RNA–Protein interactions for RNA: ENSMUST00000118242.7

Limch1-204, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Limch1, Length 5,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-204ENSMUST00000118242 Kmt2bO08550 2713 aa7.15□□□□□ -1.26
Limch1-204ENSMUST00000118242 Gm19426M0QWC7 77 aa7.15□□□□□ -1.26
Limch1-204ENSMUST00000118242 Gm9195A0A140LHT4 2805 aa7.12□□□□□ -1.27
Limch1-204ENSMUST00000118242 Map1aQ9QYR6 2776 aa7.12□□□□□ -1.27
Limch1-204ENSMUST00000118242 Krtap29-1A2A5X4 342 aa7.12□□□□□ -1.27
Limch1-204ENSMUST00000118242 Dnah12Q3V0Q1 3086 aa7.1□□□□□ -1.27
Limch1-204ENSMUST00000118242 Gm9508A0A1W2P7W0 230 aa7.1□□□□□ -1.27
Limch1-204ENSMUST00000118242 Fn1P11276 2477 aaKnown RBP7.07□□□□□ -1.28
Limch1-204ENSMUST00000118242 Gm7138L7N2C3 230 aa7.07□□□□□ -1.28
Limch1-204ENSMUST00000118242 Gm3238W4VSP7 230 aa7.07□□□□□ -1.28
Limch1-204ENSMUST00000118242 PcntP48725 2898 aa7.06□□□□□ -1.28
Limch1-204ENSMUST00000118242 D6Ertd527eA0A0N4SWI3 464 aa7.05□□□□□ -1.28
Limch1-204ENSMUST00000118242 2310050C09RikG5E8Z3 280 aa7.05□□□□□ -1.28
Limch1-204ENSMUST00000118242 Sec61bQ9CQS8 96 aaKnown RBP7.03□□□□□ -1.28
Limch1-204ENSMUST00000118242 BC029722A0A0N4SW31 51 aa7.03□□□□□ -1.28
Limch1-204ENSMUST00000118242 Ep400Q8CHI8 3072 aaKnown RBP7.02□□□□□ -1.29
Limch1-204ENSMUST00000118242 Krtap15-1Q9QZU5 150 aa7.02□□□□□ -1.29
Limch1-204ENSMUST00000118242 Notch1Q01705 2531 aa7.02□□□□□ -1.29
Limch1-204ENSMUST00000118242 Ankrd11E9Q4F7 2643 aa7.02□□□□□ -1.29
Limch1-204ENSMUST00000118242 FlnaQ8BTM8 2647 aaKnown RBP7.01□□□□□ -1.29
Limch1-204ENSMUST00000118242 Cep350E9Q309 3095 aa7□□□□□ -1.29
Limch1-204ENSMUST00000118242 FasnP19096 2504 aaKnown RBP7□□□□□ -1.29
Limch1-204ENSMUST00000118242 Gm5767A0A0J9YTU8 78 aa6.99□□□□□ -1.29
Limch1-204ENSMUST00000118242 CicQ924A2 2510 aa6.97□□□□□ -1.29
Limch1-204ENSMUST00000118242 NipblQ6KCD5 2798 aaKnown RBP6.97□□□□□ -1.29
Limch1-204ENSMUST00000118242 Gm40193A0A1B0GT39 78 aa6.96□□□□□ -1.29
Limch1-204ENSMUST00000118242 Usp24B1AY13 2617 aaKnown RBP6.96□□□□□ -1.3
Limch1-204ENSMUST00000118242 Prm2P07978 107 aa6.95□□□□□ -1.3
Limch1-204ENSMUST00000118242 Gm42715A0A087WP63 3095 aaKnown RBP6.93□□□□□ -1.3
Limch1-204ENSMUST00000118242 Krtap13O88375 197 aa6.92□□□□□ -1.3
Limch1-204ENSMUST00000118242 Gm20537G3UYK7 97 aa6.9□□□□□ -1.31
Limch1-204ENSMUST00000118242 Rps29P62274 56 aa6.88□□□□□ -1.31
Limch1-204ENSMUST00000118242 Gm7137J3QMW1 236 aa6.87□□□□□ -1.31
Limch1-204ENSMUST00000118242 Cfap54Q8C6S9 3106 aa6.83□□□□□ -1.32
Limch1-204ENSMUST00000118242 Tnp2P11378 117 aa6.82□□□□□ -1.32
Limch1-204ENSMUST00000118242 Bod1lE9Q6J5 3032 aa6.82□□□□□ -1.32
Limch1-204ENSMUST00000118242 Tnrc18Q80WC3 2878 aa6.81□□□□□ -1.32
Limch1-204ENSMUST00000118242 Jbts17Q8CE72 3214 aa6.81□□□□□ -1.32
Limch1-204ENSMUST00000118242 Lama2Q60675 3118 aaKnown RBP6.81□□□□□ -1.32
Limch1-204ENSMUST00000118242 Gm17349F7BGH6 99 aa6.8□□□□□ -1.32
Limch1-204ENSMUST00000118242 Prune2Q52KR3 3084 aa6.79□□□□□ -1.32
Limch1-204ENSMUST00000118242 Chd6A3KFM7 2711 aa6.78□□□□□ -1.32
Limch1-204ENSMUST00000118242 2310061N02RikQ9D6S9 174 aa6.78□□□□□ -1.32
Limch1-204ENSMUST00000118242 UtrnE9Q6R7 3430 aa6.78□□□□□ -1.32
Limch1-204ENSMUST00000118242 Gm5965D3Z724 196 aa6.77□□□□□ -1.33
Limch1-204ENSMUST00000118242 Gm21887J3QQ04 176 aa6.76□□□□□ -1.33
Limch1-204ENSMUST00000118242 FlnbQ80X90 2602 aaKnown RBP6.75□□□□□ -1.33
Limch1-204ENSMUST00000118242 Dmxl1Q6PNC0 3013 aa6.74□□□□□ -1.33
Limch1-204ENSMUST00000118242 AtrQ9JKK8 2635 aa6.73□□□□□ -1.33
Limch1-204ENSMUST00000118242 Ranbp2Q9ERU9 3053 aaKnown RBP6.73□□□□□ -1.33
Limch1-204ENSMUST00000118242 Ash1lQ99MY8 2958 aa6.72□□□□□ -1.33
Limch1-204ENSMUST00000118242 TrioQ0KL02 3102 aa6.71□□□□□ -1.34
Limch1-204ENSMUST00000118242 Chd7A2AJK6 2986 aaKnown RBP6.7□□□□□ -1.34
Limch1-204ENSMUST00000118242 Stab1Q8R4Y4 2571 aa6.69□□□□□ -1.34
Limch1-204ENSMUST00000118242 Hectd1Q69ZR2 2618 aaKnown RBP6.68□□□□□ -1.34
Limch1-204ENSMUST00000118242 Utp20Q5XG71 2788 aaKnown RBP6.68□□□□□ -1.34
Limch1-204ENSMUST00000118242 2310079G19RikQ9D6L6 185 aa6.67□□□□□ -1.34
Limch1-204ENSMUST00000118242 A930033H14RikG5E8X6 103 aa6.66□□□□□ -1.34
Limch1-204ENSMUST00000118242 2310057N15RikQ9D6T8 200 aa6.66□□□□□ -1.34
Limch1-204ENSMUST00000118242 Gm36176A0A1W2P8D5 158 aa6.65□□□□□ -1.34
Limch1-204ENSMUST00000118242 TgO08710 2766 aa6.63□□□□□ -1.35
Limch1-204ENSMUST00000118242 Tep1P97499 2629 aa6.63□□□□□ -1.35
Limch1-204ENSMUST00000118242 Akap13E9Q394 2776 aa6.63□□□□□ -1.35
Limch1-204ENSMUST00000118242 Usp34Q6ZQ93 3582 aa6.61□□□□□ -1.35
Limch1-204ENSMUST00000118242 Tnp1P10856 55 aa6.6□□□□□ -1.35
Limch1-204ENSMUST00000118242 Mki67E9PVX6 3177 aaKnown RBP6.59□□□□□ -1.36
Limch1-204ENSMUST00000118242 Stab2Q8R4U0 2559 aa6.58□□□□□ -1.36
Limch1-204ENSMUST00000118242 BptfA2A654 3036 aaKnown RBP6.58□□□□□ -1.36
Limch1-204ENSMUST00000118242 Frem2Q6NVD0 3160 aa6.58□□□□□ -1.36
Limch1-204ENSMUST00000118242 B930094E09RikQ8C4T2 136 aa6.54□□□□□ -1.36
Limch1-204ENSMUST00000118242 9530053A07RikE9PVG8 2581 aa6.54□□□□□ -1.36
Limch1-204ENSMUST00000118242 Lama3Q61789 3330 aa6.54□□□□□ -1.36
Limch1-204ENSMUST00000118242 Ubr5Q80TP3 2792 aa6.53□□□□□ -1.36
Limch1-204ENSMUST00000118242 Itpr3P70227 2670 aa6.52□□□□□ -1.36
Limch1-204ENSMUST00000118242 Fbn2Q61555 2907 aa6.51□□□□□ -1.37
Limch1-204ENSMUST00000118242 ApcQ61315 2845 aa6.5□□□□□ -1.37
Limch1-204ENSMUST00000118242 Vps13aQ5H8C4 3166 aa6.48□□□□□ -1.37
Limch1-204ENSMUST00000118242 DspE9Q557 2883 aaKnown RBP6.47□□□□□ -1.37
Limch1-204ENSMUST00000118242 Col12a1Q60847 3120 aa6.47□□□□□ -1.37
Limch1-204ENSMUST00000118242 Tex15F8VPN2 2785 aa6.46□□□□□ -1.38
Limch1-204ENSMUST00000118242 Gm9507D3Z5T3 223 aa6.46□□□□□ -1.38
Limch1-204ENSMUST00000118242 KalrnA2CG49 2964 aa6.45□□□□□ -1.38
Limch1-204ENSMUST00000118242 Igsf10Q3V1M1 2594 aa6.45□□□□□ -1.38
Limch1-204ENSMUST00000118242 Mast4Q811L6 2618 aa6.44□□□□□ -1.38
Limch1-204ENSMUST00000118242 Nbeal2Q6ZQA0 2742 aa6.43□□□□□ -1.38
Limch1-204ENSMUST00000118242 Itpr1P11881 2749 aa6.42□□□□□ -1.38
Limch1-204ENSMUST00000118242 Srrm2Q8BTI8 2703 aaKnown RBP6.39□□□□□ -1.39
Limch1-204ENSMUST00000118242 Col6a5A6H584 2640 aa6.38□□□□□ -1.39
Limch1-204ENSMUST00000118242 Krtap10-4Q08EG8 221 aa6.37□□□□□ -1.39
Limch1-204ENSMUST00000118242 FryE9Q8I9 3020 aa6.37□□□□□ -1.39
Limch1-204ENSMUST00000118242 Gm7173A0A0G2JEB6 3132 aa6.36□□□□□ -1.39
Limch1-204ENSMUST00000118242 Pkd1l1Q8R526 2615 aa6.36□□□□□ -1.39
Limch1-204ENSMUST00000118242 MgaA2AWL7 3003 aaKnown RBP6.34□□□□□ -1.39
Limch1-204ENSMUST00000118242 Celsr1O35161 3034 aa6.34□□□□□ -1.39
Limch1-204ENSMUST00000118242 Unc80Q8BLN6 3261 aa6.34□□□□□ -1.39
Limch1-204ENSMUST00000118242 HttP42859 3119 aa6.32□□□□□ -1.4
Limch1-204ENSMUST00000118242 Rev3lQ61493 3122 aa6.31□□□□□ -1.4
Limch1-204ENSMUST00000118242 Igfn1Q3KNY0 2849 aa6.3□□□□□ -1.4
Limch1-204ENSMUST00000118242 Krtap10-10A0A1W2P7T6 217 aa6.27□□□□□ -1.41
Limch1-204ENSMUST00000118242 Gm17402F6Z0L5 76 aa6.27□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 107 ms