RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Igkv3-10A0A0G2JGN0 119 aa5.43□□□□□ -1.54
Bdnf-202ENSMUST00000111042 P01821 116 aa5.43□□□□□ -1.54
Bdnf-202ENSMUST00000111042 P84750 121 aa5.43□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Gm44790A0A0N4SV91 103 aa5.43□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Mrpl34Q99N91 92 aa5.43□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Gm7276Q3TYW4 209 aa5.42□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Phf5aP83870 110 aaKnown RBP5.42□□□□□ -1.54
Bdnf-202ENSMUST00000111042 C130032M10RikQ8C888 123 aa5.42□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Ly6g6cQ9Z1Q4 126 aa5.42□□□□□ -1.54
Bdnf-202ENSMUST00000111042 A330070K13RikQ8CA53 115 aa5.41□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Gm28230A0A0A0MQ91 144 aa5.41□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Igkv1-110A0A0B4J1I0 119 aa5.4□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Vpreb1P13372 142 aa5.4□□□□□ -1.54
Bdnf-202ENSMUST00000111042 UqcrqQ9CQ69 82 aa5.4□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Znf414Q9DCK4 299 aa5.4□□□□□ -1.54
Bdnf-202ENSMUST00000111042 Igkv3-4A0A140T8Q4 119 aa5.4□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Fbn1Q61554 2873 aaKnown RBP5.4□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Col7a1Q63870 2944 aa5.4□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Tenm1Q9WTS4 2731 aa5.4□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Q8K1L6 76 aa5.4□□□□□ -1.55
Bdnf-202ENSMUST00000111042 1600014C23RikQ9DAX4 101 aa5.4□□□□□ -1.55
Bdnf-202ENSMUST00000111042 SnurfQ9WU12 71 aa5.4□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Gm19935A0A1B0GSF9 52 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Gm21886J3QJU9 214 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Reg3aO09037 175 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 A930002H24RikQ8C8Y3 163 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Igkv3-7A0A0G2JE31 119 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Vpreb2P13373 142 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 2310050C09RikG5E8Z3 280 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Fam229bQ8CF36 80 aa5.39□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Adm2Q7TNK8 150 aa5.38□□□□□ -1.55
Bdnf-202ENSMUST00000111042 A0A286YE49 62 aa5.38□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Cystm1Q8K353 104 aa5.38□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Ank2Q8C8R3 3898 aa5.38□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Gm10642Q3TWM1 71 aa5.37□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Gm9508A0A1W2P7W0 230 aa5.37□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Q8BT88 171 aa5.36□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Lce1mQ9CR91 182 aa5.36□□□□□ -1.55
Bdnf-202ENSMUST00000111042 9230102O04RikA2ASX7 82 aa5.35□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Atox1O08997 68 aaKnown RBP5.35□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Mrpl55Q9CZ83 127 aa5.35□□□□□ -1.55
Bdnf-202ENSMUST00000111042 AW011738F6S7Q2 159 aa5.35□□□□□ -1.55
Bdnf-202ENSMUST00000111042 LystP97412 3788 aa5.35□□□□□ -1.55
Bdnf-202ENSMUST00000111042 1700074P13RikQ9D9G7 251 aa5.34□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Igkv8-19A0A0G2JFN8 121 aa5.34□□□□□ -1.55
Bdnf-202ENSMUST00000111042 Plac8Q9JI48 112 aa5.34□□□□□ -1.55
Bdnf-202ENSMUST00000111042 A730071L15RikQ8C4X0 137 aa5.34□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Sprr1aQ62266 144 aa5.33□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Ccdc179J3QM76 67 aa5.33□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Gm10267M0QWD8 85 aa5.33□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Chchd10Q7TNL9 138 aa5.33□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Gm10570F6VB42 170 aa5.32□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Gm5617Q91VN2 117 aa5.32□□□□□ -1.56
Bdnf-202ENSMUST00000111042 TgO08710 2766 aa5.32□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Defb11Q8R2I7 77 aa5.32□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Fam104aA2A6P4 185 aa5.31□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Defb9Q8R2I6 67 aa5.31□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Znf706Q9D115 76 aaKnown RBP5.31□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Gm11939A2A592 99 aa5.31□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Gm17349F7BGH6 99 aa5.31□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Rpl37aP61514 92 aa5.31□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Coa6Q8BGD8 79 aa5.31□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Defb38Q7TNV7 63 aa5.3□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Defb13Q8R2I4 64 aa5.3□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Serp1Q9Z1W5 66 aa5.3□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Zcchc13Q9D548 170 aa5.3□□□□□ -1.56
Bdnf-202ENSMUST00000111042 AI606181Q8C7B9 129 aa5.29□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Gm27235Q3UW50 83 aa5.28□□□□□ -1.56
Bdnf-202ENSMUST00000111042 Rps28P62858 69 aaKnown RBP5.27□□□□□ -1.57
Bdnf-202ENSMUST00000111042 Igkv3-3A0A140T8Q0 119 aa5.27□□□□□ -1.57
Bdnf-202ENSMUST00000111042 Defb39Q70KL3 74 aa5.25□□□□□ -1.57
Bdnf-202ENSMUST00000111042 Wfdc3Q14AE4 130 aa5.24□□□□□ -1.57
Bdnf-202ENSMUST00000111042 Anapc11Q9CPX9 84 aa5.23□□□□□ -1.57
Bdnf-202ENSMUST00000111042 2310061N02RikQ9D6S9 174 aa5.23□□□□□ -1.57
Bdnf-202ENSMUST00000111042 Xirp2Q4U4S6 3784 aa5.22□□□□□ -1.57
Bdnf-202ENSMUST00000111042 Gm10197F6QEY5 67 aa5.21□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Gm28374F6SG70 93 aa5.21□□□□□ -1.58
Bdnf-202ENSMUST00000111042 A530084C06RikQ3UTW2 186 aa5.21□□□□□ -1.58
Bdnf-202ENSMUST00000111042 VwfQ8CIZ8 2813 aa5.21□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Gm10139O88245 57 aa5.2□□□□□ -1.58
Bdnf-202ENSMUST00000111042 BsnO88737 3942 aa5.2□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Gm9507D3Z5T3 223 aa5.19□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Gm10065F6TJM2 114 aa5.18□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Sox16Q62247 57 aa5.18□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Krtap3-2Q9D638 99 aa5.18□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Krtap3-3Q9D7P0 99 aa5.18□□□□□ -1.58
Bdnf-202ENSMUST00000111042 6030445D17RikE9Q8F9 148 aa5.18□□□□□ -1.58
Bdnf-202ENSMUST00000111042 CubnQ9JLB4 3623 aa5.18□□□□□ -1.58
Bdnf-202ENSMUST00000111042 FcgbpE9Q0B5 2583 aa5.18□□□□□ -1.58
Bdnf-202ENSMUST00000111042 A030005L19RikA0A1Y7VIU2 113 aa5.17□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Spaca4Q80ZQ0 127 aa5.17□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Spint4Q9D263 159 aa5.16□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Gm10160F6Y577 67 aa5.16□□□□□ -1.58
Bdnf-202ENSMUST00000111042 SmcpP15265 143 aa5.16□□□□□ -1.58
Bdnf-202ENSMUST00000111042 Coa5Q99M07 74 aa5.16□□□□□ -1.58
Bdnf-202ENSMUST00000111042 H2al1bA0A087WP11 105 aa5.15□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Gpr15lA0A0B4J1N3 78 aa5.15□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Gm10337F7DEP7 55 aa5.15□□□□□ -1.59
Bdnf-202ENSMUST00000111042 Odf3bQ5M8M2 238 aa5.15□□□□□ -1.59
Bdnf-202ENSMUST00000111042 NbdyA0A0N4SUI7 68 aa5.14□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms