RNA–Protein interactions for RNA: ENSMUST00000100064.8

Scn9a-202, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Scn9a, Length 9,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-202ENSMUST00000100064 6030445D17RikE9Q8F9 148 aa6.52□□□□□ -1.37
Scn9a-202ENSMUST00000100064 Gm7138L7N2C3 230 aa6.51□□□□□ -1.37
Scn9a-202ENSMUST00000100064 Gm3238W4VSP7 230 aa6.51□□□□□ -1.37
Scn9a-202ENSMUST00000100064 Gm19426M0QWC7 77 aa6.49□□□□□ -1.37
Scn9a-202ENSMUST00000100064 Gm7137J3QMW1 236 aa6.49□□□□□ -1.37
Scn9a-202ENSMUST00000100064 Odf3bQ5M8M2 238 aa6.48□□□□□ -1.37
Scn9a-202ENSMUST00000100064 Ubr5Q80TP3 2792 aa6.47□□□□□ -1.37
Scn9a-202ENSMUST00000100064 Gm5767A0A0J9YTU8 78 aa6.47□□□□□ -1.37
Scn9a-202ENSMUST00000100064 NipblQ6KCD5 2798 aaKnown RBP6.46□□□□□ -1.38
Scn9a-202ENSMUST00000100064 Eif4ebp3Q80VV3 101 aa6.46□□□□□ -1.38
Scn9a-202ENSMUST00000100064 Gm17349F7BGH6 99 aa6.44□□□□□ -1.38
Scn9a-202ENSMUST00000100064 BC029722A0A0N4SW31 51 aa6.36□□□□□ -1.39
Scn9a-202ENSMUST00000100064 Itpr2Q9Z329 2701 aa6.35□□□□□ -1.39
Scn9a-202ENSMUST00000100064 Smim29Q8R043 75 aa6.34□□□□□ -1.39
Scn9a-202ENSMUST00000100064 Gm11565A2A4M7 156 aa6.32□□□□□ -1.4
Scn9a-202ENSMUST00000100064 Gm10139O88245 57 aa6.32□□□□□ -1.4
Scn9a-202ENSMUST00000100064 Prr13Q9CQJ5 137 aa6.3□□□□□ -1.4
Scn9a-202ENSMUST00000100064 SrcapA0A087WQ44 3271 aa6.27□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Gm36176A0A1W2P8D5 158 aa6.27□□□□□ -1.41
Scn9a-202ENSMUST00000100064 CenpfE9Q3P4 2997 aaKnown RBP6.26□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Krtap29-1A2A5X4 342 aa6.26□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Fam229bQ8CF36 80 aa6.25□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Gm16253D3Z167 63 aa6.25□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Gm9508A0A1W2P7W0 230 aa6.25□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Hivep1Q03172 2688 aa6.25□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Rpl37Q9D823 97 aa6.24□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Sprr1aQ62266 144 aa6.24□□□□□ -1.41
Scn9a-202ENSMUST00000100064 FcgbpE9Q0B5 2583 aa6.23□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Gm42715A0A087WP63 3095 aaKnown RBP6.22□□□□□ -1.41
Scn9a-202ENSMUST00000100064 Muc2Q80Z19 2680 aa6.2□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Lelp1Q9DAE3 120 aa6.2□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Romo1P60603 79 aa6.2□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Ash1lQ99MY8 2958 aa6.19□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Prune2Q52KR3 3084 aa6.19□□□□□ -1.42
Scn9a-202ENSMUST00000100064 FlncQ8VHX6 2726 aaKnown RBP6.19□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Ep400Q8CHI8 3072 aaKnown RBP6.19□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Gm37013Q8K491 104 aa6.18□□□□□ -1.42
Scn9a-202ENSMUST00000100064 MgaA2AWL7 3003 aaKnown RBP6.17□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Igfn1Q3KNY0 2849 aa6.17□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Jbts17Q8CE72 3214 aa6.16□□□□□ -1.42
Scn9a-202ENSMUST00000100064 Krtap13O88375 197 aa6.13□□□□□ -1.43
Scn9a-202ENSMUST00000100064 Myo15bI7HPW8 3033 aa6.12□□□□□ -1.43
Scn9a-202ENSMUST00000100064 2310050C09RikG5E8Z3 280 aa6.12□□□□□ -1.43
Scn9a-202ENSMUST00000100064 Gm10382Q3V0T5 144 aa6.11□□□□□ -1.43
Scn9a-202ENSMUST00000100064 Tex15F8VPN2 2785 aa6.1□□□□□ -1.43
Scn9a-202ENSMUST00000100064 Tnp2P11378 117 aa6.09□□□□□ -1.44
Scn9a-202ENSMUST00000100064 Rps29P62274 56 aa6.08□□□□□ -1.44
Scn9a-202ENSMUST00000100064 Bod1lE9Q6J5 3032 aa6.06□□□□□ -1.44
Scn9a-202ENSMUST00000100064 Dnah12Q3V0Q1 3086 aa6.06□□□□□ -1.44
Scn9a-202ENSMUST00000100064 Utp20Q5XG71 2788 aaKnown RBP6.06□□□□□ -1.44
Scn9a-202ENSMUST00000100064 Gm9507D3Z5T3 223 aa6.03□□□□□ -1.44
Scn9a-202ENSMUST00000100064 Gm2310J3QNJ2 377 aa6.01□□□□□ -1.45
Scn9a-202ENSMUST00000100064 Fbn2Q61555 2907 aa6.01□□□□□ -1.45
Scn9a-202ENSMUST00000100064 Srrm2Q8BTI8 2703 aaKnown RBP5.99□□□□□ -1.45
Scn9a-202ENSMUST00000100064 ApcQ61315 2845 aa5.97□□□□□ -1.45
Scn9a-202ENSMUST00000100064 Golgb1E9PVZ8 3238 aa5.96□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Krtap14O08640 167 aa5.95□□□□□ -1.46
Scn9a-202ENSMUST00000100064 KalrnA2CG49 2964 aa5.95□□□□□ -1.46
Scn9a-202ENSMUST00000100064 UtrnE9Q6R7 3430 aa5.95□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Gm3646F6S692 53 aa5.94□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Cox6b2Q80ZN9 88 aa5.94□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Tnrc18Q80WC3 2878 aa5.93□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Krtap10-4Q08EG8 221 aa5.92□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Gm21887J3QQ04 176 aa5.92□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Dmxl1Q6PNC0 3013 aa5.91□□□□□ -1.46
Scn9a-202ENSMUST00000100064 Cep350E9Q309 3095 aa5.89□□□□□ -1.47
Scn9a-202ENSMUST00000100064 Tenm1Q9WTS4 2731 aa5.88□□□□□ -1.47
Scn9a-202ENSMUST00000100064 Krtap10-10A0A1W2P7T6 217 aa5.88□□□□□ -1.47
Scn9a-202ENSMUST00000100064 Rev3lQ61493 3122 aa5.88□□□□□ -1.47
Scn9a-202ENSMUST00000100064 A730071L15RikQ8C4X0 137 aa5.87□□□□□ -1.47
Scn9a-202ENSMUST00000100064 Tnp1P10856 55 aa5.84□□□□□ -1.48
Scn9a-202ENSMUST00000100064 Nf1Q04690 2841 aa5.83□□□□□ -1.48
Scn9a-202ENSMUST00000100064 Tenm4Q3UHK6 2771 aa5.83□□□□□ -1.48
Scn9a-202ENSMUST00000100064 2310061N02RikQ9D6S9 174 aa5.82□□□□□ -1.48
Scn9a-202ENSMUST00000100064 Pdzd2E9Q1M1 2796 aa5.82□□□□□ -1.48
Scn9a-202ENSMUST00000100064 TgO08710 2766 aa5.81□□□□□ -1.48
Scn9a-202ENSMUST00000100064 D6Ertd527eA0A0N4SWI3 464 aa5.81□□□□□ -1.48
Scn9a-202ENSMUST00000100064 Cystm1Q8K353 104 aa5.81□□□□□ -1.48
Scn9a-202ENSMUST00000100064 2310057N15RikQ9D6T8 200 aa5.78□□□□□ -1.48
Scn9a-202ENSMUST00000100064 Megf8P60882 2789 aa5.78□□□□□ -1.48
Scn9a-202ENSMUST00000100064 A930033H14RikG5E8X6 103 aa5.77□□□□□ -1.49
Scn9a-202ENSMUST00000100064 Chd9Q8BYH8 2885 aa5.76□□□□□ -1.49
Scn9a-202ENSMUST00000100064 Zzef1Q5SSH7 2924 aa5.74□□□□□ -1.49
Scn9a-202ENSMUST00000100064 Gm7173A0A0G2JEB6 3132 aa5.74□□□□□ -1.49
Scn9a-202ENSMUST00000100064 Gm2696A0A1W2P709 240 aa5.74□□□□□ -1.49
Scn9a-202ENSMUST00000100064 Chd7A2AJK6 2986 aaKnown RBP5.72□□□□□ -1.49
Scn9a-202ENSMUST00000100064 DspE9Q557 2883 aaKnown RBP5.72□□□□□ -1.49
Scn9a-202ENSMUST00000100064 Lama2Q60675 3118 aaKnown RBP5.72□□□□□ -1.49
Scn9a-202ENSMUST00000100064 Gm5965D3Z724 196 aa5.71□□□□□ -1.49
Scn9a-202ENSMUST00000100064 TrioQ0KL02 3102 aa5.71□□□□□ -1.5
Scn9a-202ENSMUST00000100064 FryE9Q8I9 3020 aa5.68□□□□□ -1.5
Scn9a-202ENSMUST00000100064 Gm40193A0A1B0GT39 78 aa5.63□□□□□ -1.51
Scn9a-202ENSMUST00000100064 1700042G07RikB1AUF7 90 aa5.62□□□□□ -1.51
Scn9a-202ENSMUST00000100064 Tenm3Q9WTS6 2715 aa5.62□□□□□ -1.51
Scn9a-202ENSMUST00000100064 HttP42859 3119 aa5.61□□□□□ -1.51
Scn9a-202ENSMUST00000100064 FrylF8VQ05 3007 aa5.61□□□□□ -1.51
Scn9a-202ENSMUST00000100064 Wdfy4E9Q2M9 3149 aa5.6□□□□□ -1.51
Scn9a-202ENSMUST00000100064 4933415A04RikQ9D443 101 aa5.6□□□□□ -1.51
Scn9a-202ENSMUST00000100064 NbeaQ9EPN1 2936 aa5.6□□□□□ -1.51
Scn9a-202ENSMUST00000100064 Trank1Q8BV79 2999 aa5.6□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms