RNA–Protein interactions for RNA: ENSMUST00000111564.7

Clip1-204, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clip1, Length 5,609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-204ENSMUST00000111564 Usp9yF8VPU6 2556 aa7.25□□□□□ -1.25
Clip1-204ENSMUST00000111564 Smr3aQ61900 147 aa7.23□□□□□ -1.25
Clip1-204ENSMUST00000111564 CicQ924A2 2510 aa7.23□□□□□ -1.25
Clip1-204ENSMUST00000111564 Fam168bQ80XQ8 194 aa7.23□□□□□ -1.25
Clip1-204ENSMUST00000111564 Pla2g10Q9QXX3 151 aa7.23□□□□□ -1.25
Clip1-204ENSMUST00000111564 Gm10770F7D043 238 aa7.22□□□□□ -1.25
Clip1-204ENSMUST00000111564 7530416G11RikJ3QJX6 159 aa7.22□□□□□ -1.25
Clip1-204ENSMUST00000111564 FlnbQ80X90 2602 aaKnown RBP7.22□□□□□ -1.25
Clip1-204ENSMUST00000111564 Rnase13Q5GAM7 153 aa7.22□□□□□ -1.25
Clip1-204ENSMUST00000111564 Csmd1Q923L3 3564 aa7.22□□□□□ -1.25
Clip1-204ENSMUST00000111564 Gcn1E9PVA8 2671 aaKnown RBP7.22□□□□□ -1.25
Clip1-204ENSMUST00000111564 4930518I15RikQ3V2W7 57 aa7.21□□□□□ -1.25
Clip1-204ENSMUST00000111564 Sostdc1Q9CQN4 206 aa7.21□□□□□ -1.26
Clip1-204ENSMUST00000111564 Gm10772F7AIG4 85 aa7.21□□□□□ -1.26
Clip1-204ENSMUST00000111564 Cmya5Q70KF4 3739 aa7.2□□□□□ -1.26
Clip1-204ENSMUST00000111564 Svep1A2AVA0 3567 aa7.2□□□□□ -1.26
Clip1-204ENSMUST00000111564 Krtap26-1Q9D7N2 215 aa7.19□□□□□ -1.26
Clip1-204ENSMUST00000111564 Celsr2Q9R0M0 2920 aa7.17□□□□□ -1.26
Clip1-204ENSMUST00000111564 Sprr4Q8CGN8 76 aa7.16□□□□□ -1.26
Clip1-204ENSMUST00000111564 Krtap11-1E9Q2E9 183 aa7.15□□□□□ -1.27
Clip1-204ENSMUST00000111564 Cypt15B1AXS0 87 aa7.14□□□□□ -1.27
Clip1-204ENSMUST00000111564 Gm9821Q8K076 103 aa7.14□□□□□ -1.27
Clip1-204ENSMUST00000111564 Defb9Q8R2I6 67 aa7.13□□□□□ -1.27
Clip1-204ENSMUST00000111564 Plac8Q9JI48 112 aa7.12□□□□□ -1.27
Clip1-204ENSMUST00000111564 Gm26620Q9CY65 116 aa7.12□□□□□ -1.27
Clip1-204ENSMUST00000111564 LrbaQ9ESE1 2856 aa7.1□□□□□ -1.27
Clip1-204ENSMUST00000111564 Gm11213A0A1B0GR83 88 aa7.1□□□□□ -1.27
Clip1-204ENSMUST00000111564 A330070K13RikQ8CA53 115 aa7.1□□□□□ -1.27
Clip1-204ENSMUST00000111564 OtogO55225 2910 aa7.09□□□□□ -1.27
Clip1-204ENSMUST00000111564 Cdc42se1Q8BHL7 80 aa7.08□□□□□ -1.28
Clip1-204ENSMUST00000111564 Krtap16-1A2A5X5 502 aa7.06□□□□□ -1.28
Clip1-204ENSMUST00000111564 FasnP19096 2504 aaKnown RBP7.06□□□□□ -1.28
Clip1-204ENSMUST00000111564 Anapc11Q9CPX9 84 aa7.06□□□□□ -1.28
Clip1-204ENSMUST00000111564 AY074887Q8R5F9 132 aa7.05□□□□□ -1.28
Clip1-204ENSMUST00000111564 Gm10308Q9CVR5 141 aa7.05□□□□□ -1.28
Clip1-204ENSMUST00000111564 Gm3233E9Q2H5 230 aa7.04□□□□□ -1.28
Clip1-204ENSMUST00000111564 Sprr1bQ62267 153 aa7.04□□□□□ -1.28
Clip1-204ENSMUST00000111564 A530084C06RikQ3UTW2 186 aa7.04□□□□□ -1.28
Clip1-204ENSMUST00000111564 Phxr5P08399 672 aa7.04□□□□□ -1.28
Clip1-204ENSMUST00000111564 Nf1Q04690 2841 aa7.03□□□□□ -1.28
Clip1-204ENSMUST00000111564 AI854703Q8BIN3 203 aa7.03□□□□□ -1.28
Clip1-204ENSMUST00000111564 AtrQ9JKK8 2635 aa7.03□□□□□ -1.28
Clip1-204ENSMUST00000111564 Coa5Q99M07 74 aa7.02□□□□□ -1.29
Clip1-204ENSMUST00000111564 CnbpP53996 178 aaKnown RBP7.02□□□□□ -1.29
Clip1-204ENSMUST00000111564 Col7a1Q63870 2944 aa7.01□□□□□ -1.29
Clip1-204ENSMUST00000111564 Chd6A3KFM7 2711 aa7□□□□□ -1.29
Clip1-204ENSMUST00000111564 Spink7Q6IE32 76 aa7□□□□□ -1.29
Clip1-204ENSMUST00000111564 Lypd5Q9D7Z7 256 aa7□□□□□ -1.29
Clip1-204ENSMUST00000111564 Tenm3Q9WTS6 2715 aa7□□□□□ -1.29
Clip1-204ENSMUST00000111564 Akap13E9Q394 2776 aa7□□□□□ -1.29
Clip1-204ENSMUST00000111564 LystP97412 3788 aa6.99□□□□□ -1.29
Clip1-204ENSMUST00000111564 Gm7276Q3TYW4 209 aa6.98□□□□□ -1.29
Clip1-204ENSMUST00000111564 Uqcr11Q9CPX8 56 aa6.98□□□□□ -1.29
Clip1-204ENSMUST00000111564 Pdzd2E9Q1M1 2796 aa6.98□□□□□ -1.29
Clip1-204ENSMUST00000111564 Chd9Q8BYH8 2885 aa6.97□□□□□ -1.29
Clip1-204ENSMUST00000111564 Csmd2V9GX34 3611 aa6.96□□□□□ -1.3
Clip1-204ENSMUST00000111564 Zcchc13Q9D548 170 aa6.96□□□□□ -1.3
Clip1-204ENSMUST00000111564 NipblQ6KCD5 2798 aaKnown RBP6.95□□□□□ -1.3
Clip1-204ENSMUST00000111564 CriptO70333 101 aa6.95□□□□□ -1.3
Clip1-204ENSMUST00000111564 Fam104aA2A6P4 185 aa6.93□□□□□ -1.3
Clip1-204ENSMUST00000111564 Rps28P62858 69 aaKnown RBP6.93□□□□□ -1.3
Clip1-204ENSMUST00000111564 9530053A07RikE9PVG8 2581 aa6.93□□□□□ -1.3
Clip1-204ENSMUST00000111564 NbdyA0A0N4SUI7 68 aa6.92□□□□□ -1.3
Clip1-204ENSMUST00000111564 Nsd1O88491 2588 aaKnown RBP6.91□□□□□ -1.3
Clip1-204ENSMUST00000111564 Cypt14J3QPF7 87 aa6.91□□□□□ -1.3
Clip1-204ENSMUST00000111564 Phxr4P15974 95 aa6.91□□□□□ -1.3
Clip1-204ENSMUST00000111564 C530025M09RikF6RGA8 229 aa6.9□□□□□ -1.3
Clip1-204ENSMUST00000111564 Muc4Q8JZM8 3443 aa6.9□□□□□ -1.31
Clip1-204ENSMUST00000111564 Gm7138L7N2C3 230 aa6.89□□□□□ -1.31
Clip1-204ENSMUST00000111564 Gm3238W4VSP7 230 aa6.89□□□□□ -1.31
Clip1-204ENSMUST00000111564 Stab1Q8R4Y4 2571 aa6.89□□□□□ -1.31
Clip1-204ENSMUST00000111564 2310034C09RikQ9D746 214 aa6.89□□□□□ -1.31
Clip1-204ENSMUST00000111564 Helz2E9QAM5 2947 aaKnown RBP6.88□□□□□ -1.31
Clip1-204ENSMUST00000111564 Fam229aB2KGE5 128 aa6.88□□□□□ -1.31
Clip1-204ENSMUST00000111564 Gm21798J3QNU5 87 aa6.88□□□□□ -1.31
Clip1-204ENSMUST00000111564 Ank2Q8C8R3 3898 aa6.88□□□□□ -1.31
Clip1-204ENSMUST00000111564 Gm10065F6TJM2 114 aa6.87□□□□□ -1.31
Clip1-204ENSMUST00000111564 Itpr2Q9Z329 2701 aa6.87□□□□□ -1.31
Clip1-204ENSMUST00000111564 Igfn1Q3KNY0 2849 aa6.87□□□□□ -1.31
Clip1-204ENSMUST00000111564 Dmbt1Q60997 2085 aa6.86□□□□□ -1.31
Clip1-204ENSMUST00000111564 Hivep1Q03172 2688 aa6.86□□□□□ -1.31
Clip1-204ENSMUST00000111564 Chtf8P0CG14 533 aa6.85□□□□□ -1.31
Clip1-204ENSMUST00000111564 Gm7137J3QMW1 236 aa6.84□□□□□ -1.31
Clip1-204ENSMUST00000111564 Tenm4Q3UHK6 2771 aa6.84□□□□□ -1.31
Clip1-204ENSMUST00000111564 Gm9955Q8CEJ8 102 aa6.83□□□□□ -1.32
Clip1-204ENSMUST00000111564 Eif4ebp3Q80VV3 101 aa6.82□□□□□ -1.32
Clip1-204ENSMUST00000111564 Krtap15-1Q9QZU5 150 aa6.82□□□□□ -1.32
Clip1-204ENSMUST00000111564 Fn1P11276 2477 aaKnown RBP6.82□□□□□ -1.32
Clip1-204ENSMUST00000111564 Sec61bQ9CQS8 96 aaKnown RBP6.79□□□□□ -1.32
Clip1-204ENSMUST00000111564 Gm4491E0CX42 125 aa6.79□□□□□ -1.32
Clip1-204ENSMUST00000111564 Gm10320E9PW43 113 aa6.78□□□□□ -1.32
Clip1-204ENSMUST00000111564 Col6a5A6H584 2640 aa6.78□□□□□ -1.32
Clip1-204ENSMUST00000111564 Tex15F8VPN2 2785 aa6.75□□□□□ -1.33
Clip1-204ENSMUST00000111564 Camk2n1Q6QWF9 78 aa6.75□□□□□ -1.33
Clip1-204ENSMUST00000111564 Gm10643Q3URG9 111 aa6.74□□□□□ -1.33
Clip1-204ENSMUST00000111564 Fbn1Q61554 2873 aaKnown RBP6.74□□□□□ -1.33
Clip1-204ENSMUST00000111564 Gm17349F7BGH6 99 aa6.73□□□□□ -1.33
Clip1-204ENSMUST00000111564 Gm36176A0A1W2P8D5 158 aa6.72□□□□□ -1.33
Clip1-204ENSMUST00000111564 BsnO88737 3942 aa6.72□□□□□ -1.33
Clip1-204ENSMUST00000111564 Igsf10Q3V1M1 2594 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms