RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Spint4Q9D263 159 aa10.13□□□□□ -0.79
Ccdc50-203ENSMUST00000100026 Usp9xP70398 2559 aaKnown RBP10.12□□□□□ -0.79
Ccdc50-203ENSMUST00000100026 Krtap26-1Q9D7N2 215 aa10.1□□□□□ -0.79
Ccdc50-203ENSMUST00000100026 Plac8Q9JI48 112 aa10.1□□□□□ -0.79
Ccdc50-203ENSMUST00000100026 7530416G11RikJ3QJX6 159 aa10.08□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 SetxA2AKX3 2646 aa10.08□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Defb9Q8R2I6 67 aa10.07□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Rnase13Q5GAM7 153 aa10.06□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Sprr4Q8CGN8 76 aa10.06□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Smr3aQ61900 147 aa10.05□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Mp68P56379 58 aa10.04□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Pla2g10Q9QXX3 151 aa10.03□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 SrcapA0A087WQ44 3271 aa10.02□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Anapc11Q9CPX9 84 aa10.02□□□□□ -0.8
Ccdc50-203ENSMUST00000100026 Hcfc1Q61191 2045 aaKnown RBP10□□□□□ -0.81
Ccdc50-203ENSMUST00000100026 Gm20538F6Z9R1 75 aa10□□□□□ -0.81
Ccdc50-203ENSMUST00000100026 Epg5Q80TA9 2572 aa9.99□□□□□ -0.81
Ccdc50-203ENSMUST00000100026 A330070K13RikQ8CA53 115 aa9.97□□□□□ -0.81
Ccdc50-203ENSMUST00000100026 AI854703Q8BIN3 203 aa9.96□□□□□ -0.81
Ccdc50-203ENSMUST00000100026 Gm7138L7N2C3 230 aa9.96□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Gm3238W4VSP7 230 aa9.96□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Cypt15B1AXS0 87 aa9.94□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Sprr1bQ62267 153 aa9.94□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Gm9821Q8K076 103 aa9.93□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Bahcc1Q3UHR0 2643 aa9.93□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Setd2E9Q5F9 2537 aa9.93□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Phxr5P08399 672 aa9.92□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Lypd5Q9D7Z7 256 aa9.92□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 MtorQ9JLN9 2549 aa9.91□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 AY074887Q8R5F9 132 aa9.9□□□□□ -0.82
Ccdc50-203ENSMUST00000100026 Gm7137J3QMW1 236 aa9.88□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 Gm26620Q9CY65 116 aa9.88□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 Gm10308Q9CVR5 141 aa9.88□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 CicQ924A2 2510 aa9.87□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 A530084C06RikQ3UTW2 186 aa9.87□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 Cdc42se1Q8BHL7 80 aa9.84□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 Krtap16-1A2A5X5 502 aa9.84□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 Coa5Q99M07 74 aa9.84□□□□□ -0.83
Ccdc50-203ENSMUST00000100026 Gm11213A0A1B0GR83 88 aa9.83□□□□□ -0.84
Ccdc50-203ENSMUST00000100026 PolqQ8CGS6 2544 aa9.83□□□□□ -0.84
Ccdc50-203ENSMUST00000100026 Cep192E9Q4Y4 2514 aaKnown RBP9.81□□□□□ -0.84
Ccdc50-203ENSMUST00000100026 C530025M09RikF6RGA8 229 aa9.81□□□□□ -0.84
Ccdc50-203ENSMUST00000100026 CnbpP53996 178 aaKnown RBP9.8□□□□□ -0.84
Ccdc50-203ENSMUST00000100026 Ankrd17Q99NH0 2603 aaKnown RBP9.79□□□□□ -0.84
Ccdc50-203ENSMUST00000100026 Gm7276Q3TYW4 209 aa9.77□□□□□ -0.84
Ccdc50-203ENSMUST00000100026 Spink7Q6IE32 76 aa9.76□□□□□ -0.85
Ccdc50-203ENSMUST00000100026 Unc79Q0KK59 2596 aa9.75□□□□□ -0.85
Ccdc50-203ENSMUST00000100026 Zcchc13Q9D548 170 aa9.73□□□□□ -0.85
Ccdc50-203ENSMUST00000100026 Abca12E9Q876 2595 aa9.73□□□□□ -0.85
Ccdc50-203ENSMUST00000100026 Usp9yF8VPU6 2556 aa9.73□□□□□ -0.85
Ccdc50-203ENSMUST00000100026 Fam104aA2A6P4 185 aa9.72□□□□□ -0.85
Ccdc50-203ENSMUST00000100026 Eif4ebp3Q80VV3 101 aa9.72□□□□□ -0.85
Ccdc50-203ENSMUST00000100026 NbdyA0A0N4SUI7 68 aa9.68□□□□□ -0.86
Ccdc50-203ENSMUST00000100026 Uqcr11Q9CPX8 56 aa9.66□□□□□ -0.86
Ccdc50-203ENSMUST00000100026 Lelp1Q9DAE3 120 aa9.64□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 Cypt14J3QPF7 87 aa9.64□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 2310034C09RikQ9D746 214 aa9.63□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 Rps28P62858 69 aaKnown RBP9.61□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 Krtap15-1Q9QZU5 150 aa9.6□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 Gm17349F7BGH6 99 aa9.59□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 Gm10065F6TJM2 114 aa9.59□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 Chtf8P0CG14 533 aa9.59□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 Phxr4P15974 95 aa9.59□□□□□ -0.87
Ccdc50-203ENSMUST00000100026 CriptO70333 101 aa9.58□□□□□ -0.88
Ccdc50-203ENSMUST00000100026 Gm21798J3QNU5 87 aa9.58□□□□□ -0.88
Ccdc50-203ENSMUST00000100026 Smim29Q8R043 75 aa9.56□□□□□ -0.88
Ccdc50-203ENSMUST00000100026 Gm4491E0CX42 125 aa9.54□□□□□ -0.88
Ccdc50-203ENSMUST00000100026 Fam229aB2KGE5 128 aa9.52□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 Gm36176A0A1W2P8D5 158 aa9.51□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 Gm9508A0A1W2P7W0 230 aa9.49□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 Zfp292Q9Z2U2 2698 aa9.49□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 Nsd1O88491 2588 aaKnown RBP9.48□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 Gm9955Q8CEJ8 102 aa9.47□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 Dmbt1Q60997 2085 aa9.46□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 Ankrd11E9Q4F7 2643 aa9.46□□□□□ -0.89
Ccdc50-203ENSMUST00000100026 FlnbQ80X90 2602 aaKnown RBP9.46□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 Gm11565A2A4M7 156 aa9.46□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 6030445D17RikE9Q8F9 148 aa9.45□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 Usp24B1AY13 2617 aaKnown RBP9.43□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 Gm3880A0A1B0GSB3 72 aa9.43□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 AtrQ9JKK8 2635 aa9.43□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 Myo18bE9PV66 2605 aa9.43□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 FasnP19096 2504 aaKnown RBP9.42□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 Nbeal1E9PYP2 2688 aa9.41□□□□□ -0.9
Ccdc50-203ENSMUST00000100026 Prr13Q9CQJ5 137 aa9.39□□□□□ -0.91
Ccdc50-203ENSMUST00000100026 Gm10320E9PW43 113 aa9.38□□□□□ -0.91
Ccdc50-203ENSMUST00000100026 Sec61bQ9CQS8 96 aaKnown RBP9.38□□□□□ -0.91
Ccdc50-203ENSMUST00000100026 Camk2n1Q6QWF9 78 aa9.35□□□□□ -0.91
Ccdc50-203ENSMUST00000100026 Odf3bQ5M8M2 238 aa9.34□□□□□ -0.91
Ccdc50-203ENSMUST00000100026 Fam229bQ8CF36 80 aa9.34□□□□□ -0.91
Ccdc50-203ENSMUST00000100026 Gm10643Q3URG9 111 aa9.32□□□□□ -0.92
Ccdc50-203ENSMUST00000100026 Gm10139O88245 57 aa9.27□□□□□ -0.93
Ccdc50-203ENSMUST00000100026 FlnaQ8BTM8 2647 aaKnown RBP9.25□□□□□ -0.93
Ccdc50-203ENSMUST00000100026 Gm5767A0A0J9YTU8 78 aa9.2□□□□□ -0.94
Ccdc50-203ENSMUST00000100026 CenpfE9Q3P4 2997 aaKnown RBP9.2□□□□□ -0.94
Ccdc50-203ENSMUST00000100026 Gm42715A0A087WP63 3095 aaKnown RBP9.2□□□□□ -0.94
Ccdc50-203ENSMUST00000100026 Sprr1aQ62266 144 aa9.2□□□□□ -0.94
Ccdc50-203ENSMUST00000100026 Gm9195A0A140LHT4 2805 aa9.17□□□□□ -0.94
Ccdc50-203ENSMUST00000100026 Gm9507D3Z5T3 223 aa9.17□□□□□ -0.94
Ccdc50-203ENSMUST00000100026 Fn1P11276 2477 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms