RNA–Protein interactions for RNA: ENSMUST00000102838.9

Sptbn1-203, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptbn1, Length 9,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-203ENSMUST00000102838 Nbeal2Q6ZQA0 2742 aa5.72□□□□□ -1.49
Sptbn1-203ENSMUST00000102838 Itpr2Q9Z329 2701 aa5.69□□□□□ -1.5
Sptbn1-203ENSMUST00000102838 Stab2Q8R4U0 2559 aa5.69□□□□□ -1.5
Sptbn1-203ENSMUST00000102838 Myo15bI7HPW8 3033 aa5.67□□□□□ -1.5
Sptbn1-203ENSMUST00000102838 Muc2Q80Z19 2680 aa5.66□□□□□ -1.5
Sptbn1-203ENSMUST00000102838 Gm5767A0A0J9YTU8 78 aa5.64□□□□□ -1.51
Sptbn1-203ENSMUST00000102838 BC029722A0A0N4SW31 51 aa5.62□□□□□ -1.51
Sptbn1-203ENSMUST00000102838 Odf3bQ5M8M2 238 aa5.61□□□□□ -1.51
Sptbn1-203ENSMUST00000102838 6030445D17RikE9Q8F9 148 aa5.6□□□□□ -1.51
Sptbn1-203ENSMUST00000102838 CenpfE9Q3P4 2997 aaKnown RBP5.59□□□□□ -1.51
Sptbn1-203ENSMUST00000102838 C530025M09RikF6RGA8 229 aa5.58□□□□□ -1.52
Sptbn1-203ENSMUST00000102838 Gm11565A2A4M7 156 aa5.56□□□□□ -1.52
Sptbn1-203ENSMUST00000102838 Pkd1l1Q8R526 2615 aa5.54□□□□□ -1.52
Sptbn1-203ENSMUST00000102838 FlncQ8VHX6 2726 aaKnown RBP5.53□□□□□ -1.52
Sptbn1-203ENSMUST00000102838 Golgb1E9PVZ8 3238 aa5.52□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Romo1P60603 79 aa5.51□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Hivep1Q03172 2688 aa5.5□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Utp20Q5XG71 2788 aaKnown RBP5.5□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Gm10382Q3V0T5 144 aa5.5□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Rpl37Q9D823 97 aa5.48□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Jbts17Q8CE72 3214 aa5.48□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Gm3646F6S692 53 aa5.48□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Fam229bQ8CF36 80 aa5.47□□□□□ -1.53
Sptbn1-203ENSMUST00000102838 Gm3233E9Q2H5 230 aa5.46□□□□□ -1.54
Sptbn1-203ENSMUST00000102838 Smim29Q8R043 75 aa5.46□□□□□ -1.54
Sptbn1-203ENSMUST00000102838 Ep400Q8CHI8 3072 aaKnown RBP5.44□□□□□ -1.54
Sptbn1-203ENSMUST00000102838 Gm17349F7BGH6 99 aa5.43□□□□□ -1.54
Sptbn1-203ENSMUST00000102838 1700042G07RikB1AUF7 90 aa5.43□□□□□ -1.54
Sptbn1-203ENSMUST00000102838 Chd7A2AJK6 2986 aaKnown RBP5.42□□□□□ -1.54
Sptbn1-203ENSMUST00000102838 Ubr5Q80TP3 2792 aa5.4□□□□□ -1.54
Sptbn1-203ENSMUST00000102838 Ndufaf8A2AMZ4 74 aa5.4□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 FcgbpE9Q0B5 2583 aa5.38□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Gm7138L7N2C3 230 aa5.38□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Gm3238W4VSP7 230 aa5.38□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Dnah12Q3V0Q1 3086 aa5.37□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Gm37013Q8K491 104 aa5.36□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Gm7137J3QMW1 236 aa5.35□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Gm16253D3Z167 63 aa5.34□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Gm10139O88245 57 aa5.34□□□□□ -1.55
Sptbn1-203ENSMUST00000102838 Fbn2Q61555 2907 aa5.34□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 Gm42715A0A087WP63 3095 aaKnown RBP5.34□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 KalrnA2CG49 2964 aa5.33□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 Krtap29-1A2A5X4 342 aa5.32□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 Ash1lQ99MY8 2958 aa5.32□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 2310050C09RikG5E8Z3 280 aa5.3□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 Gm9112A2AI92 75 aa5.3□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 Tex15F8VPN2 2785 aa5.29□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 ApcQ61315 2845 aa5.29□□□□□ -1.56
Sptbn1-203ENSMUST00000102838 Rps29P62274 56 aa5.27□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 4933415A04RikQ9D443 101 aa5.25□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 DspE9Q557 2883 aaKnown RBP5.25□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Gm2310J3QNJ2 377 aa5.25□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Tnp2P11378 117 aa5.24□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Sprr1aQ62266 144 aa5.24□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Tnp1P10856 55 aa5.23□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Cox6b2Q80ZN9 88 aa5.22□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 MgaA2AWL7 3003 aaKnown RBP5.22□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Bod1lE9Q6J5 3032 aa5.22□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Igfn1Q3KNY0 2849 aa5.21□□□□□ -1.57
Sptbn1-203ENSMUST00000102838 Gm21887J3QQ04 176 aa5.21□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Gm9508A0A1W2P7W0 230 aa5.19□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 FrylF8VQ05 3007 aa5.19□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Dmxl1Q6PNC0 3013 aa5.18□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Krtap13O88375 197 aa5.18□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Nf1Q04690 2841 aa5.17□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Cystm1Q8K353 104 aa5.16□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Cep350E9Q309 3095 aa5.16□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 SrcapA0A087WQ44 3271 aa5.16□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Gm36176A0A1W2P8D5 158 aa5.16□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 BptfA2A654 3036 aaKnown RBP5.15□□□□□ -1.58
Sptbn1-203ENSMUST00000102838 Prune2Q52KR3 3084 aa5.15□□□□□ -1.59
Sptbn1-203ENSMUST00000102838 Pdzd2E9Q1M1 2796 aa5.13□□□□□ -1.59
Sptbn1-203ENSMUST00000102838 NbeaQ9EPN1 2936 aa5.11□□□□□ -1.59
Sptbn1-203ENSMUST00000102838 Usp34Q6ZQ93 3582 aa5.1□□□□□ -1.59
Sptbn1-203ENSMUST00000102838 Lama2Q60675 3118 aaKnown RBP5.09□□□□□ -1.59
Sptbn1-203ENSMUST00000102838 Zzef1Q5SSH7 2924 aa5.09□□□□□ -1.59
Sptbn1-203ENSMUST00000102838 Srrm2Q8BTI8 2703 aaKnown RBP5.08□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 Gm40193A0A1B0GT39 78 aa5.08□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 Tenm1Q9WTS4 2731 aa5.08□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 Megf8P60882 2789 aa5.05□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 A930033H14RikG5E8X6 103 aa5.04□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 Chd9Q8BYH8 2885 aa5.03□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 TgO08710 2766 aa5.03□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 UtrnE9Q6R7 3430 aa5.03□□□□□ -1.6
Sptbn1-203ENSMUST00000102838 Lelp1Q9DAE3 120 aa5.01□□□□□ -1.61
Sptbn1-203ENSMUST00000102838 A730071L15RikQ8C4X0 137 aa5.01□□□□□ -1.61
Sptbn1-203ENSMUST00000102838 Krtap14O08640 167 aa5□□□□□ -1.61
Sptbn1-203ENSMUST00000102838 D6Ertd527eA0A0N4SWI3 464 aa5□□□□□ -1.61
Sptbn1-203ENSMUST00000102838 Gm9507D3Z5T3 223 aa4.99□□□□□ -1.61
Sptbn1-203ENSMUST00000102838 Ranbp2Q9ERU9 3053 aaKnown RBP4.98□□□□□ -1.61
Sptbn1-203ENSMUST00000102838 2310057N15RikQ9D6T8 200 aa4.96□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 Tenm3Q9WTS6 2715 aa4.94□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 Lama1P19137 3084 aa4.94□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 Mki67E9PVX6 3177 aaKnown RBP4.93□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 SmcpP15265 143 aa4.93□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 Rev3lQ61493 3122 aa4.93□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 Trank1Q8BV79 2999 aa4.91□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 Krtap10-4Q08EG8 221 aa4.9□□□□□ -1.62
Sptbn1-203ENSMUST00000102838 LrbaQ9ESE1 2856 aa4.89□□□□□ -1.63
Sptbn1-203ENSMUST00000102838 4933428G20RikQ9D3X4 101 aa4.88□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 135 ms