RNA–Protein interactions for RNA: ENSMUST00000055949.3

Pcdhb18-201, Transcript of Protocadherin beta-18, mousemouse

APPRIS P1 BASIC

Gene Pcdhb18, Length 5,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18-201ENSMUST00000055949 Gm20538F6Z9R1 75 aa8.7□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 Rps28P62858 69 aaKnown RBP8.69□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 FasnP19096 2504 aaKnown RBP8.69□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 Gm10197F6QEY5 67 aa8.69□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 Sostdc1Q9CQN4 206 aa8.67□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 CicQ924A2 2510 aa8.66□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 Krtap16-1A2A5X5 502 aa8.66□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 Gm44790A0A0N4SV91 103 aa8.65□□□□□ -1.02
Pcdhb18-201ENSMUST00000055949 AI854703Q8BIN3 203 aa8.64□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 AplnQ9R0R4 77 aa8.62□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Gm10772F7AIG4 85 aa8.62□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Myo18bE9PV66 2605 aa8.61□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Gm11213A0A1B0GR83 88 aa8.61□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 A530084C06RikQ3UTW2 186 aa8.6□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Gm5617Q91VN2 117 aa8.6□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Q8BT88 171 aa8.6□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Abca12E9Q876 2595 aa8.59□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Sprr4Q8CGN8 76 aa8.59□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 Mp68P56379 58 aa8.59□□□□□ -1.03
Pcdhb18-201ENSMUST00000055949 FlnbQ80X90 2602 aaKnown RBP8.58□□□□□ -1.04
Pcdhb18-201ENSMUST00000055949 Gm10770F7D043 238 aa8.57□□□□□ -1.04
Pcdhb18-201ENSMUST00000055949 Prr13Q9CQJ5 137 aa8.57□□□□□ -1.04
Pcdhb18-201ENSMUST00000055949 Hcfc1Q61191 2045 aaKnown RBP8.55□□□□□ -1.04
Pcdhb18-201ENSMUST00000055949 Gm20661K7N787 53 aa8.53□□□□□ -1.04
Pcdhb18-201ENSMUST00000055949 Gm10308Q9CVR5 141 aa8.52□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 Gm3250E9Q1M3 230 aa8.52□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 7530416G11RikJ3QJX6 159 aa8.52□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 Cypt15B1AXS0 87 aa8.5□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 Gm26620Q9CY65 116 aa8.5□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 Sprr1bQ62267 153 aa8.49□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 AY074887Q8R5F9 132 aa8.47□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 Rnase13Q5GAM7 153 aa8.46□□□□□ -1.05
Pcdhb18-201ENSMUST00000055949 CnbpP53996 178 aaKnown RBP8.46□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Ankrd17Q99NH0 2603 aaKnown RBP8.46□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Gm7276Q3TYW4 209 aa8.46□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Fam168bQ80XQ8 194 aa8.46□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Cep192E9Q4Y4 2514 aaKnown RBP8.44□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Krtap11-1E9Q2E9 183 aa8.43□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Cdc42se1Q8BHL7 80 aa8.42□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Gm9821Q8K076 103 aa8.42□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Uqcr11Q9CPX8 56 aa8.41□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Eif4ebp3Q80VV3 101 aa8.41□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 Defb9Q8R2I6 67 aa8.41□□□□□ -1.06
Pcdhb18-201ENSMUST00000055949 A330070K13RikQ8CA53 115 aa8.39□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Lypd5Q9D7Z7 256 aa8.39□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Defb1P56386 69 aa8.38□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Coa5Q99M07 74 aa8.37□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Zcchc13Q9D548 170 aa8.37□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Fn1P11276 2477 aaKnown RBP8.37□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Gm11565A2A4M7 156 aa8.36□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Pla2g10Q9QXX3 151 aa8.34□□□□□ -1.07
Pcdhb18-201ENSMUST00000055949 Fam104aA2A6P4 185 aa8.33□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 AtrQ9JKK8 2635 aa8.32□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 Nbeal1E9PYP2 2688 aa8.31□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 Phxr4P15974 95 aa8.31□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 Gm10065F6TJM2 114 aa8.3□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 Plac8Q9JI48 112 aa8.29□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 Usp24B1AY13 2617 aaKnown RBP8.29□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 Cypt14J3QPF7 87 aa8.28□□□□□ -1.08
Pcdhb18-201ENSMUST00000055949 NbdyA0A0N4SUI7 68 aa8.27□□□□□ -1.09
Pcdhb18-201ENSMUST00000055949 Gm10643Q3URG9 111 aa8.24□□□□□ -1.09
Pcdhb18-201ENSMUST00000055949 Phxr5P08399 672 aa8.22□□□□□ -1.09
Pcdhb18-201ENSMUST00000055949 CriptO70333 101 aa8.21□□□□□ -1.09
Pcdhb18-201ENSMUST00000055949 C530025M09RikF6RGA8 229 aa8.21□□□□□ -1.1
Pcdhb18-201ENSMUST00000055949 Anapc11Q9CPX9 84 aa8.19□□□□□ -1.1
Pcdhb18-201ENSMUST00000055949 Gm21798J3QNU5 87 aa8.18□□□□□ -1.1
Pcdhb18-201ENSMUST00000055949 2310034C09RikQ9D746 214 aa8.16□□□□□ -1.1
Pcdhb18-201ENSMUST00000055949 Zfp292Q9Z2U2 2698 aa8.14□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Gm9955Q8CEJ8 102 aa8.13□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Fam229aB2KGE5 128 aa8.13□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Spink7Q6IE32 76 aa8.13□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Chtf8P0CG14 533 aa8.13□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Odf3bQ5M8M2 238 aa8.12□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Fam229bQ8CF36 80 aa8.11□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Golgb1E9PVZ8 3238 aa8.11□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 CenpfE9Q3P4 2997 aaKnown RBP8.1□□□□□ -1.11
Pcdhb18-201ENSMUST00000055949 Sec61bQ9CQS8 96 aaKnown RBP8.08□□□□□ -1.12
Pcdhb18-201ENSMUST00000055949 Nsd1O88491 2588 aaKnown RBP8.08□□□□□ -1.12
Pcdhb18-201ENSMUST00000055949 Gm3233E9Q2H5 230 aa8.08□□□□□ -1.12
Pcdhb18-201ENSMUST00000055949 Gm10320E9PW43 113 aa8.04□□□□□ -1.12
Pcdhb18-201ENSMUST00000055949 FlnaQ8BTM8 2647 aaKnown RBP8.03□□□□□ -1.12
Pcdhb18-201ENSMUST00000055949 PcntP48725 2898 aa8.02□□□□□ -1.13
Pcdhb18-201ENSMUST00000055949 Gm4491E0CX42 125 aa7.99□□□□□ -1.13
Pcdhb18-201ENSMUST00000055949 Gcn1E9PVA8 2671 aaKnown RBP7.99□□□□□ -1.13
Pcdhb18-201ENSMUST00000055949 Kmt2bO08550 2713 aa7.99□□□□□ -1.13
Pcdhb18-201ENSMUST00000055949 Mast4Q811L6 2618 aa7.97□□□□□ -1.13
Pcdhb18-201ENSMUST00000055949 Dmbt1Q60997 2085 aa7.96□□□□□ -1.13
Pcdhb18-201ENSMUST00000055949 Notch1Q01705 2531 aa7.96□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Gm42715A0A087WP63 3095 aaKnown RBP7.94□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Hectd1Q69ZR2 2618 aaKnown RBP7.93□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Gm7138L7N2C3 230 aa7.92□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Gm3238W4VSP7 230 aa7.92□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Krtap15-1Q9QZU5 150 aa7.92□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 6030445D17RikE9Q8F9 148 aa7.91□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Gm10139O88245 57 aa7.9□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Camk2n1Q6QWF9 78 aa7.9□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Smim29Q8R043 75 aa7.9□□□□□ -1.14
Pcdhb18-201ENSMUST00000055949 Akap13E9Q394 2776 aa7.9□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 UtrnE9Q6R7 3430 aa7.89□□□□□ -1.15
Pcdhb18-201ENSMUST00000055949 Stab1Q8R4Y4 2571 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms