RNA–Protein interactions for RNA: ENSMUST00000111760.2

Nckap1-202, Transcript of Nck-associated protein 1, mousemouse

TSL 1 (best) BASIC

Gene Nckap1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-202ENSMUST00000111760 Adgrg4B7ZCC9 3073 aa13,72□□□□□ -0,21
Nckap1-202ENSMUST00000111760 Gm10999F6Q4M4 69 aa13,71□□□□□ -0,21
Nckap1-202ENSMUST00000111760 1810062G17RikG3X8Y2 129 aa13,7□□□□□ -0,22
Nckap1-202ENSMUST00000111760 Spaca4Q80ZQ0 127 aa13,7□□□□□ -0,22
Nckap1-202ENSMUST00000111760 Gpr15lA0A0B4J1N3 78 aa13,69□□□□□ -0,22
Nckap1-202ENSMUST00000111760 C530025M09RikF6RGA8 229 aa13,65□□□□□ -0,22
Nckap1-202ENSMUST00000111760 Tex15F8VPN2 2785 aa13,65□□□□□ -0,22
Nckap1-202ENSMUST00000111760 Gm7138L7N2C3 230 aa13,64□□□□□ -0,23
Nckap1-202ENSMUST00000111760 Gm3238W4VSP7 230 aa13,64□□□□□ -0,23
Nckap1-202ENSMUST00000111760 DspE9Q557 2883 aaKnown RBP13,64□□□□□ -0,23
Nckap1-202ENSMUST00000111760 VcanQ62059 3357 aa13,64□□□□□ -0,23
Nckap1-202ENSMUST00000111760 A930002H24RikQ8C8Y3 163 aa13,63□□□□□ -0,23
Nckap1-202ENSMUST00000111760 9530053A07RikE9PVG8 2581 aa13,61□□□□□ -0,23
Nckap1-202ENSMUST00000111760 Gm27235Q3UW50 83 aa13,6□□□□□ -0,23
Nckap1-202ENSMUST00000111760 A330070K13RikQ8CA53 115 aa13,59□□□□□ -0,23
Nckap1-202ENSMUST00000111760 Gm7137J3QMW1 236 aa13,57□□□□□ -0,24
Nckap1-202ENSMUST00000111760 Stab2Q8R4U0 2559 aa13,57□□□□□ -0,24
Nckap1-202ENSMUST00000111760 FlncQ8VHX6 2726 aaKnown RBP13,56□□□□□ -0,24
Nckap1-202ENSMUST00000111760 Utp20Q5XG71 2788 aaKnown RBP13,56□□□□□ -0,24
Nckap1-202ENSMUST00000111760 Dchs2A0A0A6YW72 3346 aa13,56□□□□□ -0,24
Nckap1-202ENSMUST00000111760 Coa5Q99M07 74 aa13,54□□□□□ -0,24
Nckap1-202ENSMUST00000111760 Cdc42se1Q8BHL7 80 aa13,53□□□□□ -0,24
Nckap1-202ENSMUST00000111760 Gm20661K7N787 53 aa13,53□□□□□ -0,24
Nckap1-202ENSMUST00000111760 Limd2Q8BGB5 128 aa13,52□□□□□ -0,25
Nckap1-202ENSMUST00000111760 Gm17606F6ZL36 78 aa13,51□□□□□ -0,25
Nckap1-202ENSMUST00000111760 Defb1P56386 69 aa13,49□□□□□ -0,25
Nckap1-202ENSMUST00000111760 Q8BGJ3 129 aa13,47□□□□□ -0,25
Nckap1-202ENSMUST00000111760 RetnlbQ99P86 105 aa13,46□□□□□ -0,25
Nckap1-202ENSMUST00000111760 Gm7276Q3TYW4 209 aa13,43□□□□□ -0,26
Nckap1-202ENSMUST00000111760 Igfn1Q3KNY0 2849 aa13,42□□□□□ -0,26
Nckap1-202ENSMUST00000111760 4930507D05RikQ8C9C9 103 aa13,41□□□□□ -0,26
Nckap1-202ENSMUST00000111760 Fam229bQ8CF36 80 aa13,4□□□□□ -0,26
Nckap1-202ENSMUST00000111760 Zzef1Q5SSH7 2924 aa13,39□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Plac8Q9JI48 112 aa13,39□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Gm11213A0A1B0GR83 88 aa13,38□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Defb9Q8R2I6 67 aa13,37□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Dchs1E9PVD3 3291 aa13,37□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Anapc11Q9CPX9 84 aa13,36□□□□□ -0,27
Nckap1-202ENSMUST00000111760 AW011738F6S7Q2 159 aa13,36□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Phxr5P08399 672 aa13,36□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Chd9Q8BYH8 2885 aa13,34□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Phxr4P15974 95 aa13,34□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Celsr2Q9R0M0 2920 aa13,34□□□□□ -0,27
Nckap1-202ENSMUST00000111760 Gm12216A0A1W2P827 62 aa13,32□□□□□ -0,28
Nckap1-202ENSMUST00000111760 Smim29Q8R043 75 aa13,32□□□□□ -0,28
Nckap1-202ENSMUST00000111760 CnbpP53996 178 aaKnown RBP13,31□□□□□ -0,28
Nckap1-202ENSMUST00000111760 Myo15aQ9QZZ4 3511 aa13,31□□□□□ -0,28
Nckap1-202ENSMUST00000111760 Cypt15B1AXS0 87 aa13,28□□□□□ -0,28
Nckap1-202ENSMUST00000111760 Itpr2Q9Z329 2701 aa13,27□□□□□ -0,28
Nckap1-202ENSMUST00000111760 Wdfy3Q6VNB8 3508 aa13,27□□□□□ -0,29
Nckap1-202ENSMUST00000111760 Chtf8P0CG14 533 aa13,25□□□□□ -0,29
Nckap1-202ENSMUST00000111760 Trank1Q8BV79 2999 aa13,21□□□□□ -0,29
Nckap1-202ENSMUST00000111760 Gm10320E9PW43 113 aa13,21□□□□□ -0,29
Nckap1-202ENSMUST00000111760 Fam104aA2A6P4 185 aa13,18□□□□□ -0,3
Nckap1-202ENSMUST00000111760 Zcchc13Q9D548 170 aa13,16□□□□□ -0,3
Nckap1-202ENSMUST00000111760 Gm36176A0A1W2P8D5 158 aa13,15□□□□□ -0,3
Nckap1-202ENSMUST00000111760 Nf1Q04690 2841 aa13,15□□□□□ -0,3
Nckap1-202ENSMUST00000111760 RelnQ60841 3461 aa13,11□□□□□ -0,31
Nckap1-202ENSMUST00000111760 Uqcr11Q9CPX8 56 aa13,08□□□□□ -0,32
Nckap1-202ENSMUST00000111760 SpegQ62407 3262 aa13,07□□□□□ -0,32
Nckap1-202ENSMUST00000111760 Cystm1Q8K353 104 aa13,01□□□□□ -0,33
Nckap1-202ENSMUST00000111760 LrbaQ9ESE1 2856 aa12,96□□□□□ -0,33
Nckap1-202ENSMUST00000111760 DmdP11531 3678 aa12,96□□□□□ -0,34
Nckap1-202ENSMUST00000111760 OxtP35454 125 aa12,95□□□□□ -0,34
Nckap1-202ENSMUST00000111760 2310034C09RikQ9D746 214 aa12,93□□□□□ -0,34
Nckap1-202ENSMUST00000111760 Gm10065F6TJM2 114 aa12,92□□□□□ -0,34
Nckap1-202ENSMUST00000111760 Gm17349F7BGH6 99 aa12,92□□□□□ -0,34
Nckap1-202ENSMUST00000111760 Rnase13Q5GAM7 153 aa12,9□□□□□ -0,34
Nckap1-202ENSMUST00000111760 Gm26620Q9CY65 116 aa12,9□□□□□ -0,34
Nckap1-202ENSMUST00000111760 Gm9508A0A1W2P7W0 230 aa12,9□□□□□ -0,34
Nckap1-202ENSMUST00000111760 Mp68P56379 58 aa12,89□□□□□ -0,35
Nckap1-202ENSMUST00000111760 Cypt14J3QPF7 87 aa12,88□□□□□ -0,35
Nckap1-202ENSMUST00000111760 NbdyA0A0N4SUI7 68 aa12,86□□□□□ -0,35
Nckap1-202ENSMUST00000111760 Gm10643Q3URG9 111 aa12,86□□□□□ -0,35
Nckap1-202ENSMUST00000111760 Sprr1aQ62266 144 aa12,86□□□□□ -0,35
Nckap1-202ENSMUST00000111760 FcgbpE9Q0B5 2583 aa12,85□□□□□ -0,35
Nckap1-202ENSMUST00000111760 Tenm3Q9WTS6 2715 aa12,85□□□□□ -0,35
Nckap1-202ENSMUST00000111760 Pdzd2E9Q1M1 2796 aa12,85□□□□□ -0,35
Nckap1-202ENSMUST00000111760 Tenm4Q3UHK6 2771 aa12,82□□□□□ -0,36
Nckap1-202ENSMUST00000111760 Gm21798J3QNU5 87 aa12,81□□□□□ -0,36
Nckap1-202ENSMUST00000111760 6030445D17RikE9Q8F9 148 aa12,79□□□□□ -0,36
Nckap1-202ENSMUST00000111760 A730071L15RikQ8C4X0 137 aa12,79□□□□□ -0,36
Nckap1-202ENSMUST00000111760 ApcQ61315 2845 aa12,73□□□□□ -0,37
Nckap1-202ENSMUST00000111760 Gm10139O88245 57 aa12,71□□□□□ -0,37
Nckap1-202ENSMUST00000111760 Helz2E9QAM5 2947 aaKnown RBP12,7□□□□□ -0,38
Nckap1-202ENSMUST00000111760 TgO08710 2766 aa12,69□□□□□ -0,38
Nckap1-202ENSMUST00000111760 Srrm2Q8BTI8 2703 aaKnown RBP12,68□□□□□ -0,38
Nckap1-202ENSMUST00000111760 SpenQ62504 3644 aaKnown RBP12,67□□□□□ -0,38
Nckap1-202ENSMUST00000111760 Akap9Q70FJ1 3797 aa12,67□□□□□ -0,38
Nckap1-202ENSMUST00000111760 Odf3bQ5M8M2 238 aa12,65□□□□□ -0,38
Nckap1-202ENSMUST00000111760 Muc5acE9QAQ8 3455 aa12,55□□□□□ -0,4
Nckap1-202ENSMUST00000111760 Gm3880A0A1B0GSB3 72 aa12,54□□□□□ -0,4
Nckap1-202ENSMUST00000111760 Csmd1Q923L3 3564 aa12,5□□□□□ -0,41
Nckap1-202ENSMUST00000111760 Gm4491E0CX42 125 aa12,5□□□□□ -0,41
Nckap1-202ENSMUST00000111760 Gm9507D3Z5T3 223 aa12,48□□□□□ -0,41
Nckap1-202ENSMUST00000111760 Gm16253D3Z167 63 aa12,46□□□□□ -0,41
Nckap1-202ENSMUST00000111760 Gm37013Q8K491 104 aa12,44□□□□□ -0,42
Nckap1-202ENSMUST00000111760 Vps13cQ8BX70 3748 aa12,43□□□□□ -0,42
Nckap1-202ENSMUST00000111760 Zfhx4Q9JJN2 3550 aa12,42□□□□□ -0,42
Nckap1-202ENSMUST00000111760 2310061N02RikQ9D6S9 174 aa12,4□□□□□ -0,42
Retrieved 100 of 22,080 RNA–protein pairs in 53,5 ms