RNA–Protein interactions for RNA: ENSMUST00000179226.7

Col4a3bp-203, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 3,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-203ENSMUST00000179226 Ighv8-13A0A075B5Y0 101 aa10.58□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Gm17521F6QAC8 156 aa10.57□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Sox16Q62247 57 aa10.56□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Igkv3-4A0A140T8Q4 119 aa10.56□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Atox1O08997 68 aaKnown RBP10.55□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Csmd3Q80T79 3707 aa10.55□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Notch1Q01705 2531 aa10.55□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Fam168bQ80XQ8 194 aa10.54□□□□□ -0.72
Col4a3bp-203ENSMUST00000179226 Fn1P11276 2477 aaKnown RBP10.52□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 1700018G05RikA0A1B0GSI2 66 aa10.51□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 Fam104aA2A6P4 185 aa10.5□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 Vpreb3D3Z6J4 130 aa10.49□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 Reg3aO09037 175 aa10.47□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 P84750 121 aa10.47□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 Srrm2Q8BTI8 2703 aaKnown RBP10.47□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 Gm21886J3QJU9 214 aa10.47□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 TgO08710 2766 aa10.47□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 Gm10160F6Y577 67 aa10.47□□□□□ -0.73
Col4a3bp-203ENSMUST00000179226 1700074P13RikQ9D9G7 251 aa10.46□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Gm7138L7N2C3 230 aa10.45□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Cmc4Q61908 68 aa10.45□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Gm3238W4VSP7 230 aa10.45□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Dmac1Q9CQ00 111 aa10.44□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Ube2bP63147 152 aa10.44□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Igkv3-12A0A140T8P0 119 aa10.42□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 A0A286YE49 62 aa10.42□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Rpl37aP61514 92 aa10.41□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Wfdc13Q5DQQ6 81 aa10.41□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 1700042G07RikB1AUF7 90 aa10.4□□□□□ -0.74
Col4a3bp-203ENSMUST00000179226 Phxr4P15974 95 aa10.39□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Gm37013Q8K491 104 aa10.39□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Gm7137J3QMW1 236 aa10.39□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Zcchc13Q9D548 170 aa10.38□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Gm36176A0A1W2P8D5 158 aa10.36□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Obox2E9PXV9 151 aa10.36□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Wfdc6bF6ULY1 148 aa10.34□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 B9d2Q3UK10 175 aa10.34□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Gm26620Q9CY65 116 aa10.33□□□□□ -0.75
Col4a3bp-203ENSMUST00000179226 Gm12353A2AGJ4 60 aa10.33□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 VwfQ8CIZ8 2813 aa10.33□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Gm16485Q8C4B7 115 aa10.32□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Gm10267M0QWD8 85 aa10.32□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Chtf8P0CG14 533 aa10.32□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Phxr5P08399 672 aa10.31□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 AplnQ9R0R4 77 aa10.31□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Gm10837Q3UTT8 145 aa10.3□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 U90926O08546 118 aa10.3□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Gm28230A0A0A0MQ91 144 aa10.29□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Gm11627A6PWP4 55 aa10.29□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Igsf10Q3V1M1 2594 aa10.29□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Defb38Q7TNV7 63 aa10.29□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Igkv3-3A0A140T8Q0 119 aa10.28□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Ube2aQ9Z255 152 aa10.28□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Odf3bQ5M8M2 238 aa10.28□□□□□ -0.76
Col4a3bp-203ENSMUST00000179226 Sprr1aQ62266 144 aa10.27□□□□□ -0.77
Col4a3bp-203ENSMUST00000179226 Gm10643Q3URG9 111 aa10.27□□□□□ -0.77
Col4a3bp-203ENSMUST00000179226 Prol1E9PYQ4 312 aa10.24□□□□□ -0.77
Col4a3bp-203ENSMUST00000179226 Gm3646F6S692 53 aa10.22□□□□□ -0.77
Col4a3bp-203ENSMUST00000179226 SptssbQ925E8 76 aa10.21□□□□□ -0.78
Col4a3bp-203ENSMUST00000179226 Wfdc17Q5SSJ1 76 aa10.2□□□□□ -0.78
Col4a3bp-203ENSMUST00000179226 Igkv3-7A0A0G2JE31 119 aa10.17□□□□□ -0.78
Col4a3bp-203ENSMUST00000179226 Dnah7bL7N1Y0 4068 aa10.17□□□□□ -0.78
Col4a3bp-203ENSMUST00000179226 Spata3Q9D9T6 193 aa10.16□□□□□ -0.78
Col4a3bp-203ENSMUST00000179226 OxtP35454 125 aa10.15□□□□□ -0.78
Col4a3bp-203ENSMUST00000179226 Dnah10D3YYQ8 4591 aa10.14□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Chchd10Q7TNL9 138 aa10.14□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Tenm2Q9WTS5 2764 aa10.14□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Gm2310J3QNJ2 377 aa10.12□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Gm20661K7N787 53 aa10.12□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Phf5aP83870 110 aaKnown RBP10.12□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 FasnP19096 2504 aaKnown RBP10.12□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Kmt2aP55200 3966 aa10.11□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Defb10Q8R2I8 73 aa10.1□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Gm10139O88245 57 aa10.09□□□□□ -0.79
Col4a3bp-203ENSMUST00000179226 Sslp1Q3UN54 99 aa10.07□□□□□ -0.8
Col4a3bp-203ENSMUST00000179226 Megf8P60882 2789 aa10.06□□□□□ -0.8
Col4a3bp-203ENSMUST00000179226 Dnah3Q8BW94 4083 aa10.05□□□□□ -0.8
Col4a3bp-203ENSMUST00000179226 Pkd1l1Q8R526 2615 aa10.05□□□□□ -0.8
Col4a3bp-203ENSMUST00000179226 SycnQ8VCK7 134 aa10.01□□□□□ -0.81
Col4a3bp-203ENSMUST00000179226 Dnah14A0A140LIJ4 4489 aa9.98□□□□□ -0.81
Col4a3bp-203ENSMUST00000179226 Ndufb1P0DN34 57 aa9.96□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Gm20604F8WIA3 75 aa9.96□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Wfdc10Q3V2J9 124 aa9.96□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Igkv3-5A0A140T8M6 119 aa9.95□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Gm9821Q8K076 103 aa9.94□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Dnah6E9Q0B6 4144 aa9.93□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Gm9508A0A1W2P7W0 230 aa9.93□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Dnah11E9Q7N9 4488 aa9.92□□□□□ -0.82
Col4a3bp-203ENSMUST00000179226 Stab2Q8R4U0 2559 aa9.89□□□□□ -0.83
Col4a3bp-203ENSMUST00000179226 Ndufs5Q99LY9 106 aa9.89□□□□□ -0.83
Col4a3bp-203ENSMUST00000179226 Dnah1E9Q8T7 4250 aa9.89□□□□□ -0.83
Col4a3bp-203ENSMUST00000179226 Plac8Q9JI48 112 aa9.86□□□□□ -0.83
Col4a3bp-203ENSMUST00000179226 Gm21798J3QNU5 87 aa9.85□□□□□ -0.83
Col4a3bp-203ENSMUST00000179226 Gm10642Q3TWM1 71 aa9.84□□□□□ -0.83
Col4a3bp-203ENSMUST00000179226 Defb9Q8R2I6 67 aa9.84□□□□□ -0.83
Col4a3bp-203ENSMUST00000179226 FcgbpE9Q0B5 2583 aa9.83□□□□□ -0.84
Col4a3bp-203ENSMUST00000179226 Gm4707V9GXN5 68 aa9.82□□□□□ -0.84
Col4a3bp-203ENSMUST00000179226 6030445D17RikE9Q8F9 148 aa9.81□□□□□ -0.84
Col4a3bp-203ENSMUST00000179226 Muc6Q80T03 2850 aa9.79□□□□□ -0.84
Col4a3bp-203ENSMUST00000179226 Anapc11Q9CPX9 84 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms