RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 P84750 121 aa11.29□□□□□ -0.6
Col4a3bp-201ENSMUST00000077672 Notch1Q01705 2531 aa11.28□□□□□ -0.6
Col4a3bp-201ENSMUST00000077672 Gm44790A0A0N4SV91 103 aa11.28□□□□□ -0.6
Col4a3bp-201ENSMUST00000077672 Dmac1Q9CQ00 111 aa11.28□□□□□ -0.6
Col4a3bp-201ENSMUST00000077672 Fam168bQ80XQ8 194 aa11.26□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Gm16485Q8C4B7 115 aa11.25□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Itpr2Q9Z329 2701 aa11.25□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Sprr1aQ62266 144 aa11.25□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Gm11627A6PWP4 55 aa11.24□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Phxr4P15974 95 aa11.23□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Defb40Q70KL2 73 aa11.23□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Gm12353A2AGJ4 60 aa11.22□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Wfdc6bF6ULY1 148 aa11.22□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 PscaP57096 123 aa11.22□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Dnah3Q8BW94 4083 aa11.21□□□□□ -0.61
Col4a3bp-201ENSMUST00000077672 Vpreb3D3Z6J4 130 aa11.18□□□□□ -0.62
Col4a3bp-201ENSMUST00000077672 Gm17521F6QAC8 156 aa11.18□□□□□ -0.62
Col4a3bp-201ENSMUST00000077672 Stab1Q8R4Y4 2571 aa11.18□□□□□ -0.62
Col4a3bp-201ENSMUST00000077672 Obox2E9PXV9 151 aa11.17□□□□□ -0.62
Col4a3bp-201ENSMUST00000077672 Prol1E9PYQ4 312 aa11.17□□□□□ -0.62
Col4a3bp-201ENSMUST00000077672 Gm10160F6Y577 67 aa11.15□□□□□ -0.62
Col4a3bp-201ENSMUST00000077672 Igkv3-12A0A140T8P0 119 aa11.15□□□□□ -0.62
Col4a3bp-201ENSMUST00000077672 Col6a5A6H584 2640 aa11.14□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 A0A286YE49 62 aa11.14□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 B9d2Q3UK10 175 aa11.12□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 Gm21886J3QJU9 214 aa11.11□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 FlnbQ80X90 2602 aaKnown RBP11.11□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 Ube2bP63147 152 aa11.1□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 1700018G05RikA0A1B0GSI2 66 aa11.09□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 Fam104aA2A6P4 185 aa11.09□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 Srrm2Q8BTI8 2703 aaKnown RBP11.09□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 Gm10643Q3URG9 111 aa11.09□□□□□ -0.63
Col4a3bp-201ENSMUST00000077672 1700074P13RikQ9D9G7 251 aa11.08□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 U90926O08546 118 aa11.07□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Gm36176A0A1W2P8D5 158 aa11.06□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Sslp1Q3UN54 99 aa11.05□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Hivep1Q03172 2688 aa11.05□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Zcchc13Q9D548 170 aa11.05□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Ube2aQ9Z255 152 aa11.05□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 1700042G07RikB1AUF7 90 aa11.04□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Reg3aO09037 175 aa11.04□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Nsd1O88491 2588 aaKnown RBP11.04□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Dnah1E9Q8T7 4250 aa11.03□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Dnah7bL7N1Y0 4068 aa11.03□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Gm7137J3QMW1 236 aa11.03□□□□□ -0.64
Col4a3bp-201ENSMUST00000077672 Dnah10D3YYQ8 4591 aa11.02□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 Dnah17Q69Z23 4481 aa11.01□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 Dnah14A0A140LIJ4 4489 aa11.01□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 Gm26620Q9CY65 116 aa11□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 Chtf8P0CG14 533 aa11□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 Odf3bQ5M8M2 238 aa10.99□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 Wfdc13Q5DQQ6 81 aa10.97□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 Fn1P11276 2477 aaKnown RBP10.96□□□□□ -0.65
Col4a3bp-201ENSMUST00000077672 TgO08710 2766 aa10.95□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 Gm10139O88245 57 aa10.93□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 HrnrQ8VHD8 2496 aa10.93□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 Gm10837Q3UTT8 145 aa10.93□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 Chchd10Q7TNL9 138 aa10.93□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 Gm28230A0A0A0MQ91 144 aa10.92□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 Rpl37aP61514 92 aa10.92□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 Igkv3-3A0A140T8Q0 119 aa10.9□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 SycnQ8VCK7 134 aa10.9□□□□□ -0.66
Col4a3bp-201ENSMUST00000077672 Gm20604F8WIA3 75 aa10.89□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 Gm2310J3QNJ2 377 aa10.89□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 Gm3646F6S692 53 aa10.89□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 Dnah6E9Q0B6 4144 aa10.86□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 SptssbQ925E8 76 aa10.86□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 2310061N02RikQ9D6S9 174 aa10.86□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 Wfdc17Q5SSJ1 76 aa10.86□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 VwfQ8CIZ8 2813 aa10.85□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 Phf5aP83870 110 aaKnown RBP10.84□□□□□ -0.67
Col4a3bp-201ENSMUST00000077672 Igkv3-7A0A0G2JE31 119 aa10.83□□□□□ -0.68
Col4a3bp-201ENSMUST00000077672 9530053A07RikE9PVG8 2581 aa10.82□□□□□ -0.68
Col4a3bp-201ENSMUST00000077672 Gm10267M0QWD8 85 aa10.82□□□□□ -0.68
Col4a3bp-201ENSMUST00000077672 Ndufb1P0DN34 57 aa10.82□□□□□ -0.68
Col4a3bp-201ENSMUST00000077672 Gm20661K7N787 53 aa10.81□□□□□ -0.68
Col4a3bp-201ENSMUST00000077672 OxtP35454 125 aa10.81□□□□□ -0.68
Col4a3bp-201ENSMUST00000077672 Wfdc10Q3V2J9 124 aa10.8□□□□□ -0.68
Col4a3bp-201ENSMUST00000077672 Gm9508A0A1W2P7W0 230 aa10.76□□□□□ -0.69
Col4a3bp-201ENSMUST00000077672 Csmd3Q80T79 3707 aa10.75□□□□□ -0.69
Col4a3bp-201ENSMUST00000077672 Dnah11E9Q7N9 4488 aa10.74□□□□□ -0.69
Col4a3bp-201ENSMUST00000077672 AW011738F6S7Q2 159 aa10.74□□□□□ -0.69
Col4a3bp-201ENSMUST00000077672 Defb9Q8R2I6 67 aa10.7□□□□□ -0.7
Col4a3bp-201ENSMUST00000077672 Plac8Q9JI48 112 aa10.68□□□□□ -0.7
Col4a3bp-201ENSMUST00000077672 Igkv3-5A0A140T8M6 119 aa10.67□□□□□ -0.7
Col4a3bp-201ENSMUST00000077672 6030445D17RikE9Q8F9 148 aa10.67□□□□□ -0.7
Col4a3bp-201ENSMUST00000077672 FasnP19096 2504 aaKnown RBP10.65□□□□□ -0.7
Col4a3bp-201ENSMUST00000077672 Dnah9B1AR51 4484 aa10.65□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Defb38Q7TNV7 63 aa10.64□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Gm27235Q3UW50 83 aa10.64□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Limd2Q8BGB5 128 aa10.64□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Dync2h1Q45VK7 4306 aa10.63□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Stab2Q8R4U0 2559 aa10.63□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 1700012A03RikQ9DAF1 130 aa10.62□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Megf8P60882 2789 aa10.62□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Nupr2Q497P3 102 aa10.61□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Gm10642Q3TWM1 71 aa10.59□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Tenm2Q9WTS5 2764 aa10.59□□□□□ -0.71
Col4a3bp-201ENSMUST00000077672 Q8K1L6 76 aa10.57□□□□□ -0.72
Col4a3bp-201ENSMUST00000077672 Uqcr11Q9CPX8 56 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms