RNA–Protein interactions for RNA: ENSMUST00000112366.7

Scn1a-203, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-203ENSMUST00000112366 Gm40193A0A1B0GT39 78 aa3.35□□□□□ -1.87
Scn1a-203ENSMUST00000112366 Usp34Q6ZQ93 3582 aa3.34□□□□□ -1.87
Scn1a-203ENSMUST00000112366 A730071L15RikQ8C4X0 137 aa3.34□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Gm5767A0A0J9YTU8 78 aa3.33□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Gm3250E9Q1M3 230 aa3.32□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Akap13E9Q394 2776 aa3.32□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Hectd1Q69ZR2 2618 aaKnown RBP3.32□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Sprr1aQ62266 144 aa3.31□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Gcn1E9PVA8 2671 aaKnown RBP3.31□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Krtap13O88375 197 aa3.31□□□□□ -1.88
Scn1a-203ENSMUST00000112366 9530053A07RikE9PVG8 2581 aa3.31□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Gm21887J3QQ04 176 aa3.3□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Tnp1P10856 55 aa3.3□□□□□ -1.88
Scn1a-203ENSMUST00000112366 SmcpP15265 143 aa3.3□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Krtap14O08640 167 aa3.29□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Gm17349F7BGH6 99 aa3.29□□□□□ -1.88
Scn1a-203ENSMUST00000112366 AtrQ9JKK8 2635 aa3.28□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Gm3285A0A1W2P7U0 201 aa3.28□□□□□ -1.88
Scn1a-203ENSMUST00000112366 Map1aQ9QYR6 2776 aa3.26□□□□□ -1.89
Scn1a-203ENSMUST00000112366 Stab1Q8R4Y4 2571 aa3.26□□□□□ -1.89
Scn1a-203ENSMUST00000112366 Mast4Q811L6 2618 aa3.26□□□□□ -1.89
Scn1a-203ENSMUST00000112366 A030005K14RikA0A1Y7VNY1 122 aa3.25□□□□□ -1.89
Scn1a-203ENSMUST00000112366 Chd6A3KFM7 2711 aa3.24□□□□□ -1.89
Scn1a-203ENSMUST00000112366 FlnaQ8BTM8 2647 aaKnown RBP3.24□□□□□ -1.89
Scn1a-203ENSMUST00000112366 Gm2310J3QNJ2 377 aa3.23□□□□□ -1.89
Scn1a-203ENSMUST00000112366 Krtap29-1A2A5X4 342 aa3.23□□□□□ -1.89
Scn1a-203ENSMUST00000112366 Krtap28-10A0A1Y7VP58 119 aa3.22□□□□□ -1.89
Scn1a-203ENSMUST00000112366 Rps29P62274 56 aa3.21□□□□□ -1.9
Scn1a-203ENSMUST00000112366 PcntP48725 2898 aa3.21□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Igsf10Q3V1M1 2594 aa3.21□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Lelp1Q9DAE3 120 aa3.19□□□□□ -1.9
Scn1a-203ENSMUST00000112366 UtrnE9Q6R7 3430 aa3.19□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Prrc2cQ3TLH4 2846 aaKnown RBP3.19□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Prm2P07978 107 aa3.17□□□□□ -1.9
Scn1a-203ENSMUST00000112366 D6Ertd527eA0A0N4SWI3 464 aa3.16□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Zfp292Q9Z2U2 2698 aa3.16□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Gm9195A0A140LHT4 2805 aa3.16□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Gm5965D3Z724 196 aa3.15□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Gm9508A0A1W2P7W0 230 aa3.15□□□□□ -1.9
Scn1a-203ENSMUST00000112366 Tep1P97499 2629 aa3.14□□□□□ -1.91
Scn1a-203ENSMUST00000112366 SrcapA0A087WQ44 3271 aa3.14□□□□□ -1.91
Scn1a-203ENSMUST00000112366 2310057N15RikQ9D6T8 200 aa3.14□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Col6a5A6H584 2640 aa3.14□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Stab2Q8R4U0 2559 aa3.13□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Gm3233E9Q2H5 230 aa3.13□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Gm7138L7N2C3 230 aa3.11□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Gm3238W4VSP7 230 aa3.11□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Itpr1P11881 2749 aa3.1□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Utp20Q5XG71 2788 aaKnown RBP3.09□□□□□ -1.91
Scn1a-203ENSMUST00000112366 Itpr3P70227 2670 aa3.09□□□□□ -1.91
Scn1a-203ENSMUST00000112366 NipblQ6KCD5 2798 aaKnown RBP3.08□□□□□ -1.92
Scn1a-203ENSMUST00000112366 Gm20537G3UYK7 97 aa3.06□□□□□ -1.92
Scn1a-203ENSMUST00000112366 Gm11565A2A4M7 156 aa3.05□□□□□ -1.92
Scn1a-203ENSMUST00000112366 Gm7137J3QMW1 236 aa3.04□□□□□ -1.92
Scn1a-203ENSMUST00000112366 Pkd1l1Q8R526 2615 aa3.04□□□□□ -1.92
Scn1a-203ENSMUST00000112366 B930094E09RikQ8C4T2 136 aa3.03□□□□□ -1.92
Scn1a-203ENSMUST00000112366 Gm7544A0A1Y7VJ58 118 aa3.02□□□□□ -1.93
Scn1a-203ENSMUST00000112366 Tnp2P11378 117 aa3.02□□□□□ -1.93
Scn1a-203ENSMUST00000112366 Ubr5Q80TP3 2792 aa3□□□□□ -1.93
Scn1a-203ENSMUST00000112366 A0A1Y7VJH8 109 aa3□□□□□ -1.93
Scn1a-203ENSMUST00000112366 A030005L19RikA0A1Y7VIU2 113 aa2.99□□□□□ -1.93
Scn1a-203ENSMUST00000112366 4933428G20RikQ9D3X4 101 aa2.98□□□□□ -1.93
Scn1a-203ENSMUST00000112366 Gm42715A0A087WP63 3095 aaKnown RBP2.98□□□□□ -1.93
Scn1a-203ENSMUST00000112366 Golgb1E9PVZ8 3238 aa2.96□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Nbeal2Q6ZQA0 2742 aa2.95□□□□□ -1.94
Scn1a-203ENSMUST00000112366 FcgbpE9Q0B5 2583 aa2.95□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Itpr2Q9Z329 2701 aa2.95□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Tnrc18Q80WC3 2878 aa2.94□□□□□ -1.94
Scn1a-203ENSMUST00000112366 ApcQ61315 2845 aa2.93□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Ep400Q8CHI8 3072 aaKnown RBP2.93□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Tex15F8VPN2 2785 aa2.92□□□□□ -1.94
Scn1a-203ENSMUST00000112366 CenpfE9Q3P4 2997 aaKnown RBP2.92□□□□□ -1.94
Scn1a-203ENSMUST00000112366 TgO08710 2766 aa2.92□□□□□ -1.94
Scn1a-203ENSMUST00000112366 2310061N02RikQ9D6S9 174 aa2.91□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Gm36176A0A1W2P8D5 158 aa2.91□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Srrm2Q8BTI8 2703 aaKnown RBP2.91□□□□□ -1.94
Scn1a-203ENSMUST00000112366 Gm17402F6Z0L5 76 aa2.9□□□□□ -1.95
Scn1a-203ENSMUST00000112366 A930033H14RikG5E8X6 103 aa2.89□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Krtap28-13A0A087WQP5 138 aa2.89□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Gm17416Q30KP4 66 aa2.89□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Cdh23Q99PF4 3354 aa2.88□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Dnah12Q3V0Q1 3086 aa2.88□□□□□ -1.95
Scn1a-203ENSMUST00000112366 TrioQ0KL02 3102 aa2.86□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Gm9507D3Z5T3 223 aa2.85□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Cep350E9Q309 3095 aa2.85□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Prune2Q52KR3 3084 aa2.85□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Wdfy3Q6VNB8 3508 aa2.85□□□□□ -1.95
Scn1a-203ENSMUST00000112366 2310079G19RikQ9D6L6 185 aa2.85□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Hivep1Q03172 2688 aa2.85□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Jbts17Q8CE72 3214 aa2.84□□□□□ -1.95
Scn1a-203ENSMUST00000112366 Muc2Q80Z19 2680 aa2.84□□□□□ -1.96
Scn1a-203ENSMUST00000112366 Krtap10-4Q08EG8 221 aa2.83□□□□□ -1.96
Scn1a-203ENSMUST00000112366 FlncQ8VHX6 2726 aaKnown RBP2.82□□□□□ -1.96
Scn1a-203ENSMUST00000112366 Krtap10-10A0A1W2P7T6 217 aa2.81□□□□□ -1.96
Scn1a-203ENSMUST00000112366 Lama2Q60675 3118 aaKnown RBP2.81□□□□□ -1.96
Scn1a-203ENSMUST00000112366 VcanQ62059 3357 aa2.79□□□□□ -1.96
Scn1a-203ENSMUST00000112366 Lama3Q61789 3330 aa2.79□□□□□ -1.96
Scn1a-203ENSMUST00000112366 Megf8P60882 2789 aa2.78□□□□□ -1.96
Scn1a-203ENSMUST00000112366 Ash1lQ99MY8 2958 aa2.77□□□□□ -1.97
Scn1a-203ENSMUST00000112366 Myo15bI7HPW8 3033 aa2.76□□□□□ -1.97
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms