RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 P01819 144 aa8.09□□□□□ -1.11
Lig3-202ENSMUST00000080461 Trav14d-3-dv8A0A075B619 120 aa8.09□□□□□ -1.12
Lig3-202ENSMUST00000080461 Defb37Q7TMD2 62 aa8.09□□□□□ -1.12
Lig3-202ENSMUST00000080461 Fam168bQ80XQ8 194 aa8.08□□□□□ -1.12
Lig3-202ENSMUST00000080461 Igkv3-12A0A140T8P0 119 aa8.07□□□□□ -1.12
Lig3-202ENSMUST00000080461 CnbpP53996 178 aaKnown RBP8.07□□□□□ -1.12
Lig3-202ENSMUST00000080461 Sprr1aQ62266 144 aa8.07□□□□□ -1.12
Lig3-202ENSMUST00000080461 Fras1Q80T14 4010 aa8.07□□□□□ -1.12
Lig3-202ENSMUST00000080461 PrkdcP97313 4128 aa8.07□□□□□ -1.12
Lig3-202ENSMUST00000080461 BB014433Q8C5R5 389 aa8.06□□□□□ -1.12
Lig3-202ENSMUST00000080461 Cd164Q9R0L9 197 aa8.06□□□□□ -1.12
Lig3-202ENSMUST00000080461 Trav3-4A0A075B654 114 aa8.06□□□□□ -1.12
Lig3-202ENSMUST00000080461 4930535I16RikQ9CUI2 172 aa8.06□□□□□ -1.12
Lig3-202ENSMUST00000080461 2310034G01RikA0A286YDL3 209 aa8.05□□□□□ -1.12
Lig3-202ENSMUST00000080461 Q9DAA7 145 aa8.05□□□□□ -1.12
Lig3-202ENSMUST00000080461 Msrb1Q9JLC3 116 aa8.05□□□□□ -1.12
Lig3-202ENSMUST00000080461 Gm9918Q8BUR5 174 aa8.04□□□□□ -1.12
Lig3-202ENSMUST00000080461 4930519P11RikQ9CUJ8 166 aa8.04□□□□□ -1.12
Lig3-202ENSMUST00000080461 Ifitm6A0A1B0GS75 124 aa8.03□□□□□ -1.12
Lig3-202ENSMUST00000080461 BaalcQ8VHV1 145 aa8.03□□□□□ -1.12
Lig3-202ENSMUST00000080461 Cdk2ap2Q9CPY4 127 aa8.03□□□□□ -1.12
Lig3-202ENSMUST00000080461 Gm10735Q3US96 136 aa8.02□□□□□ -1.13
Lig3-202ENSMUST00000080461 Igkv3-2A0A075B5P0 119 aa8.02□□□□□ -1.13
Lig3-202ENSMUST00000080461 Gm11627A6PWP4 55 aa8.02□□□□□ -1.13
Lig3-202ENSMUST00000080461 Igkv1-122A0A140T8M9 119 aa8.01□□□□□ -1.13
Lig3-202ENSMUST00000080461 Mrpl52Q9D0Y8 121 aa8.01□□□□□ -1.13
Lig3-202ENSMUST00000080461 Acyp1P56376 99 aa8.01□□□□□ -1.13
Lig3-202ENSMUST00000080461 Defb40Q70KL2 73 aa8.01□□□□□ -1.13
Lig3-202ENSMUST00000080461 Anapc13Q8R034 74 aa8□□□□□ -1.13
Lig3-202ENSMUST00000080461 Gm10770F7D043 238 aa8□□□□□ -1.13
Lig3-202ENSMUST00000080461 PlecQ9QXS1 4691 aaKnown RBP7.99□□□□□ -1.13
Lig3-202ENSMUST00000080461 Xcl1P47993 114 aa7.99□□□□□ -1.13
Lig3-202ENSMUST00000080461 Defa23Q5G866 93 aa7.99□□□□□ -1.13
Lig3-202ENSMUST00000080461 Fam19a5Q91WE9 132 aa7.99□□□□□ -1.13
Lig3-202ENSMUST00000080461 Dnah11E9Q7N9 4488 aa7.98□□□□□ -1.13
Lig3-202ENSMUST00000080461 Pou2af1Q64693 256 aa7.98□□□□□ -1.13
Lig3-202ENSMUST00000080461 Ighv10-1A0A0B4J1J6 119 aa7.97□□□□□ -1.13
Lig3-202ENSMUST00000080461 Lamtor3O88653 124 aa7.97□□□□□ -1.13
Lig3-202ENSMUST00000080461 Wfdc6bF6ULY1 148 aa7.96□□□□□ -1.14
Lig3-202ENSMUST00000080461 Nupr2Q497P3 102 aa7.96□□□□□ -1.14
Lig3-202ENSMUST00000080461 A0A286YE02 88 aa7.95□□□□□ -1.14
Lig3-202ENSMUST00000080461 Igkv8-27A0A0G2JF28 120 aa7.95□□□□□ -1.14
Lig3-202ENSMUST00000080461 Igkv8-30A0A140T8M3 121 aa7.95□□□□□ -1.14
Lig3-202ENSMUST00000080461 Defa27F2Z403 93 aa7.95□□□□□ -1.14
Lig3-202ENSMUST00000080461 BC048502Q80Y74 154 aa7.95□□□□□ -1.14
Lig3-202ENSMUST00000080461 Gm10837Q3UTT8 145 aa7.94□□□□□ -1.14
Lig3-202ENSMUST00000080461 P84750 121 aa7.94□□□□□ -1.14
Lig3-202ENSMUST00000080461 ScxQ64124 207 aa7.94□□□□□ -1.14
Lig3-202ENSMUST00000080461 Prol1E9PYQ4 312 aa7.93□□□□□ -1.14
Lig3-202ENSMUST00000080461 Tmem213Q08EA8 116 aa7.93□□□□□ -1.14
Lig3-202ENSMUST00000080461 Fam19a1Q7TPG8 133 aa7.93□□□□□ -1.14
Lig3-202ENSMUST00000080461 Plac8Q9JI48 112 aa7.93□□□□□ -1.14
Lig3-202ENSMUST00000080461 Pcp4P63054 62 aa7.93□□□□□ -1.14
Lig3-202ENSMUST00000080461 Igkv8-26A0A075B5N5 123 aa7.92□□□□□ -1.14
Lig3-202ENSMUST00000080461 9530003J23RikQ8BM26 151 aa7.92□□□□□ -1.14
Lig3-202ENSMUST00000080461 Obox2E9PXV9 151 aa7.92□□□□□ -1.14
Lig3-202ENSMUST00000080461 2310050C09RikG5E8Z3 280 aa7.92□□□□□ -1.14
Lig3-202ENSMUST00000080461 Elof1P60003 83 aa7.92□□□□□ -1.14
Lig3-202ENSMUST00000080461 Dnah9B1AR51 4484 aa7.92□□□□□ -1.14
Lig3-202ENSMUST00000080461 MplkipQ9D011 178 aa7.92□□□□□ -1.14
Lig3-202ENSMUST00000080461 Ly6g6cQ9Z1Q4 126 aa7.91□□□□□ -1.14
Lig3-202ENSMUST00000080461 Ighv10-3A0A075B5T6 119 aa7.9□□□□□ -1.14
Lig3-202ENSMUST00000080461 Dmac1Q9CQ00 111 aa7.9□□□□□ -1.14
Lig3-202ENSMUST00000080461 Gm7276Q3TYW4 209 aa7.89□□□□□ -1.15
Lig3-202ENSMUST00000080461 Ntn5Q3UQ22 452 aa7.89□□□□□ -1.15
Lig3-202ENSMUST00000080461 SycnQ8VCK7 134 aa7.89□□□□□ -1.15
Lig3-202ENSMUST00000080461 Tmem243B2RVB9 118 aa7.88□□□□□ -1.15
Lig3-202ENSMUST00000080461 Znf414Q9DCK4 299 aa7.88□□□□□ -1.15
Lig3-202ENSMUST00000080461 Defa7P50705 93 aa7.87□□□□□ -1.15
Lig3-202ENSMUST00000080461 Krtap10-4Q08EG8 221 aa7.87□□□□□ -1.15
Lig3-202ENSMUST00000080461 Zcchc13Q9D548 170 aa7.87□□□□□ -1.15
Lig3-202ENSMUST00000080461 Atp5eP56382 52 aa7.86□□□□□ -1.15
Lig3-202ENSMUST00000080461 PscaP57096 123 aa7.86□□□□□ -1.15
Lig3-202ENSMUST00000080461 Defa28D3Z1V9 94 aa7.86□□□□□ -1.15
Lig3-202ENSMUST00000080461 A730071L15RikQ8C4X0 137 aa7.86□□□□□ -1.15
Lig3-202ENSMUST00000080461 Dnah7aE9Q0T8 4024 aa7.86□□□□□ -1.15
Lig3-202ENSMUST00000080461 Igkv8-21A0A140T8P7 120 aa7.84□□□□□ -1.15
Lig3-202ENSMUST00000080461 PkigO70139 76 aa7.84□□□□□ -1.15
Lig3-202ENSMUST00000080461 Wfdc13Q5DQQ6 81 aa7.84□□□□□ -1.15
Lig3-202ENSMUST00000080461 Cystm1Q8K353 104 aa7.84□□□□□ -1.15
Lig3-202ENSMUST00000080461 1700012A03RikQ9DAF1 130 aa7.84□□□□□ -1.15
Lig3-202ENSMUST00000080461 U90926O08546 118 aa7.83□□□□□ -1.16
Lig3-202ENSMUST00000080461 Phf5aP83870 110 aaKnown RBP7.83□□□□□ -1.16
Lig3-202ENSMUST00000080461 Gm11011D3Z3L9 86 aa7.83□□□□□ -1.16
Lig3-202ENSMUST00000080461 Igf1P05017 153 aa7.83□□□□□ -1.16
Lig3-202ENSMUST00000080461 Ube2bP63147 152 aa7.82□□□□□ -1.16
Lig3-202ENSMUST00000080461 Ormdl1Q921I0 153 aa7.82□□□□□ -1.16
Lig3-202ENSMUST00000080461 Igkv8-28A0A0G2JE47 121 aa7.82□□□□□ -1.16
Lig3-202ENSMUST00000080461 Hist1h4aP62806 103 aaKnown RBP7.82□□□□□ -1.16
Lig3-202ENSMUST00000080461 Gm10065F6TJM2 114 aa7.81□□□□□ -1.16
Lig3-202ENSMUST00000080461 Rbm3O89086 153 aaKnown RBP7.81□□□□□ -1.16
Lig3-202ENSMUST00000080461 Vpreb2P13373 142 aa7.81□□□□□ -1.16
Lig3-202ENSMUST00000080461 Dnah5Q8VHE6 4621 aa7.81□□□□□ -1.16
Lig3-202ENSMUST00000080461 Fam104aA2A6P4 185 aa7.8□□□□□ -1.16
Lig3-202ENSMUST00000080461 OxtP35454 125 aa7.8□□□□□ -1.16
Lig3-202ENSMUST00000080461 Gm17689B3GLJ4 109 aa7.8□□□□□ -1.16
Lig3-202ENSMUST00000080461 Prr13Q9CQJ5 137 aa7.8□□□□□ -1.16
Lig3-202ENSMUST00000080461 Dnah7cA0A087WR13 4024 aa7.8□□□□□ -1.16
Lig3-202ENSMUST00000080461 Ighv2-2A0A075B5P8 116 aa7.79□□□□□ -1.16
Lig3-202ENSMUST00000080461 Ighv2-5A0A0A6YY69 116 aa7.79□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 98.6 ms