RNA–Protein interactions for RNA: ENSMUST00000117269.7

Traf3-203, Transcript of TNF receptor-associated factor 3, mousemouse

TSL 1 (best) BASIC

Gene Traf3, Length 6,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-203ENSMUST00000117269 Ptpn13Q64512 2453 aa12,5□□□□□ -0,41
Traf3-203ENSMUST00000117269 Gm10308Q9CVR5 141 aa12,5□□□□□ -0,41
Traf3-203ENSMUST00000117269 Hcfc1Q61191 2045 aaKnown RBP12,5□□□□□ -0,41
Traf3-203ENSMUST00000117269 Coa5Q99M07 74 aa12,5□□□□□ -0,41
Traf3-203ENSMUST00000117269 Krtap11-1E9Q2E9 183 aa12,48□□□□□ -0,41
Traf3-203ENSMUST00000117269 1810062G17RikG3X8Y2 129 aa12,48□□□□□ -0,41
Traf3-203ENSMUST00000117269 SrcapA0A087WQ44 3271 aa12,48□□□□□ -0,41
Traf3-203ENSMUST00000117269 Psors1c2Q80ZC9 134 aa12,44□□□□□ -0,42
Traf3-203ENSMUST00000117269 Rnase13Q5GAM7 153 aa12,42□□□□□ -0,42
Traf3-203ENSMUST00000117269 Cdc42se1Q8BHL7 80 aa12,42□□□□□ -0,42
Traf3-203ENSMUST00000117269 Zfp462B1AWL2 2495 aaKnown RBP12,42□□□□□ -0,42
Traf3-203ENSMUST00000117269 TrrapQ80YV3 2565 aaKnown RBP12,4□□□□□ -0,43
Traf3-203ENSMUST00000117269 Usp9xP70398 2559 aaKnown RBP12,39□□□□□ -0,43
Traf3-203ENSMUST00000117269 Krtap26-1Q9D7N2 215 aa12,39□□□□□ -0,43
Traf3-203ENSMUST00000117269 Sprr4Q8CGN8 76 aa12,36□□□□□ -0,43
Traf3-203ENSMUST00000117269 Prr13Q9CQJ5 137 aa12,35□□□□□ -0,43
Traf3-203ENSMUST00000117269 Gm20538F6Z9R1 75 aa12,34□□□□□ -0,43
Traf3-203ENSMUST00000117269 PolqQ8CGS6 2544 aa12,32□□□□□ -0,44
Traf3-203ENSMUST00000117269 Eif4ebp3Q80VV3 101 aa12,29□□□□□ -0,44
Traf3-203ENSMUST00000117269 AY074887Q8R5F9 132 aa12,29□□□□□ -0,44
Traf3-203ENSMUST00000117269 Anapc11Q9CPX9 84 aa12,26□□□□□ -0,45
Traf3-203ENSMUST00000117269 Pla2g10Q9QXX3 151 aa12,26□□□□□ -0,45
Traf3-203ENSMUST00000117269 Defb9Q8R2I6 67 aa12,25□□□□□ -0,45
Traf3-203ENSMUST00000117269 SetxA2AKX3 2646 aa12,25□□□□□ -0,45
Traf3-203ENSMUST00000117269 Phxr4P15974 95 aa12,25□□□□□ -0,45
Traf3-203ENSMUST00000117269 Cypt15B1AXS0 87 aa12,25□□□□□ -0,45
Traf3-203ENSMUST00000117269 A330070K13RikQ8CA53 115 aa12,23□□□□□ -0,45
Traf3-203ENSMUST00000117269 Uqcr11Q9CPX8 56 aa12,21□□□□□ -0,45
Traf3-203ENSMUST00000117269 Sprr1bQ62267 153 aa12,21□□□□□ -0,45
Traf3-203ENSMUST00000117269 Setd2E9Q5F9 2537 aa12,2□□□□□ -0,46
Traf3-203ENSMUST00000117269 Plac8Q9JI48 112 aa12,18□□□□□ -0,46
Traf3-203ENSMUST00000117269 Bahcc1Q3UHR0 2643 aa12,17□□□□□ -0,46
Traf3-203ENSMUST00000117269 C530025M09RikF6RGA8 229 aa12,16□□□□□ -0,46
Traf3-203ENSMUST00000117269 Gm3233E9Q2H5 230 aa12,13□□□□□ -0,47
Traf3-203ENSMUST00000117269 MtorQ9JLN9 2549 aa12,13□□□□□ -0,47
Traf3-203ENSMUST00000117269 Gm7276Q3TYW4 209 aa12,12□□□□□ -0,47
Traf3-203ENSMUST00000117269 Lypd5Q9D7Z7 256 aa12,11□□□□□ -0,47
Traf3-203ENSMUST00000117269 Cep192E9Q4Y4 2514 aaKnown RBP12,09□□□□□ -0,47
Traf3-203ENSMUST00000117269 AW011738F6S7Q2 159 aa12,09□□□□□ -0,47
Traf3-203ENSMUST00000117269 Gm26620Q9CY65 116 aa12,06□□□□□ -0,48
Traf3-203ENSMUST00000117269 Epg5Q80TA9 2572 aa12,05□□□□□ -0,48
Traf3-203ENSMUST00000117269 Chtf8P0CG14 533 aa12,04□□□□□ -0,48
Traf3-203ENSMUST00000117269 CriptO70333 101 aa12,04□□□□□ -0,48
Traf3-203ENSMUST00000117269 OxtP35454 125 aa12,04□□□□□ -0,48
Traf3-203ENSMUST00000117269 Gm11213A0A1B0GR83 88 aa12□□□□□ -0,49
Traf3-203ENSMUST00000117269 Gm21798J3QNU5 87 aa11,99□□□□□ -0,49
Traf3-203ENSMUST00000117269 2310034C09RikQ9D746 214 aa11,99□□□□□ -0,49
Traf3-203ENSMUST00000117269 Gm10643Q3URG9 111 aa11,96□□□□□ -0,49
Traf3-203ENSMUST00000117269 Fam104aA2A6P4 185 aa11,95□□□□□ -0,5
Traf3-203ENSMUST00000117269 Fam229bQ8CF36 80 aa11,94□□□□□ -0,5
Traf3-203ENSMUST00000117269 CnbpP53996 178 aaKnown RBP11,91□□□□□ -0,5
Traf3-203ENSMUST00000117269 Gm3880A0A1B0GSB3 72 aa11,9□□□□□ -0,5
Traf3-203ENSMUST00000117269 Gm9821Q8K076 103 aa11,9□□□□□ -0,5
Traf3-203ENSMUST00000117269 Abca12E9Q876 2595 aa11,9□□□□□ -0,5
Traf3-203ENSMUST00000117269 Unc79Q0KK59 2596 aa11,89□□□□□ -0,51
Traf3-203ENSMUST00000117269 Spink7Q6IE32 76 aa11,89□□□□□ -0,51
Traf3-203ENSMUST00000117269 CicQ924A2 2510 aa11,88□□□□□ -0,51
Traf3-203ENSMUST00000117269 Zcchc13Q9D548 170 aa11,88□□□□□ -0,51
Traf3-203ENSMUST00000117269 Gm7138L7N2C3 230 aa11,87□□□□□ -0,51
Traf3-203ENSMUST00000117269 Gm3238W4VSP7 230 aa11,87□□□□□ -0,51
Traf3-203ENSMUST00000117269 Usp9yF8VPU6 2556 aa11,86□□□□□ -0,51
Traf3-203ENSMUST00000117269 Smim29Q8R043 75 aa11,85□□□□□ -0,51
Traf3-203ENSMUST00000117269 Cypt14J3QPF7 87 aa11,81□□□□□ -0,52
Traf3-203ENSMUST00000117269 Gm9955Q8CEJ8 102 aa11,8□□□□□ -0,52
Traf3-203ENSMUST00000117269 6030445D17RikE9Q8F9 148 aa11,78□□□□□ -0,52
Traf3-203ENSMUST00000117269 Gm7137J3QMW1 236 aa11,76□□□□□ -0,53
Traf3-203ENSMUST00000117269 Gm4491E0CX42 125 aa11,75□□□□□ -0,53
Traf3-203ENSMUST00000117269 Nbeal1E9PYP2 2688 aa11,75□□□□□ -0,53
Traf3-203ENSMUST00000117269 NbdyA0A0N4SUI7 68 aa11,74□□□□□ -0,53
Traf3-203ENSMUST00000117269 Myo18bE9PV66 2605 aa11,74□□□□□ -0,53
Traf3-203ENSMUST00000117269 Ankrd17Q99NH0 2603 aaKnown RBP11,73□□□□□ -0,53
Traf3-203ENSMUST00000117269 FlnbQ80X90 2602 aaKnown RBP11,61□□□□□ -0,55
Traf3-203ENSMUST00000117269 Ankrd11E9Q4F7 2643 aa11,61□□□□□ -0,55
Traf3-203ENSMUST00000117269 Gm10065F6TJM2 114 aa11,61□□□□□ -0,55
Traf3-203ENSMUST00000117269 Zfp292Q9Z2U2 2698 aa11,61□□□□□ -0,55
Traf3-203ENSMUST00000117269 Krtap15-1Q9QZU5 150 aa11,6□□□□□ -0,55
Traf3-203ENSMUST00000117269 Lelp1Q9DAE3 120 aa11,57□□□□□ -0,56
Traf3-203ENSMUST00000117269 Gm10320E9PW43 113 aa11,56□□□□□ -0,56
Traf3-203ENSMUST00000117269 Gm9508A0A1W2P7W0 230 aa11,54□□□□□ -0,56
Traf3-203ENSMUST00000117269 Nsd1O88491 2588 aaKnown RBP11,54□□□□□ -0,56
Traf3-203ENSMUST00000117269 FasnP19096 2504 aaKnown RBP11,5□□□□□ -0,57
Traf3-203ENSMUST00000117269 Dmbt1Q60997 2085 aa11,5□□□□□ -0,57
Traf3-203ENSMUST00000117269 Camk2n1Q6QWF9 78 aa11,48□□□□□ -0,57
Traf3-203ENSMUST00000117269 Golgb1E9PVZ8 3238 aa11,46□□□□□ -0,57
Traf3-203ENSMUST00000117269 Odf3bQ5M8M2 238 aa11,46□□□□□ -0,58
Traf3-203ENSMUST00000117269 Usp24B1AY13 2617 aaKnown RBP11,45□□□□□ -0,58
Traf3-203ENSMUST00000117269 AtrQ9JKK8 2635 aa11,44□□□□□ -0,58
Traf3-203ENSMUST00000117269 Gm10139O88245 57 aa11,43□□□□□ -0,58
Traf3-203ENSMUST00000117269 Gm42715A0A087WP63 3095 aaKnown RBP11,41□□□□□ -0,58
Traf3-203ENSMUST00000117269 Fam229aB2KGE5 128 aa11,38□□□□□ -0,59
Traf3-203ENSMUST00000117269 Gm17349F7BGH6 99 aa11,34□□□□□ -0,59
Traf3-203ENSMUST00000117269 Cystm1Q8K353 104 aa11,33□□□□□ -0,6
Traf3-203ENSMUST00000117269 Gm37013Q8K491 104 aa11,33□□□□□ -0,6
Traf3-203ENSMUST00000117269 HrnrQ8VHD8 2496 aa11,28□□□□□ -0,6
Traf3-203ENSMUST00000117269 Sprr1aQ62266 144 aa11,28□□□□□ -0,6
Traf3-203ENSMUST00000117269 CenpfE9Q3P4 2997 aaKnown RBP11,25□□□□□ -0,61
Traf3-203ENSMUST00000117269 Gm36176A0A1W2P8D5 158 aa11,25□□□□□ -0,61
Traf3-203ENSMUST00000117269 PcntP48725 2898 aa11,24□□□□□ -0,61
Traf3-203ENSMUST00000117269 Fn1P11276 2477 aaKnown RBP11,23□□□□□ -0,61
Traf3-203ENSMUST00000117269 Gm16253D3Z167 63 aa11,21□□□□□ -0,61
Retrieved 100 of 22,080 RNA–protein pairs in 10,9 ms