RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 SrcapA0A087WQ44 3271 aa11,79□□□□□ -0,52
Trim71-201ENSMUST00000111816 Ubr5Q80TP3 2792 aa11,78□□□□□ -0,52
Trim71-201ENSMUST00000111816 Gm10320E9PW43 113 aa11,78□□□□□ -0,52
Trim71-201ENSMUST00000111816 Odf3bQ5M8M2 238 aa11,78□□□□□ -0,52
Trim71-201ENSMUST00000111816 Zcchc13Q9D548 170 aa11,78□□□□□ -0,52
Trim71-201ENSMUST00000111816 Fam229aB2KGE5 128 aa11,77□□□□□ -0,53
Trim71-201ENSMUST00000111816 Fam104aA2A6P4 185 aa11,77□□□□□ -0,53
Trim71-201ENSMUST00000111816 Itpr1P11881 2749 aa11,74□□□□□ -0,53
Trim71-201ENSMUST00000111816 Gm37013Q8K491 104 aa11,73□□□□□ -0,53
Trim71-201ENSMUST00000111816 Bod1lE9Q6J5 3032 aa11,7□□□□□ -0,54
Trim71-201ENSMUST00000111816 Anapc11Q9CPX9 84 aa11,69□□□□□ -0,54
Trim71-201ENSMUST00000111816 Gm42715A0A087WP63 3095 aaKnown RBP11,67□□□□□ -0,54
Trim71-201ENSMUST00000111816 Ash1lQ99MY8 2958 aa11,67□□□□□ -0,54
Trim71-201ENSMUST00000111816 Rpl37Q9D823 97 aa11,66□□□□□ -0,54
Trim71-201ENSMUST00000111816 Ndufaf8A2AMZ4 74 aa11,65□□□□□ -0,54
Trim71-201ENSMUST00000111816 4933415A04RikQ9D443 101 aa11,65□□□□□ -0,55
Trim71-201ENSMUST00000111816 Tex15F8VPN2 2785 aa11,64□□□□□ -0,55
Trim71-201ENSMUST00000111816 Nbeal2Q6ZQA0 2742 aa11,63□□□□□ -0,55
Trim71-201ENSMUST00000111816 Gm10382Q3V0T5 144 aa11,63□□□□□ -0,55
Trim71-201ENSMUST00000111816 Dnah12Q3V0Q1 3086 aa11,62□□□□□ -0,55
Trim71-201ENSMUST00000111816 OxtP35454 125 aa11,62□□□□□ -0,55
Trim71-201ENSMUST00000111816 Cep350E9Q309 3095 aa11,61□□□□□ -0,55
Trim71-201ENSMUST00000111816 Gm9112A2AI92 75 aa11,51□□□□□ -0,57
Trim71-201ENSMUST00000111816 DspE9Q557 2883 aaKnown RBP11,48□□□□□ -0,57
Trim71-201ENSMUST00000111816 KalrnA2CG49 2964 aa11,47□□□□□ -0,57
Trim71-201ENSMUST00000111816 Gm10065F6TJM2 114 aa11,47□□□□□ -0,57
Trim71-201ENSMUST00000111816 Prune2Q52KR3 3084 aa11,46□□□□□ -0,57
Trim71-201ENSMUST00000111816 Plac8Q9JI48 112 aa11,46□□□□□ -0,57
Trim71-201ENSMUST00000111816 NbdyA0A0N4SUI7 68 aa11,46□□□□□ -0,58
Trim71-201ENSMUST00000111816 Lama2Q60675 3118 aaKnown RBP11,44□□□□□ -0,58
Trim71-201ENSMUST00000111816 Cystm1Q8K353 104 aa11,43□□□□□ -0,58
Trim71-201ENSMUST00000111816 Cox6b2Q80ZN9 88 aa11,39□□□□□ -0,59
Trim71-201ENSMUST00000111816 Ep400Q8CHI8 3072 aaKnown RBP11,36□□□□□ -0,59
Trim71-201ENSMUST00000111816 Srrm2Q8BTI8 2703 aaKnown RBP11,33□□□□□ -0,6
Trim71-201ENSMUST00000111816 FcgbpE9Q0B5 2583 aa11,31□□□□□ -0,6
Trim71-201ENSMUST00000111816 BC029722A0A0N4SW31 51 aa11,31□□□□□ -0,6
Trim71-201ENSMUST00000111816 Zzef1Q5SSH7 2924 aa11,3□□□□□ -0,6
Trim71-201ENSMUST00000111816 Krtap15-1Q9QZU5 150 aa11,3□□□□□ -0,6
Trim71-201ENSMUST00000111816 Gm19426M0QWC7 77 aa11,26□□□□□ -0,61
Trim71-201ENSMUST00000111816 SmcpP15265 143 aa11,25□□□□□ -0,61
Trim71-201ENSMUST00000111816 Gm21887J3QQ04 176 aa11,19□□□□□ -0,62
Trim71-201ENSMUST00000111816 FrylF8VQ05 3007 aa11,18□□□□□ -0,62
Trim71-201ENSMUST00000111816 Dmxl1Q6PNC0 3013 aa11,17□□□□□ -0,62
Trim71-201ENSMUST00000111816 Ranbp2Q9ERU9 3053 aaKnown RBP11,16□□□□□ -0,62
Trim71-201ENSMUST00000111816 Gm10139O88245 57 aa11,15□□□□□ -0,62
Trim71-201ENSMUST00000111816 Tnrc18Q80WC3 2878 aa11,13□□□□□ -0,63
Trim71-201ENSMUST00000111816 Gm16253D3Z167 63 aa11,11□□□□□ -0,63
Trim71-201ENSMUST00000111816 Gm40193A0A1B0GT39 78 aa11,1□□□□□ -0,63
Trim71-201ENSMUST00000111816 UtrnE9Q6R7 3430 aa11,1□□□□□ -0,63
Trim71-201ENSMUST00000111816 BptfA2A654 3036 aaKnown RBP11,09□□□□□ -0,63
Trim71-201ENSMUST00000111816 A730071L15RikQ8C4X0 137 aa11,03□□□□□ -0,64
Trim71-201ENSMUST00000111816 2310050C09RikG5E8Z3 280 aa11,03□□□□□ -0,64
Trim71-201ENSMUST00000111816 Hivep1Q03172 2688 aa11,01□□□□□ -0,65
Trim71-201ENSMUST00000111816 Gm5767A0A0J9YTU8 78 aa11□□□□□ -0,65
Trim71-201ENSMUST00000111816 Gm3250E9Q1M3 230 aa10,98□□□□□ -0,65
Trim71-201ENSMUST00000111816 Chd9Q8BYH8 2885 aa10,98□□□□□ -0,65
Trim71-201ENSMUST00000111816 Nf1Q04690 2841 aa10,97□□□□□ -0,65
Trim71-201ENSMUST00000111816 Muc2Q80Z19 2680 aa10,96□□□□□ -0,65
Trim71-201ENSMUST00000111816 FlncQ8VHX6 2726 aaKnown RBP10,96□□□□□ -0,66
Trim71-201ENSMUST00000111816 Gm3285A0A1W2P7U0 201 aa10,94□□□□□ -0,66
Trim71-201ENSMUST00000111816 MgaA2AWL7 3003 aaKnown RBP10,94□□□□□ -0,66
Trim71-201ENSMUST00000111816 Myo15bI7HPW8 3033 aa10,93□□□□□ -0,66
Trim71-201ENSMUST00000111816 FryE9Q8I9 3020 aa10,93□□□□□ -0,66
Trim71-201ENSMUST00000111816 Lama1P19137 3084 aa10,93□□□□□ -0,66
Trim71-201ENSMUST00000111816 Chd7A2AJK6 2986 aaKnown RBP10,92□□□□□ -0,66
Trim71-201ENSMUST00000111816 Krtap13O88375 197 aa10,89□□□□□ -0,67
Trim71-201ENSMUST00000111816 Sprr1aQ62266 144 aa10,88□□□□□ -0,67
Trim71-201ENSMUST00000111816 Tenm1Q9WTS4 2731 aa10,87□□□□□ -0,67
Trim71-201ENSMUST00000111816 Fbn2Q61555 2907 aa10,86□□□□□ -0,67
Trim71-201ENSMUST00000111816 Krtap14O08640 167 aa10,84□□□□□ -0,67
Trim71-201ENSMUST00000111816 Vps13aQ5H8C4 3166 aa10,84□□□□□ -0,67
Trim71-201ENSMUST00000111816 TrioQ0KL02 3102 aa10,83□□□□□ -0,68
Trim71-201ENSMUST00000111816 TgO08710 2766 aa10,82□□□□□ -0,68
Trim71-201ENSMUST00000111816 Mki67E9PVX6 3177 aaKnown RBP10,82□□□□□ -0,68
Trim71-201ENSMUST00000111816 Tnp1P10856 55 aa10,82□□□□□ -0,68
Trim71-201ENSMUST00000111816 Dmxl2Q8BPN8 3032 aa10,77□□□□□ -0,69
Trim71-201ENSMUST00000111816 LrbaQ9ESE1 2856 aa10,77□□□□□ -0,69
Trim71-201ENSMUST00000111816 Igfn1Q3KNY0 2849 aa10,75□□□□□ -0,69
Trim71-201ENSMUST00000111816 Gm17349F7BGH6 99 aa10,75□□□□□ -0,69
Trim71-201ENSMUST00000111816 Krtap29-1A2A5X4 342 aa10,73□□□□□ -0,69
Trim71-201ENSMUST00000111816 Pdzd2E9Q1M1 2796 aa10,72□□□□□ -0,69
Trim71-201ENSMUST00000111816 Wdfy4E9Q2M9 3149 aa10,71□□□□□ -0,69
Trim71-201ENSMUST00000111816 Gm2310J3QNJ2 377 aa10,71□□□□□ -0,69
Trim71-201ENSMUST00000111816 Trank1Q8BV79 2999 aa10,69□□□□□ -0,7
Trim71-201ENSMUST00000111816 Cfap54Q8C6S9 3106 aa10,66□□□□□ -0,7
Trim71-201ENSMUST00000111816 Tenm3Q9WTS6 2715 aa10,64□□□□□ -0,71
Trim71-201ENSMUST00000111816 Prm2P07978 107 aa10,63□□□□□ -0,71
Trim71-201ENSMUST00000111816 Rps29P62274 56 aa10,63□□□□□ -0,71
Trim71-201ENSMUST00000111816 Unc80Q8BLN6 3261 aa10,62□□□□□ -0,71
Trim71-201ENSMUST00000111816 AtmQ62388 3066 aa10,61□□□□□ -0,71
Trim71-201ENSMUST00000111816 Rev3lQ61493 3122 aa10,61□□□□□ -0,71
Trim71-201ENSMUST00000111816 Frem2Q6NVD0 3160 aa10,59□□□□□ -0,71
Trim71-201ENSMUST00000111816 NbeaQ9EPN1 2936 aa10,56□□□□□ -0,72
Trim71-201ENSMUST00000111816 Usp34Q6ZQ93 3582 aa10,53□□□□□ -0,72
Trim71-201ENSMUST00000111816 Gm7173A0A0G2JEB6 3132 aa10,52□□□□□ -0,73
Trim71-201ENSMUST00000111816 Lama3Q61789 3330 aa10,5□□□□□ -0,73
Trim71-201ENSMUST00000111816 2310057N15RikQ9D6T8 200 aa10,43□□□□□ -0,74
Trim71-201ENSMUST00000111816 Gm5965D3Z724 196 aa10,37□□□□□ -0,75
Trim71-201ENSMUST00000111816 Celsr2Q9R0M0 2920 aa10,37□□□□□ -0,75
Trim71-201ENSMUST00000111816 D6Ertd527eA0A0N4SWI3 464 aa10,35□□□□□ -0,75
Retrieved 100 of 22,080 RNA–protein pairs in 10,7 ms