RNA–Protein interactions for RNA: ENSMUST00000020931.5

Smc6-201, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc6, Length 5,603 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-201ENSMUST00000020931 Gm16253D3Z167 63 aa11,34□□□□□ -0,59
Smc6-201ENSMUST00000020931 BC029722A0A0N4SW31 51 aa11,27□□□□□ -0,6
Smc6-201ENSMUST00000020931 Krtap29-1A2A5X4 342 aa11,27□□□□□ -0,6
Smc6-201ENSMUST00000020931 Nsd1O88491 2588 aaKnown RBP11,26□□□□□ -0,61
Smc6-201ENSMUST00000020931 Myo18bE9PV66 2605 aa11,19□□□□□ -0,62
Smc6-201ENSMUST00000020931 Ankrd11E9Q4F7 2643 aa11,17□□□□□ -0,62
Smc6-201ENSMUST00000020931 CenpfE9Q3P4 2997 aaKnown RBP11,15□□□□□ -0,62
Smc6-201ENSMUST00000020931 Prrc2cQ3TLH4 2846 aaKnown RBP11,14□□□□□ -0,63
Smc6-201ENSMUST00000020931 FasnP19096 2504 aaKnown RBP11,14□□□□□ -0,63
Smc6-201ENSMUST00000020931 Fn1P11276 2477 aaKnown RBP11,11□□□□□ -0,63
Smc6-201ENSMUST00000020931 Krtap13O88375 197 aa11,11□□□□□ -0,63
Smc6-201ENSMUST00000020931 Gm9112A2AI92 75 aa11,1□□□□□ -0,63
Smc6-201ENSMUST00000020931 2310050C09RikG5E8Z3 280 aa11,08□□□□□ -0,64
Smc6-201ENSMUST00000020931 Gcn1E9PVA8 2671 aaKnown RBP11,07□□□□□ -0,64
Smc6-201ENSMUST00000020931 AtrQ9JKK8 2635 aa11,06□□□□□ -0,64
Smc6-201ENSMUST00000020931 Usp24B1AY13 2617 aaKnown RBP11,05□□□□□ -0,64
Smc6-201ENSMUST00000020931 Zfp292Q9Z2U2 2698 aa11,04□□□□□ -0,64
Smc6-201ENSMUST00000020931 FlnbQ80X90 2602 aaKnown RBP11,03□□□□□ -0,64
Smc6-201ENSMUST00000020931 Krtap14O08640 167 aa11,03□□□□□ -0,64
Smc6-201ENSMUST00000020931 Gm9507D3Z5T3 223 aa11□□□□□ -0,65
Smc6-201ENSMUST00000020931 Gm2310J3QNJ2 377 aa10,99□□□□□ -0,65
Smc6-201ENSMUST00000020931 Kmt2bO08550 2713 aa10,93□□□□□ -0,66
Smc6-201ENSMUST00000020931 Cox6b2Q80ZN9 88 aa10,9□□□□□ -0,66
Smc6-201ENSMUST00000020931 FlnaQ8BTM8 2647 aaKnown RBP10,9□□□□□ -0,66
Smc6-201ENSMUST00000020931 Jbts17Q8CE72 3214 aa10,87□□□□□ -0,67
Smc6-201ENSMUST00000020931 Rps29P62274 56 aa10,85□□□□□ -0,67
Smc6-201ENSMUST00000020931 Notch1Q01705 2531 aa10,85□□□□□ -0,67
Smc6-201ENSMUST00000020931 Gm9195A0A140LHT4 2805 aa10,83□□□□□ -0,68
Smc6-201ENSMUST00000020931 Krtap10-4Q08EG8 221 aa10,82□□□□□ -0,68
Smc6-201ENSMUST00000020931 Prm2P07978 107 aa10,78□□□□□ -0,68
Smc6-201ENSMUST00000020931 Tnp2P11378 117 aa10,74□□□□□ -0,69
Smc6-201ENSMUST00000020931 Krtap10-10A0A1W2P7T6 217 aa10,73□□□□□ -0,69
Smc6-201ENSMUST00000020931 Dnah12Q3V0Q1 3086 aa10,72□□□□□ -0,69
Smc6-201ENSMUST00000020931 PcntP48725 2898 aa10,72□□□□□ -0,69
Smc6-201ENSMUST00000020931 Ep400Q8CHI8 3072 aaKnown RBP10,68□□□□□ -0,7
Smc6-201ENSMUST00000020931 Bod1lE9Q6J5 3032 aa10,66□□□□□ -0,7
Smc6-201ENSMUST00000020931 2310061N02RikQ9D6S9 174 aa10,63□□□□□ -0,71
Smc6-201ENSMUST00000020931 Map1aQ9QYR6 2776 aa10,61□□□□□ -0,71
Smc6-201ENSMUST00000020931 Lama2Q60675 3118 aaKnown RBP10,6□□□□□ -0,71
Smc6-201ENSMUST00000020931 Hectd1Q69ZR2 2618 aaKnown RBP10,59□□□□□ -0,71
Smc6-201ENSMUST00000020931 Gm42715A0A087WP63 3095 aaKnown RBP10,59□□□□□ -0,71
Smc6-201ENSMUST00000020931 Gm21887J3QQ04 176 aa10,59□□□□□ -0,71
Smc6-201ENSMUST00000020931 D6Ertd527eA0A0N4SWI3 464 aa10,59□□□□□ -0,71
Smc6-201ENSMUST00000020931 Prune2Q52KR3 3084 aa10,58□□□□□ -0,72
Smc6-201ENSMUST00000020931 Cep350E9Q309 3095 aa10,58□□□□□ -0,72
Smc6-201ENSMUST00000020931 Stab1Q8R4Y4 2571 aa10,54□□□□□ -0,72
Smc6-201ENSMUST00000020931 Akap13E9Q394 2776 aa10,52□□□□□ -0,72
Smc6-201ENSMUST00000020931 TrioQ0KL02 3102 aa10,49□□□□□ -0,73
Smc6-201ENSMUST00000020931 Frem2Q6NVD0 3160 aa10,49□□□□□ -0,73
Smc6-201ENSMUST00000020931 UtrnE9Q6R7 3430 aa10,43□□□□□ -0,74
Smc6-201ENSMUST00000020931 Gm2696A0A1W2P709 240 aa10,43□□□□□ -0,74
Smc6-201ENSMUST00000020931 Ranbp2Q9ERU9 3053 aaKnown RBP10,43□□□□□ -0,74
Smc6-201ENSMUST00000020931 NipblQ6KCD5 2798 aaKnown RBP10,42□□□□□ -0,74
Smc6-201ENSMUST00000020931 Utp20Q5XG71 2788 aaKnown RBP10,4□□□□□ -0,74
Smc6-201ENSMUST00000020931 Gm20537G3UYK7 97 aa10,39□□□□□ -0,75
Smc6-201ENSMUST00000020931 Cfap54Q8C6S9 3106 aa10,39□□□□□ -0,75
Smc6-201ENSMUST00000020931 2310057N15RikQ9D6T8 200 aa10,38□□□□□ -0,75
Smc6-201ENSMUST00000020931 Tnp1P10856 55 aa10,34□□□□□ -0,75
Smc6-201ENSMUST00000020931 Ash1lQ99MY8 2958 aa10,34□□□□□ -0,75
Smc6-201ENSMUST00000020931 Gm5965D3Z724 196 aa10,34□□□□□ -0,75
Smc6-201ENSMUST00000020931 Igsf10Q3V1M1 2594 aa10,33□□□□□ -0,76
Smc6-201ENSMUST00000020931 Dmxl1Q6PNC0 3013 aa10,31□□□□□ -0,76
Smc6-201ENSMUST00000020931 Gm40193A0A1B0GT39 78 aa10,3□□□□□ -0,76
Smc6-201ENSMUST00000020931 Mast4Q811L6 2618 aa10,25□□□□□ -0,77
Smc6-201ENSMUST00000020931 Mki67E9PVX6 3177 aaKnown RBP10,23□□□□□ -0,77
Smc6-201ENSMUST00000020931 9530053A07RikE9PVG8 2581 aa10,23□□□□□ -0,77
Smc6-201ENSMUST00000020931 Itpr3P70227 2670 aa10,21□□□□□ -0,78
Smc6-201ENSMUST00000020931 Chd6A3KFM7 2711 aa10,2□□□□□ -0,78
Smc6-201ENSMUST00000020931 Usp34Q6ZQ93 3582 aa10,16□□□□□ -0,78
Smc6-201ENSMUST00000020931 Tep1P97499 2629 aa10,16□□□□□ -0,78
Smc6-201ENSMUST00000020931 A930033H14RikG5E8X6 103 aa10,15□□□□□ -0,78
Smc6-201ENSMUST00000020931 Lama3Q61789 3330 aa10,14□□□□□ -0,79
Smc6-201ENSMUST00000020931 Ubr5Q80TP3 2792 aa10,13□□□□□ -0,79
Smc6-201ENSMUST00000020931 DspE9Q557 2883 aaKnown RBP10,1□□□□□ -0,79
Smc6-201ENSMUST00000020931 Stab2Q8R4U0 2559 aa10,04□□□□□ -0,8
Smc6-201ENSMUST00000020931 Unc80Q8BLN6 3261 aa10,02□□□□□ -0,8
Smc6-201ENSMUST00000020931 TgO08710 2766 aa9,96□□□□□ -0,81
Smc6-201ENSMUST00000020931 Col12a1Q60847 3120 aa9,92□□□□□ -0,82
Smc6-201ENSMUST00000020931 Nbeal2Q6ZQA0 2742 aa9,92□□□□□ -0,82
Smc6-201ENSMUST00000020931 ApcQ61315 2845 aa9,91□□□□□ -0,82
Smc6-201ENSMUST00000020931 Vps13aQ5H8C4 3166 aa9,89□□□□□ -0,83
Smc6-201ENSMUST00000020931 B930094E09RikQ8C4T2 136 aa9,89□□□□□ -0,83
Smc6-201ENSMUST00000020931 KalrnA2CG49 2964 aa9,87□□□□□ -0,83
Smc6-201ENSMUST00000020931 Tex15F8VPN2 2785 aa9,86□□□□□ -0,83
Smc6-201ENSMUST00000020931 BptfA2A654 3036 aaKnown RBP9,84□□□□□ -0,83
Smc6-201ENSMUST00000020931 Chd7A2AJK6 2986 aaKnown RBP9,84□□□□□ -0,83
Smc6-201ENSMUST00000020931 Itpr1P11881 2749 aa9,83□□□□□ -0,84
Smc6-201ENSMUST00000020931 Fbn2Q61555 2907 aa9,83□□□□□ -0,84
Smc6-201ENSMUST00000020931 2310079G19RikQ9D6L6 185 aa9,81□□□□□ -0,84
Smc6-201ENSMUST00000020931 Tnrc18Q80WC3 2878 aa9,79□□□□□ -0,84
Smc6-201ENSMUST00000020931 Pkd1l1Q8R526 2615 aa9,79□□□□□ -0,84
Smc6-201ENSMUST00000020931 FcgbpE9Q0B5 2583 aa9,77□□□□□ -0,85
Smc6-201ENSMUST00000020931 Col6a5A6H584 2640 aa9,77□□□□□ -0,85
Smc6-201ENSMUST00000020931 Celsr3Q91ZI0 3301 aa9,76□□□□□ -0,85
Smc6-201ENSMUST00000020931 Srrm2Q8BTI8 2703 aaKnown RBP9,76□□□□□ -0,85
Smc6-201ENSMUST00000020931 Celsr1O35161 3034 aa9,76□□□□□ -0,85
Smc6-201ENSMUST00000020931 MgaA2AWL7 3003 aaKnown RBP9,75□□□□□ -0,85
Smc6-201ENSMUST00000020931 Gm7173A0A0G2JEB6 3132 aa9,67□□□□□ -0,86
Smc6-201ENSMUST00000020931 Lama1P19137 3084 aa9,66□□□□□ -0,86
Smc6-201ENSMUST00000020931 Myo15bI7HPW8 3033 aa9,63□□□□□ -0,87
Retrieved 100 of 22,080 RNA–protein pairs in 10,6 ms