RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Gm26661M0QWV4 156 aa9.72□□□□□ -0.85
Shroom3-202ENSMUST00000113054 Gm17689B3GLJ4 109 aa9.72□□□□□ -0.85
Shroom3-202ENSMUST00000113054 Usp9xP70398 2559 aaKnown RBP9.72□□□□□ -0.85
Shroom3-202ENSMUST00000113054 Plac8Q9JI48 112 aa9.71□□□□□ -0.85
Shroom3-202ENSMUST00000113054 Hcfc1Q61191 2045 aaKnown RBP9.69□□□□□ -0.86
Shroom3-202ENSMUST00000113054 Gm7138L7N2C3 230 aa9.68□□□□□ -0.86
Shroom3-202ENSMUST00000113054 Gm3238W4VSP7 230 aa9.68□□□□□ -0.86
Shroom3-202ENSMUST00000113054 Rnase13Q5GAM7 153 aa9.68□□□□□ -0.86
Shroom3-202ENSMUST00000113054 Mp68P56379 58 aa9.66□□□□□ -0.86
Shroom3-202ENSMUST00000113054 Limd2Q8BGB5 128 aa9.66□□□□□ -0.86
Shroom3-202ENSMUST00000113054 A530084C06RikQ3UTW2 186 aa9.65□□□□□ -0.86
Shroom3-202ENSMUST00000113054 Gm7137J3QMW1 236 aa9.65□□□□□ -0.86
Shroom3-202ENSMUST00000113054 SetxA2AKX3 2646 aa9.64□□□□□ -0.87
Shroom3-202ENSMUST00000113054 Defb9Q8R2I6 67 aa9.63□□□□□ -0.87
Shroom3-202ENSMUST00000113054 Bahcc1Q3UHR0 2643 aa9.63□□□□□ -0.87
Shroom3-202ENSMUST00000113054 Sprr4Q8CGN8 76 aa9.58□□□□□ -0.88
Shroom3-202ENSMUST00000113054 Pla2g10Q9QXX3 151 aa9.58□□□□□ -0.88
Shroom3-202ENSMUST00000113054 PolqQ8CGS6 2544 aa9.56□□□□□ -0.88
Shroom3-202ENSMUST00000113054 Epg5Q80TA9 2572 aa9.56□□□□□ -0.88
Shroom3-202ENSMUST00000113054 OxtP35454 125 aa9.55□□□□□ -0.88
Shroom3-202ENSMUST00000113054 Setd2E9Q5F9 2537 aa9.54□□□□□ -0.88
Shroom3-202ENSMUST00000113054 MtorQ9JLN9 2549 aa9.54□□□□□ -0.88
Shroom3-202ENSMUST00000113054 Coa5Q99M07 74 aa9.53□□□□□ -0.88
Shroom3-202ENSMUST00000113054 Smr3aQ61900 147 aa9.53□□□□□ -0.88
Shroom3-202ENSMUST00000113054 Krtap26-1Q9D7N2 215 aa9.51□□□□□ -0.89
Shroom3-202ENSMUST00000113054 CicQ924A2 2510 aa9.51□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Eif4ebp3Q80VV3 101 aa9.51□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Cdc42se1Q8BHL7 80 aa9.51□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Krtap16-1A2A5X5 502 aa9.49□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Sprr1bQ62267 153 aa9.49□□□□□ -0.89
Shroom3-202ENSMUST00000113054 A330070K13RikQ8CA53 115 aa9.49□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Lypd5Q9D7Z7 256 aa9.48□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Cypt15B1AXS0 87 aa9.48□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Gm10308Q9CVR5 141 aa9.48□□□□□ -0.89
Shroom3-202ENSMUST00000113054 AY074887Q8R5F9 132 aa9.47□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Cep192E9Q4Y4 2514 aaKnown RBP9.46□□□□□ -0.89
Shroom3-202ENSMUST00000113054 C530025M09RikF6RGA8 229 aa9.46□□□□□ -0.89
Shroom3-202ENSMUST00000113054 Psors1c2Q80ZC9 134 aa9.45□□□□□ -0.9
Shroom3-202ENSMUST00000113054 Golgb1E9PVZ8 3238 aa9.41□□□□□ -0.9
Shroom3-202ENSMUST00000113054 Usp9yF8VPU6 2556 aa9.38□□□□□ -0.91
Shroom3-202ENSMUST00000113054 Gm20538F6Z9R1 75 aa9.37□□□□□ -0.91
Shroom3-202ENSMUST00000113054 AW011738F6S7Q2 159 aa9.36□□□□□ -0.91
Shroom3-202ENSMUST00000113054 Lelp1Q9DAE3 120 aa9.35□□□□□ -0.91
Shroom3-202ENSMUST00000113054 Abca12E9Q876 2595 aa9.35□□□□□ -0.91
Shroom3-202ENSMUST00000113054 Gm9821Q8K076 103 aa9.34□□□□□ -0.91
Shroom3-202ENSMUST00000113054 Spink7Q6IE32 76 aa9.34□□□□□ -0.91
Shroom3-202ENSMUST00000113054 Gm26620Q9CY65 116 aa9.33□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Gm9508A0A1W2P7W0 230 aa9.32□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Smim29Q8R043 75 aa9.32□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Gm42715A0A087WP63 3095 aaKnown RBP9.32□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Prr13Q9CQJ5 137 aa9.32□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Unc79Q0KK59 2596 aa9.32□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Chtf8P0CG14 533 aa9.3□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Ankrd17Q99NH0 2603 aaKnown RBP9.29□□□□□ -0.92
Shroom3-202ENSMUST00000113054 Gm7276Q3TYW4 209 aa9.27□□□□□ -0.93
Shroom3-202ENSMUST00000113054 UtrnE9Q6R7 3430 aa9.27□□□□□ -0.93
Shroom3-202ENSMUST00000113054 Rps28P62858 69 aaKnown RBP9.26□□□□□ -0.93
Shroom3-202ENSMUST00000113054 2310034C09RikQ9D746 214 aa9.26□□□□□ -0.93
Shroom3-202ENSMUST00000113054 Jbts17Q8CE72 3214 aa9.25□□□□□ -0.93
Shroom3-202ENSMUST00000113054 Phxr4P15974 95 aa9.24□□□□□ -0.93
Shroom3-202ENSMUST00000113054 CnbpP53996 178 aaKnown RBP9.22□□□□□ -0.93
Shroom3-202ENSMUST00000113054 Fam104aA2A6P4 185 aa9.22□□□□□ -0.93
Shroom3-202ENSMUST00000113054 Zfp292Q9Z2U2 2698 aa9.22□□□□□ -0.93
Shroom3-202ENSMUST00000113054 Uqcr11Q9CPX8 56 aa9.21□□□□□ -0.93
Shroom3-202ENSMUST00000113054 Gm11213A0A1B0GR83 88 aa9.21□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Gm3880A0A1B0GSB3 72 aa9.21□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Fam229bQ8CF36 80 aa9.21□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Krtap15-1Q9QZU5 150 aa9.2□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Nbeal1E9PYP2 2688 aa9.2□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Nsd1O88491 2588 aaKnown RBP9.19□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Gm36176A0A1W2P8D5 158 aa9.19□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Zcchc13Q9D548 170 aa9.19□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Gm21798J3QNU5 87 aa9.18□□□□□ -0.94
Shroom3-202ENSMUST00000113054 CriptO70333 101 aa9.17□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Ep400Q8CHI8 3072 aaKnown RBP9.16□□□□□ -0.94
Shroom3-202ENSMUST00000113054 NbdyA0A0N4SUI7 68 aa9.15□□□□□ -0.94
Shroom3-202ENSMUST00000113054 Dmbt1Q60997 2085 aa9.15□□□□□ -0.95
Shroom3-202ENSMUST00000113054 Gm4491E0CX42 125 aa9.15□□□□□ -0.95
Shroom3-202ENSMUST00000113054 Usp24B1AY13 2617 aaKnown RBP9.13□□□□□ -0.95
Shroom3-202ENSMUST00000113054 Gm17349F7BGH6 99 aa9.13□□□□□ -0.95
Shroom3-202ENSMUST00000113054 6030445D17RikE9Q8F9 148 aa9.13□□□□□ -0.95
Shroom3-202ENSMUST00000113054 Cypt14J3QPF7 87 aa9.12□□□□□ -0.95
Shroom3-202ENSMUST00000113054 Dnah12Q3V0Q1 3086 aa9.12□□□□□ -0.95
Shroom3-202ENSMUST00000113054 Myo18bE9PV66 2605 aa9.08□□□□□ -0.96
Shroom3-202ENSMUST00000113054 Prune2Q52KR3 3084 aa9.07□□□□□ -0.96
Shroom3-202ENSMUST00000113054 AtrQ9JKK8 2635 aa9.06□□□□□ -0.96
Shroom3-202ENSMUST00000113054 CenpfE9Q3P4 2997 aaKnown RBP9.05□□□□□ -0.96
Shroom3-202ENSMUST00000113054 Ankrd11E9Q4F7 2643 aa9.04□□□□□ -0.96
Shroom3-202ENSMUST00000113054 FlnbQ80X90 2602 aaKnown RBP9.02□□□□□ -0.97
Shroom3-202ENSMUST00000113054 Gm9955Q8CEJ8 102 aa9.01□□□□□ -0.97
Shroom3-202ENSMUST00000113054 Lama3Q61789 3330 aa9□□□□□ -0.97
Shroom3-202ENSMUST00000113054 Gm10065F6TJM2 114 aa9□□□□□ -0.97
Shroom3-202ENSMUST00000113054 FasnP19096 2504 aaKnown RBP8.97□□□□□ -0.97
Shroom3-202ENSMUST00000113054 Gm10320E9PW43 113 aa8.97□□□□□ -0.97
Shroom3-202ENSMUST00000113054 TrioQ0KL02 3102 aa8.96□□□□□ -0.98
Shroom3-202ENSMUST00000113054 PcntP48725 2898 aa8.94□□□□□ -0.98
Shroom3-202ENSMUST00000113054 Bod1lE9Q6J5 3032 aa8.92□□□□□ -0.98
Shroom3-202ENSMUST00000113054 Fam229aB2KGE5 128 aa8.92□□□□□ -0.98
Shroom3-202ENSMUST00000113054 Gm9507D3Z5T3 223 aa8.91□□□□□ -0.98
Shroom3-202ENSMUST00000113054 Camk2n1Q6QWF9 78 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms