RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 AtrQ9JKK8 2635 aa6.1□□□□□ -1.43
Ubr1-201ENSMUST00000028728 Gm2310J3QNJ2 377 aa6.1□□□□□ -1.43
Ubr1-201ENSMUST00000028728 Romo1P60603 79 aa6.1□□□□□ -1.43
Ubr1-201ENSMUST00000028728 Tnrc18Q80WC3 2878 aa6.09□□□□□ -1.43
Ubr1-201ENSMUST00000028728 Rpl37Q9D823 97 aa6.09□□□□□ -1.43
Ubr1-201ENSMUST00000028728 Ep400Q8CHI8 3072 aaKnown RBP6.08□□□□□ -1.44
Ubr1-201ENSMUST00000028728 Cep350E9Q309 3095 aa6.07□□□□□ -1.44
Ubr1-201ENSMUST00000028728 Gm42715A0A087WP63 3095 aaKnown RBP6.05□□□□□ -1.44
Ubr1-201ENSMUST00000028728 FlnbQ80X90 2602 aaKnown RBP6.05□□□□□ -1.44
Ubr1-201ENSMUST00000028728 Gm3233E9Q2H5 230 aa6.03□□□□□ -1.44
Ubr1-201ENSMUST00000028728 OxtP35454 125 aa6.02□□□□□ -1.45
Ubr1-201ENSMUST00000028728 Cox6b2Q80ZN9 88 aa5.98□□□□□ -1.45
Ubr1-201ENSMUST00000028728 Krtap29-1A2A5X4 342 aa5.97□□□□□ -1.45
Ubr1-201ENSMUST00000028728 Gm10382Q3V0T5 144 aa5.97□□□□□ -1.45
Ubr1-201ENSMUST00000028728 Stab1Q8R4Y4 2571 aa5.97□□□□□ -1.45
Ubr1-201ENSMUST00000028728 Akap13E9Q394 2776 aa5.95□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Prune2Q52KR3 3084 aa5.94□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Chd6A3KFM7 2711 aa5.92□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Gm7138L7N2C3 230 aa5.92□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Gm3238W4VSP7 230 aa5.92□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Hectd1Q69ZR2 2618 aaKnown RBP5.92□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Fam229aB2KGE5 128 aa5.9□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Spink7Q6IE32 76 aa5.9□□□□□ -1.46
Ubr1-201ENSMUST00000028728 Chd7A2AJK6 2986 aaKnown RBP5.87□□□□□ -1.47
Ubr1-201ENSMUST00000028728 Itpr1P11881 2749 aa5.87□□□□□ -1.47
Ubr1-201ENSMUST00000028728 Tep1P97499 2629 aa5.85□□□□□ -1.47
Ubr1-201ENSMUST00000028728 Camk2n1Q6QWF9 78 aa5.85□□□□□ -1.47
Ubr1-201ENSMUST00000028728 Ash1lQ99MY8 2958 aa5.84□□□□□ -1.47
Ubr1-201ENSMUST00000028728 Gm5767A0A0J9YTU8 78 aa5.84□□□□□ -1.47
Ubr1-201ENSMUST00000028728 TrioQ0KL02 3102 aa5.83□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Stab2Q8R4U0 2559 aa5.83□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Rps29P62274 56 aa5.83□□□□□ -1.48
Ubr1-201ENSMUST00000028728 2310050C09RikG5E8Z3 280 aa5.82□□□□□ -1.48
Ubr1-201ENSMUST00000028728 BC029722A0A0N4SW31 51 aa5.82□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Gm9508A0A1W2P7W0 230 aa5.82□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Krtap15-1Q9QZU5 150 aa5.81□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Mast4Q811L6 2618 aa5.81□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Itpr3P70227 2670 aa5.8□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Dmxl1Q6PNC0 3013 aa5.8□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Gm19426M0QWC7 77 aa5.79□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Jbts17Q8CE72 3214 aa5.79□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Lama2Q60675 3118 aaKnown RBP5.79□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Krtap14O08640 167 aa5.79□□□□□ -1.48
Ubr1-201ENSMUST00000028728 Fbn2Q61555 2907 aa5.78□□□□□ -1.48
Ubr1-201ENSMUST00000028728 D6Ertd527eA0A0N4SWI3 464 aa5.77□□□□□ -1.49
Ubr1-201ENSMUST00000028728 Gm7137J3QMW1 236 aa5.77□□□□□ -1.49
Ubr1-201ENSMUST00000028728 Bod1lE9Q6J5 3032 aa5.76□□□□□ -1.49
Ubr1-201ENSMUST00000028728 Cfap54Q8C6S9 3106 aa5.76□□□□□ -1.49
Ubr1-201ENSMUST00000028728 Ubr5Q80TP3 2792 aa5.75□□□□□ -1.49
Ubr1-201ENSMUST00000028728 Gm17349F7BGH6 99 aa5.75□□□□□ -1.49
Ubr1-201ENSMUST00000028728 Tnp2P11378 117 aa5.75□□□□□ -1.49
Ubr1-201ENSMUST00000028728 2310061N02RikQ9D6S9 174 aa5.74□□□□□ -1.49
Ubr1-201ENSMUST00000028728 Ndufaf8A2AMZ4 74 aa5.73□□□□□ -1.49
Ubr1-201ENSMUST00000028728 9530053A07RikE9PVG8 2581 aa5.7□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Mki67E9PVX6 3177 aaKnown RBP5.7□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Igsf10Q3V1M1 2594 aa5.7□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Sec61bQ9CQS8 96 aaKnown RBP5.7□□□□□ -1.5
Ubr1-201ENSMUST00000028728 TgO08710 2766 aa5.69□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Krtap13O88375 197 aa5.67□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Ranbp2Q9ERU9 3053 aaKnown RBP5.67□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Gm40193A0A1B0GT39 78 aa5.67□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Tex15F8VPN2 2785 aa5.66□□□□□ -1.5
Ubr1-201ENSMUST00000028728 UtrnE9Q6R7 3430 aa5.65□□□□□ -1.5
Ubr1-201ENSMUST00000028728 MgaA2AWL7 3003 aaKnown RBP5.65□□□□□ -1.5
Ubr1-201ENSMUST00000028728 Myo15bI7HPW8 3033 aa5.65□□□□□ -1.51
Ubr1-201ENSMUST00000028728 Pkd1l1Q8R526 2615 aa5.64□□□□□ -1.51
Ubr1-201ENSMUST00000028728 Gm36176A0A1W2P8D5 158 aa5.63□□□□□ -1.51
Ubr1-201ENSMUST00000028728 Col6a5A6H584 2640 aa5.63□□□□□ -1.51
Ubr1-201ENSMUST00000028728 Utp20Q5XG71 2788 aaKnown RBP5.62□□□□□ -1.51
Ubr1-201ENSMUST00000028728 Col12a1Q60847 3120 aa5.62□□□□□ -1.51
Ubr1-201ENSMUST00000028728 Muc2Q80Z19 2680 aa5.62□□□□□ -1.51
Ubr1-201ENSMUST00000028728 KalrnA2CG49 2964 aa5.6□□□□□ -1.51
Ubr1-201ENSMUST00000028728 Gm9112A2AI92 75 aa5.59□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Nbeal2Q6ZQA0 2742 aa5.58□□□□□ -1.52
Ubr1-201ENSMUST00000028728 HttP42859 3119 aa5.57□□□□□ -1.52
Ubr1-201ENSMUST00000028728 ApcQ61315 2845 aa5.57□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Gm7173A0A0G2JEB6 3132 aa5.56□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Vps13aQ5H8C4 3166 aa5.55□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Gm20537G3UYK7 97 aa5.55□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Hivep1Q03172 2688 aa5.53□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Srrm2Q8BTI8 2703 aaKnown RBP5.53□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Lama3Q61789 3330 aa5.53□□□□□ -1.52
Ubr1-201ENSMUST00000028728 Rev3lQ61493 3122 aa5.53□□□□□ -1.52
Ubr1-201ENSMUST00000028728 A930033H14RikG5E8X6 103 aa5.51□□□□□ -1.53
Ubr1-201ENSMUST00000028728 Frem2Q6NVD0 3160 aa5.51□□□□□ -1.53
Ubr1-201ENSMUST00000028728 FcgbpE9Q0B5 2583 aa5.51□□□□□ -1.53
Ubr1-201ENSMUST00000028728 Igfn1Q3KNY0 2849 aa5.49□□□□□ -1.53
Ubr1-201ENSMUST00000028728 Itpr2Q9Z329 2701 aa5.49□□□□□ -1.53
Ubr1-201ENSMUST00000028728 2310079G19RikQ9D6L6 185 aa5.46□□□□□ -1.53
Ubr1-201ENSMUST00000028728 Celsr1O35161 3034 aa5.45□□□□□ -1.54
Ubr1-201ENSMUST00000028728 Gm21887J3QQ04 176 aa5.44□□□□□ -1.54
Ubr1-201ENSMUST00000028728 DspE9Q557 2883 aaKnown RBP5.44□□□□□ -1.54
Ubr1-201ENSMUST00000028728 FryE9Q8I9 3020 aa5.44□□□□□ -1.54
Ubr1-201ENSMUST00000028728 FrylF8VQ05 3007 aa5.43□□□□□ -1.54
Ubr1-201ENSMUST00000028728 Gm9507D3Z5T3 223 aa5.41□□□□□ -1.54
Ubr1-201ENSMUST00000028728 Zzef1Q5SSH7 2924 aa5.39□□□□□ -1.55
Ubr1-201ENSMUST00000028728 FlncQ8VHX6 2726 aaKnown RBP5.39□□□□□ -1.55
Ubr1-201ENSMUST00000028728 Tnp1P10856 55 aa5.39□□□□□ -1.55
Ubr1-201ENSMUST00000028728 AspmQ8CJ27 3122 aa5.37□□□□□ -1.55
Ubr1-201ENSMUST00000028728 BptfA2A654 3036 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms