RNA–Protein interactions for RNA: ENSMUST00000087258.9

Tro-202, Transcript of Tro protein, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Tro, Length 6,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-202ENSMUST00000087258 Gm21887J3QQ04 176 aa6.35□□□□□ -1.39
Tro-202ENSMUST00000087258 HrnrQ8VHD8 2496 aa6.33□□□□□ -1.4
Tro-202ENSMUST00000087258 2310057N15RikQ9D6T8 200 aa6.33□□□□□ -1.4
Tro-202ENSMUST00000087258 Ndufaf8A2AMZ4 74 aa6.32□□□□□ -1.4
Tro-202ENSMUST00000087258 Usp24B1AY13 2617 aaKnown RBP6.31□□□□□ -1.4
Tro-202ENSMUST00000087258 Tnp2P11378 117 aa6.3□□□□□ -1.4
Tro-202ENSMUST00000087258 Krtap14O08640 167 aa6.27□□□□□ -1.41
Tro-202ENSMUST00000087258 Jbts17Q8CE72 3214 aa6.27□□□□□ -1.41
Tro-202ENSMUST00000087258 Gm2696A0A1W2P709 240 aa6.26□□□□□ -1.41
Tro-202ENSMUST00000087258 Unc79Q0KK59 2596 aa6.24□□□□□ -1.41
Tro-202ENSMUST00000087258 Abca12E9Q876 2595 aa6.23□□□□□ -1.41
Tro-202ENSMUST00000087258 1700042G07RikB1AUF7 90 aa6.21□□□□□ -1.42
Tro-202ENSMUST00000087258 4933415A04RikQ9D443 101 aa6.21□□□□□ -1.42
Tro-202ENSMUST00000087258 Gm2310J3QNJ2 377 aa6.19□□□□□ -1.42
Tro-202ENSMUST00000087258 Gm5965D3Z724 196 aa6.19□□□□□ -1.42
Tro-202ENSMUST00000087258 FasnP19096 2504 aaKnown RBP6.18□□□□□ -1.42
Tro-202ENSMUST00000087258 Cox6b2Q80ZN9 88 aa6.17□□□□□ -1.42
Tro-202ENSMUST00000087258 Tnp1P10856 55 aa6.17□□□□□ -1.42
Tro-202ENSMUST00000087258 Ankrd11E9Q4F7 2643 aa6.16□□□□□ -1.42
Tro-202ENSMUST00000087258 Gm9112A2AI92 75 aa6.15□□□□□ -1.42
Tro-202ENSMUST00000087258 Golgb1E9PVZ8 3238 aa6.14□□□□□ -1.43
Tro-202ENSMUST00000087258 AtrQ9JKK8 2635 aa6.12□□□□□ -1.43
Tro-202ENSMUST00000087258 UtrnE9Q6R7 3430 aa6.11□□□□□ -1.43
Tro-202ENSMUST00000087258 Fn1P11276 2477 aaKnown RBP6.11□□□□□ -1.43
Tro-202ENSMUST00000087258 Zfp292Q9Z2U2 2698 aa6.11□□□□□ -1.43
Tro-202ENSMUST00000087258 Gm11565A2A4M7 156 aa6.11□□□□□ -1.43
Tro-202ENSMUST00000087258 Bod1lE9Q6J5 3032 aa6.08□□□□□ -1.44
Tro-202ENSMUST00000087258 Gm9195A0A140LHT4 2805 aa6.07□□□□□ -1.44
Tro-202ENSMUST00000087258 Rps29P62274 56 aa6.04□□□□□ -1.44
Tro-202ENSMUST00000087258 D6Ertd527eA0A0N4SWI3 464 aa6.04□□□□□ -1.44
Tro-202ENSMUST00000087258 2310061N02RikQ9D6S9 174 aa6.03□□□□□ -1.44
Tro-202ENSMUST00000087258 Gm9918Q8BUR5 174 aa6.02□□□□□ -1.45
Tro-202ENSMUST00000087258 FlnaQ8BTM8 2647 aaKnown RBP6.01□□□□□ -1.45
Tro-202ENSMUST00000087258 CenpfE9Q3P4 2997 aaKnown RBP6□□□□□ -1.45
Tro-202ENSMUST00000087258 Prune2Q52KR3 3084 aa5.96□□□□□ -1.45
Tro-202ENSMUST00000087258 Myo18bE9PV66 2605 aa5.93□□□□□ -1.46
Tro-202ENSMUST00000087258 Gm42715A0A087WP63 3095 aaKnown RBP5.92□□□□□ -1.46
Tro-202ENSMUST00000087258 Dnah12Q3V0Q1 3086 aa5.91□□□□□ -1.46
Tro-202ENSMUST00000087258 FlnbQ80X90 2602 aaKnown RBP5.9□□□□□ -1.46
Tro-202ENSMUST00000087258 Gcn1E9PVA8 2671 aaKnown RBP5.89□□□□□ -1.47
Tro-202ENSMUST00000087258 Stab1Q8R4Y4 2571 aa5.87□□□□□ -1.47
Tro-202ENSMUST00000087258 A930033H14RikG5E8X6 103 aa5.86□□□□□ -1.47
Tro-202ENSMUST00000087258 Notch1Q01705 2531 aa5.86□□□□□ -1.47
Tro-202ENSMUST00000087258 Map1aQ9QYR6 2776 aa5.84□□□□□ -1.47
Tro-202ENSMUST00000087258 Ep400Q8CHI8 3072 aaKnown RBP5.82□□□□□ -1.48
Tro-202ENSMUST00000087258 Prm2P07978 107 aa5.82□□□□□ -1.48
Tro-202ENSMUST00000087258 Zfhx3Q61329 3726 aa5.81□□□□□ -1.48
Tro-202ENSMUST00000087258 Lama3Q61789 3330 aa5.81□□□□□ -1.48
Tro-202ENSMUST00000087258 Gm40193A0A1B0GT39 78 aa5.8□□□□□ -1.48
Tro-202ENSMUST00000087258 Hectd1Q69ZR2 2618 aaKnown RBP5.8□□□□□ -1.48
Tro-202ENSMUST00000087258 Akap13E9Q394 2776 aa5.79□□□□□ -1.48
Tro-202ENSMUST00000087258 NipblQ6KCD5 2798 aaKnown RBP5.79□□□□□ -1.48
Tro-202ENSMUST00000087258 Gm20537G3UYK7 97 aa5.76□□□□□ -1.49
Tro-202ENSMUST00000087258 PcntP48725 2898 aa5.75□□□□□ -1.49
Tro-202ENSMUST00000087258 B930094E09RikQ8C4T2 136 aa5.75□□□□□ -1.49
Tro-202ENSMUST00000087258 Prrc2cQ3TLH4 2846 aaKnown RBP5.75□□□□□ -1.49
Tro-202ENSMUST00000087258 Gm10318A0A1W2P728 225 aa5.73□□□□□ -1.49
Tro-202ENSMUST00000087258 Gm9736A0A1W2P7N1 277 aa5.72□□□□□ -1.49
Tro-202ENSMUST00000087258 Kmt2bO08550 2713 aa5.71□□□□□ -1.49
Tro-202ENSMUST00000087258 Igsf10Q3V1M1 2594 aa5.68□□□□□ -1.5
Tro-202ENSMUST00000087258 9530053A07RikE9PVG8 2581 aa5.67□□□□□ -1.5
Tro-202ENSMUST00000087258 Ranbp2Q9ERU9 3053 aaKnown RBP5.67□□□□□ -1.5
Tro-202ENSMUST00000087258 Ash1lQ99MY8 2958 aa5.67□□□□□ -1.5
Tro-202ENSMUST00000087258 4933428G20RikQ9D3X4 101 aa5.66□□□□□ -1.5
Tro-202ENSMUST00000087258 Col12a1Q60847 3120 aa5.65□□□□□ -1.5
Tro-202ENSMUST00000087258 Itpr3P70227 2670 aa5.65□□□□□ -1.51
Tro-202ENSMUST00000087258 Tep1P97499 2629 aa5.64□□□□□ -1.51
Tro-202ENSMUST00000087258 SmcpP15265 143 aa5.64□□□□□ -1.51
Tro-202ENSMUST00000087258 Cep350E9Q309 3095 aa5.64□□□□□ -1.51
Tro-202ENSMUST00000087258 TrioQ0KL02 3102 aa5.63□□□□□ -1.51
Tro-202ENSMUST00000087258 Mki67E9PVX6 3177 aaKnown RBP5.62□□□□□ -1.51
Tro-202ENSMUST00000087258 Mast4Q811L6 2618 aa5.61□□□□□ -1.51
Tro-202ENSMUST00000087258 Nbeal2Q6ZQA0 2742 aa5.6□□□□□ -1.51
Tro-202ENSMUST00000087258 Dmxl1Q6PNC0 3013 aa5.6□□□□□ -1.51
Tro-202ENSMUST00000087258 BptfA2A654 3036 aaKnown RBP5.57□□□□□ -1.52
Tro-202ENSMUST00000087258 MgaA2AWL7 3003 aaKnown RBP5.55□□□□□ -1.52
Tro-202ENSMUST00000087258 Ubr5Q80TP3 2792 aa5.52□□□□□ -1.53
Tro-202ENSMUST00000087258 Chd6A3KFM7 2711 aa5.51□□□□□ -1.53
Tro-202ENSMUST00000087258 Usp34Q6ZQ93 3582 aa5.51□□□□□ -1.53
Tro-202ENSMUST00000087258 Rev3lQ61493 3122 aa5.5□□□□□ -1.53
Tro-202ENSMUST00000087258 Crct1Q6PAI5 102 aa5.49□□□□□ -1.53
Tro-202ENSMUST00000087258 HttP42859 3119 aa5.48□□□□□ -1.53
Tro-202ENSMUST00000087258 Lama2Q60675 3118 aaKnown RBP5.46□□□□□ -1.53
Tro-202ENSMUST00000087258 Celsr3Q91ZI0 3301 aa5.45□□□□□ -1.54
Tro-202ENSMUST00000087258 Unc80Q8BLN6 3261 aa5.44□□□□□ -1.54
Tro-202ENSMUST00000087258 Stab2Q8R4U0 2559 aa5.42□□□□□ -1.54
Tro-202ENSMUST00000087258 Frem2Q6NVD0 3160 aa5.42□□□□□ -1.54
Tro-202ENSMUST00000087258 Cdh23Q99PF4 3354 aa5.41□□□□□ -1.54
Tro-202ENSMUST00000087258 Cfap54Q8C6S9 3106 aa5.4□□□□□ -1.54
Tro-202ENSMUST00000087258 Celsr1O35161 3034 aa5.39□□□□□ -1.55
Tro-202ENSMUST00000087258 Gm19668J3QMD1 248 aa5.38□□□□□ -1.55
Tro-202ENSMUST00000087258 Tnrc18Q80WC3 2878 aa5.37□□□□□ -1.55
Tro-202ENSMUST00000087258 2310079G19RikQ9D6L6 185 aa5.36□□□□□ -1.55
Tro-202ENSMUST00000087258 Gm7173A0A0G2JEB6 3132 aa5.35□□□□□ -1.55
Tro-202ENSMUST00000087258 ApcQ61315 2845 aa5.34□□□□□ -1.55
Tro-202ENSMUST00000087258 Srrm2Q8BTI8 2703 aaKnown RBP5.34□□□□□ -1.55
Tro-202ENSMUST00000087258 Pkd1l1Q8R526 2615 aa5.34□□□□□ -1.55
Tro-202ENSMUST00000087258 FcgbpE9Q0B5 2583 aa5.33□□□□□ -1.56
Tro-202ENSMUST00000087258 Wdfy4E9Q2M9 3149 aa5.33□□□□□ -1.56
Tro-202ENSMUST00000087258 Gm6358A0A087WPH4 74 aa5.32□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 96.3 ms