6.71□□□□□ -1.34
Clcn4-201ENSMUST00000000619 Gm21798J3QNU5 87 aa6.7□□□□□ -1.34
Clcn4-201ENSMUST00000000619 Krtap10-4Q08EG8 221 aa6.67□□□□□ -1.34
Clcn4-201ENSMUST00000000619 FcgbpE9Q0B5 2583 aa6.66□□□□□ -1.34
Clcn4-201ENSMUST00000000619 2310050C09RikG5E8Z3 280 aa6.66□□□□□ -1.34
Clcn4-201ENSMUST00000000619 2310034C09RikQ9D746 214 aa6.66□□□□□ -1.34
Clcn4-201ENSMUST00000000619 Gm20538F6Z9R1 75 aa6.64□□□□□ -1.35
Clcn4-201ENSMUST00000000619 Gm26620Q9CY65 116 aa6.64□□□□□ -1.35
Clcn4-201ENSMUST00000000619 Krtap14O08640 167 aa6.64□□□□□ -1.35
Clcn4-201ENSMUST00000000619 Krtap13O88375 197 aa6.63□□□□□ -1.35
Clcn4-201ENSMUST00000000619 Rnase13Q5GAM7 153 aa6.6□□□□□ -1.35
Clcn4-201ENSMUST00000000619 OxtP35454 125 aa6.58□□□□□ -1.36
Clcn4-201ENSMUST00000000619 4933415A04RikQ9D443 101 aa6.58□□□□□ -1.36
Clcn4-201ENSMUST00000000619 Tnp2P11378 117 aa6.56□□□□□ -1.36
Clcn4-201ENSMUST00000000619 CriptO70333 101 aa6.54□□□□□ -1.36
Clcn4-201ENSMUST00000000619 Krtap10-10A0A1W2P7T6 217 aa6.51□□□□□ -1.37
Clcn4-201ENSMUST00000000619 Gm3646F6S692 53 aa6.5□□□□□ -1.37
Clcn4-201ENSMUST00000000619 Gm9955Q8CEJ8 102 aa6.48□□□□□ -1.37
Clcn4-201ENSMUST00000000619 Gm4491E0CX42 125 aa6.47□□□□□ -1.37
Clcn4-201ENSMUST00000000619 Tenm2Q9WTS5 2764 aa6.46□□□□□ -1.38
Clcn4-201ENSMUST00000000619 Pla2g10Q9QXX3 151 aa6.44□□□□□ -1.38
Clcn4-201ENSMUST00000000619 Muc6Q80T03 2850 aa6.43□□□□□ -1.38
Clcn4-201ENSMUST00000000619 Gm2696A0A1W2P709 240 aa6.41□□□□□ -1.38
Clcn4-201ENSMUST00000000619 Dnah14A0A140LIJ4 4489 aa6.39□□□□□ -1.39
Clcn4-201ENSMUST00000000619 Hspg2Q05793 3707 aaKnown RBP6.38□□□□□ -1.39
Clcn4-201ENSMUST00000000619 Gm9821Q8K076 103 aa6.37□□□□□ -1.39
Clcn4-201ENSMUST00000000619 Megf8P60882 2789 aa6.35□□□□□ -1.39
Clcn4-201ENSMUST00000000619 Gm3880A0A1B0GSB3 72 aa6.35□□□□□ -1.39
Clcn4-201ENSMUST00000000619 1700042G07RikB1AUF7 90 aa6.33□□□□□ -1.4
Clcn4-201ENSMUST00000000619 Gm9918Q8BUR5 174 aa6.28□□□□□ -1.4
Clcn4-201ENSMUST00000000619 Dnah10D3YYQ8 4591 aa6.25□□□□□ -1.41
Clcn4-201ENSMUST00000000619 Spink7Q6IE32 76 aa6.23□□□□□ -1.41
Clcn4-201ENSMUST00000000619 Krtap15-1Q9QZU5 150 aa6.23□□□□□ -1.41
Clcn4-201ENSMUST00000000619 D6Ertd527eA0A0N4SWI3 464 aa6.21□□□□□ -1.41
Clcn4-201ENSMUST00000000619 Gm5767A0A0J9YTU8 78 aa6.21□□□□□ -1.42
Clcn4-201ENSMUST00000000619 Rps29P62274 56 aa6.2□□□□□ -1.42
Clcn4-201ENSMUST00000000619 Dnah7bL7N1Y0 4068 aa6.19□□□□□ -1.42
Clcn4-201ENSMUST00000000619 Rpl37Q9D823 97 aa6.17□□□□□ -1.42
Clcn4-201ENSMUST00000000619 Dnah17Q69Z23 4481 aa6.15□□□□□ -1.42
Clcn4-201ENSMUST00000000619 Huwe1Q7TMY8 4377 aaKnown RBP6.14□□□□□ -1.43
Clcn4-201ENSMUST00000000619 2310079G19RikQ9D6L6 185 aa6.13□□□□□ -1.43
Clcn4-201ENSMUST00000000619 Csmd3Q80T79 3707 aa6.13□□□□□ -1.43
Clcn4-201ENSMUST00000000619 Cox6b2Q80ZN9 88 aa6.12□□□□□ -1.43
Clcn4-201ENSMUST00000000619 Fam229aB2KGE5 128 aa6.12□□□□□ -1.43
Clcn4-201ENSMUST00000000619 Romo1P60603 79 aa6.12□□□□□ -1.43
Clcn4-201ENSMUST00000000619 Camk2n1Q6QWF9 78 aa6.11□□□□□ -1.43
Clcn4-201ENSMUST00000000619 Sec61bQ9CQS8 96 aaKnown RBP6.08□□□□□ -1.44
Clcn4-201ENSMUST00000000619 A930033H14RikG5E8X6 103 aa6.07□□□□□ -1.44
Clcn4-201ENSMUST00000000619 BC029722A0A0N4SW31 51 aa6.04□□□□□ -1.44
Clcn4-201ENSMUST00000000619 Kmt2aP55200 3966 aa6.03□□□□□ -1.44
Clcn4-201ENSMUST00000000619 Dnah3Q8BW94 4083 aa6.03□□□□□ -1.44
Clcn4-201ENSMUST00000000619 Gm10382Q3V0T5 144 aa6.01□□□□□ -1.45
Clcn4-201ENSMUST00000000619 Dnah11E9Q7N9 4488 aa6.01□□□□□ -1.45
Clcn4-201ENSMUST00000000619 Gm5965D3Z724 196 aa5.98□□□□□ -1.45
Clcn4-201ENSMUST00000000619 PlecQ9QXS1 4691 aaKnown RBP5.96□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Dnah6E9Q0B6 4144 aa5.96□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Dnah9B1AR51 4484 aa5.94□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Gm20537G3UYK7 97 aa5.94□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Krtap3-2Q9D638 99 aa5.93□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Krtap3-3Q9D7P0 99 aa5.93□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Gm11939A2A592 99 aa5.92□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Gm19426M0QWC7 77 aa5.92□□□□□ -1.46
Clcn4-201ENSMUST00000000619 Gm9736A0A1W2P7N1 277 aa5.89□□□□□ -1.47
Clcn4-201ENSMUST00000000619 TnxbO35452 4006 aa5.88□□□□□ -1.47
Clcn4-201ENSMUST00000000619 Dnah1E9Q8T7 4250 aa5.86□□□□□ -1.47
Clcn4-201ENSMUST00000000619 Ndufaf8A2AMZ4 74 aa5.84□□□□□ -1.47
Clcn4-201ENSMUST00000000619 PrkdcP97313 4128 aa5.84□□□□□ -1.47
Clcn4-201ENSMUST00000000619 Dnah5Q8VHE6 4621 aa5.82□□□□□ -1.48
Clcn4-201ENSMUST00000000619 Vps13dB1ART2 4390 aa5.79□□□□□ -1.48
Clcn4-201ENSMUST00000000619 Gm9112A2AI92 75 aa5.78□□□□□ -1.48
Clcn4-201ENSMUST00000000619 Dync2h1Q45VK7 4306 aa5.76□□□□□ -1.49
Clcn4-201ENSMUST00000000619 Krtap19-5O08632 62 aa5.74□□□□□ -1.49
Clcn4-201ENSMUST00000000619 Lrp1bQ9JI18 4599 aa5.71□□□□□ -1.5
Clcn4-201ENSMUST00000000619 Gm17416Q30KP4 66 aa5.68□□□□□ -1.5
Clcn4-201ENSMUST00000000619 2310057N15RikQ9D6T8 200 aa5.68□□□□□ -1.5
Clcn4-201ENSMUST00000000619 Gm40193A0A1B0GT39 78 aa5.68□□□□□ -1.5
Clcn4-201ENSMUST00000000619 Gm21887J3QQ04 176 aa5.68□□□□□ -1.5
Clcn4-201ENSMUST00000000619 Stard9Q80TF6 4561 aa5.67□□□□□ -1.5
Clcn4-201ENSMUST00000000619 Dnah2P0C6F1 4456 aa5.64□□□□□ -1.51
Clcn4-201ENSMUST00000000619 Dnah7cA0A087WR13 4024 aa5.63□□□□□ -1.51
Clcn4-201ENSMUST00000000619 ApobE9Q414 4505 aa5.63□□□□□ -1.51
Clcn4-201ENSMUST00000000619 Prm2P07978 107 aa5.62□□□□□ -1.51
Clcn4-201ENSMUST00000000619 2210017I01RikA0A0A6YVV1 95 aa5.59□□□□□ -1.51
Clcn4-201ENSMUST00000000619 Hectd4E9Q2E4 4418 aa5.57□□□□□ -1.52
Clcn4-201ENSMUST00000000619 Fras1Q80T14 4010 aa5.56□□□□□ -1.52
Clcn4-201ENSMUST00000000619 Tnp1P10856 55 aa5.55□□□□□ -1.52
Clcn4-201ENSMUST00000000619 B930094E09RikQ8C4T2 136 aa5.55□□□□□ -1.52
Clcn4-201ENSMUST00000000619 Dnah7aE9Q0T8 4024 aa5.52□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms