RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Sprr1aQ62266 144 aa9,88□□□□□ -0,83
Col17a1-202ENSMUST00000086923 Zfp292Q9Z2U2 2698 aa9,85□□□□□ -0,83
Col17a1-202ENSMUST00000086923 HttP42859 3119 aa9,84□□□□□ -0,83
Col17a1-202ENSMUST00000086923 Notch1Q01705 2531 aa9,84□□□□□ -0,83
Col17a1-202ENSMUST00000086923 Fam229aB2KGE5 128 aa9,83□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Usp24B1AY13 2617 aaKnown RBP9,83□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Gm7173A0A0G2JEB6 3132 aa9,83□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Gm10065F6TJM2 114 aa9,82□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Mki67E9PVX6 3177 aaKnown RBP9,82□□□□□ -0,84
Col17a1-202ENSMUST00000086923 CicQ924A2 2510 aa9,82□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Prune2Q52KR3 3084 aa9,82□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Gm2310J3QNJ2 377 aa9,81□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Gm9112A2AI92 75 aa9,79□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Spink7Q6IE32 76 aa9,78□□□□□ -0,84
Col17a1-202ENSMUST00000086923 Ankrd11E9Q4F7 2643 aa9,76□□□□□ -0,85
Col17a1-202ENSMUST00000086923 Gm11565A2A4M7 156 aa9,76□□□□□ -0,85
Col17a1-202ENSMUST00000086923 Krtap14O08640 167 aa9,74□□□□□ -0,85
Col17a1-202ENSMUST00000086923 Tnrc18Q80WC3 2878 aa9,73□□□□□ -0,85
Col17a1-202ENSMUST00000086923 Col12a1Q60847 3120 aa9,72□□□□□ -0,85
Col17a1-202ENSMUST00000086923 Gm3233E9Q2H5 230 aa9,71□□□□□ -0,86
Col17a1-202ENSMUST00000086923 Cox6b2Q80ZN9 88 aa9,69□□□□□ -0,86
Col17a1-202ENSMUST00000086923 Camk2n1Q6QWF9 78 aa9,67□□□□□ -0,86
Col17a1-202ENSMUST00000086923 Chd7A2AJK6 2986 aaKnown RBP9,67□□□□□ -0,86
Col17a1-202ENSMUST00000086923 Gm9508A0A1W2P7W0 230 aa9,66□□□□□ -0,86
Col17a1-202ENSMUST00000086923 Lelp1Q9DAE3 120 aa9,66□□□□□ -0,86
Col17a1-202ENSMUST00000086923 Jbts17Q8CE72 3214 aa9,65□□□□□ -0,87
Col17a1-202ENSMUST00000086923 Map1aQ9QYR6 2776 aa9,63□□□□□ -0,87
Col17a1-202ENSMUST00000086923 Sec61bQ9CQS8 96 aaKnown RBP9,62□□□□□ -0,87
Col17a1-202ENSMUST00000086923 Gm19426M0QWC7 77 aa9,6□□□□□ -0,87
Col17a1-202ENSMUST00000086923 Cdh23Q99PF4 3354 aa9,58□□□□□ -0,88
Col17a1-202ENSMUST00000086923 Rev3lQ61493 3122 aa9,57□□□□□ -0,88
Col17a1-202ENSMUST00000086923 Prm2P07978 107 aa9,57□□□□□ -0,88
Col17a1-202ENSMUST00000086923 Myo15bI7HPW8 3033 aa9,57□□□□□ -0,88
Col17a1-202ENSMUST00000086923 Gm7138L7N2C3 230 aa9,53□□□□□ -0,88
Col17a1-202ENSMUST00000086923 Gm3238W4VSP7 230 aa9,53□□□□□ -0,88
Col17a1-202ENSMUST00000086923 FlnaQ8BTM8 2647 aaKnown RBP9,53□□□□□ -0,88
Col17a1-202ENSMUST00000086923 Utp20Q5XG71 2788 aaKnown RBP9,52□□□□□ -0,89
Col17a1-202ENSMUST00000086923 NipblQ6KCD5 2798 aaKnown RBP9,5□□□□□ -0,89
Col17a1-202ENSMUST00000086923 Gm9195A0A140LHT4 2805 aa9,49□□□□□ -0,89
Col17a1-202ENSMUST00000086923 Cfap54Q8C6S9 3106 aa9,49□□□□□ -0,89
Col17a1-202ENSMUST00000086923 Krtap15-1Q9QZU5 150 aa9,47□□□□□ -0,89
Col17a1-202ENSMUST00000086923 Itpr1P11881 2749 aa9,46□□□□□ -0,89
Col17a1-202ENSMUST00000086923 Akap13E9Q394 2776 aa9,44□□□□□ -0,9
Col17a1-202ENSMUST00000086923 Frem2Q6NVD0 3160 aa9,43□□□□□ -0,9
Col17a1-202ENSMUST00000086923 Bod1lE9Q6J5 3032 aa9,43□□□□□ -0,9
Col17a1-202ENSMUST00000086923 FlnbQ80X90 2602 aaKnown RBP9,43□□□□□ -0,9
Col17a1-202ENSMUST00000086923 Hectd1Q69ZR2 2618 aaKnown RBP9,43□□□□□ -0,9
Col17a1-202ENSMUST00000086923 2310050C09RikG5E8Z3 280 aa9,42□□□□□ -0,9
Col17a1-202ENSMUST00000086923 Szt2A2A9C3 3431 aa9,41□□□□□ -0,9
Col17a1-202ENSMUST00000086923 AtrQ9JKK8 2635 aa9,38□□□□□ -0,91
Col17a1-202ENSMUST00000086923 BC029722A0A0N4SW31 51 aa9,38□□□□□ -0,91
Col17a1-202ENSMUST00000086923 D6Ertd527eA0A0N4SWI3 464 aa9,37□□□□□ -0,91
Col17a1-202ENSMUST00000086923 Vps13aQ5H8C4 3166 aa9,36□□□□□ -0,91
Col17a1-202ENSMUST00000086923 Ranbp2Q9ERU9 3053 aaKnown RBP9,36□□□□□ -0,91
Col17a1-202ENSMUST00000086923 Gm17349F7BGH6 99 aa9,34□□□□□ -0,91
Col17a1-202ENSMUST00000086923 Gm7137J3QMW1 236 aa9,33□□□□□ -0,92
Col17a1-202ENSMUST00000086923 AtmQ62388 3066 aa9,33□□□□□ -0,92
Col17a1-202ENSMUST00000086923 Ash1lQ99MY8 2958 aa9,33□□□□□ -0,92
Col17a1-202ENSMUST00000086923 Krtap29-1A2A5X4 342 aa9,32□□□□□ -0,92
Col17a1-202ENSMUST00000086923 Krtap13O88375 197 aa9,32□□□□□ -0,92
Col17a1-202ENSMUST00000086923 Gm21887J3QQ04 176 aa9,3□□□□□ -0,92
Col17a1-202ENSMUST00000086923 KalrnA2CG49 2964 aa9,29□□□□□ -0,92
Col17a1-202ENSMUST00000086923 Fbn2Q61555 2907 aa9,28□□□□□ -0,92
Col17a1-202ENSMUST00000086923 Dmxl1Q6PNC0 3013 aa9,28□□□□□ -0,92
Col17a1-202ENSMUST00000086923 Gm5767A0A0J9YTU8 78 aa9,25□□□□□ -0,93
Col17a1-202ENSMUST00000086923 Chd6A3KFM7 2711 aa9,24□□□□□ -0,93
Col17a1-202ENSMUST00000086923 Gm20537G3UYK7 97 aa9,22□□□□□ -0,93
Col17a1-202ENSMUST00000086923 Stab1Q8R4Y4 2571 aa9,22□□□□□ -0,93
Col17a1-202ENSMUST00000086923 MgaA2AWL7 3003 aaKnown RBP9,22□□□□□ -0,93
Col17a1-202ENSMUST00000086923 Unc80Q8BLN6 3261 aa9,22□□□□□ -0,93
Col17a1-202ENSMUST00000086923 9530053A07RikE9PVG8 2581 aa9,21□□□□□ -0,94
Col17a1-202ENSMUST00000086923 Gm40193A0A1B0GT39 78 aa9,18□□□□□ -0,94
Col17a1-202ENSMUST00000086923 Lrrc37aB1AWG4 3215 aa9,17□□□□□ -0,94
Col17a1-202ENSMUST00000086923 Gm5965D3Z724 196 aa9,15□□□□□ -0,94
Col17a1-202ENSMUST00000086923 DspE9Q557 2883 aaKnown RBP9,13□□□□□ -0,95
Col17a1-202ENSMUST00000086923 Itpr3P70227 2670 aa9,13□□□□□ -0,95
Col17a1-202ENSMUST00000086923 Ubr5Q80TP3 2792 aa9,13□□□□□ -0,95
Col17a1-202ENSMUST00000086923 Igsf10Q3V1M1 2594 aa9,12□□□□□ -0,95
Col17a1-202ENSMUST00000086923 AspmQ8CJ27 3122 aa9,12□□□□□ -0,95
Col17a1-202ENSMUST00000086923 Tep1P97499 2629 aa9,11□□□□□ -0,95
Col17a1-202ENSMUST00000086923 Stab2Q8R4U0 2559 aa9,06□□□□□ -0,96
Col17a1-202ENSMUST00000086923 Mast4Q811L6 2618 aa9,04□□□□□ -0,96
Col17a1-202ENSMUST00000086923 2310057N15RikQ9D6T8 200 aa9,04□□□□□ -0,96
Col17a1-202ENSMUST00000086923 Tex15F8VPN2 2785 aa9,03□□□□□ -0,96
Col17a1-202ENSMUST00000086923 TgO08710 2766 aa9,01□□□□□ -0,97
Col17a1-202ENSMUST00000086923 FrylF8VQ05 3007 aa9□□□□□ -0,97
Col17a1-202ENSMUST00000086923 Nbeal2Q6ZQA0 2742 aa8,98□□□□□ -0,97
Col17a1-202ENSMUST00000086923 Lama1P19137 3084 aa8,96□□□□□ -0,97
Col17a1-202ENSMUST00000086923 ApcQ61315 2845 aa8,93□□□□□ -0,98
Col17a1-202ENSMUST00000086923 Wdfy4E9Q2M9 3149 aa8,93□□□□□ -0,98
Col17a1-202ENSMUST00000086923 BptfA2A654 3036 aaKnown RBP8,93□□□□□ -0,98
Col17a1-202ENSMUST00000086923 Tnp2P11378 117 aa8,91□□□□□ -0,98
Col17a1-202ENSMUST00000086923 Rps29P62274 56 aa8,91□□□□□ -0,98
Col17a1-202ENSMUST00000086923 Col6a3E9PWQ3 3284 aa8,9□□□□□ -0,98
Col17a1-202ENSMUST00000086923 Brca2P97929 3329 aa8,9□□□□□ -0,99
Col17a1-202ENSMUST00000086923 Gm36176A0A1W2P8D5 158 aa8,89□□□□□ -0,99
Col17a1-202ENSMUST00000086923 2310061N02RikQ9D6S9 174 aa8,89□□□□□ -0,99
Col17a1-202ENSMUST00000086923 Muc2Q80Z19 2680 aa8,88□□□□□ -0,99
Col17a1-202ENSMUST00000086923 Col6a5A6H584 2640 aa8,87□□□□□ -0,99
Col17a1-202ENSMUST00000086923 Celsr3Q91ZI0 3301 aa8,86□□□□□ -0,99
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