RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 P06320 134 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Sslp1Q3UN54 99 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Cmc4Q61908 68 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 A830005F24RikQ8BRT5 167 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 A530084C06RikQ3UTW2 186 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Cd164Q9R0L9 197 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 D730001G18RikA0A087WQU7 115 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Serp1Q9Z1W5 66 aa7.75□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Defb2P82020 71 aa7.74□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Gm10320E9PW43 113 aa7.74□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Gm10337F7DEP7 55 aa7.73□□□□□ -1.17
Topbp1-201ENSMUST00000035164 E130208F15RikQ3UPV3 143 aa7.73□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Dph3Q8K0W9 82 aa7.73□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Ube2bP63147 152 aa7.73□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Hivep1Q03172 2688 aa7.73□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Tenm3Q9WTS6 2715 aa7.72□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Gm10308Q9CVR5 141 aa7.72□□□□□ -1.17
Topbp1-201ENSMUST00000035164 ApcQ61315 2845 aa7.72□□□□□ -1.17
Topbp1-201ENSMUST00000035164 C530025M09RikF6RGA8 229 aa7.72□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Gm17521F6QAC8 156 aa7.72□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Gm10570F6VB42 170 aa7.72□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Pdzd2E9Q1M1 2796 aa7.72□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Csmd2V9GX34 3611 aa7.71□□□□□ -1.17
Topbp1-201ENSMUST00000035164 Gm37389A0A0A6YW05 95 aa7.71□□□□□ -1.18
Topbp1-201ENSMUST00000035164 6430550D23RikE9Q1X6 194 aa7.71□□□□□ -1.18
Topbp1-201ENSMUST00000035164 P01819 144 aa7.7□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Gm5617Q91VN2 117 aa7.7□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Gm3233E9Q2H5 230 aa7.7□□□□□ -1.18
Topbp1-201ENSMUST00000035164 2310034G01RikA0A286YDL3 209 aa7.69□□□□□ -1.18
Topbp1-201ENSMUST00000035164 CrygfQ9CXV3 174 aa7.68□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Wfdc13Q5DQQ6 81 aa7.68□□□□□ -1.18
Topbp1-201ENSMUST00000035164 A730009L09RikA0A1B0GS82 72 aa7.67□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Igkv1-110A0A0B4J1I0 119 aa7.67□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Gm10401E9Q3K6 71 aa7.67□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Gm10770F7D043 238 aa7.67□□□□□ -1.18
Topbp1-201ENSMUST00000035164 LystP97412 3788 aa7.67□□□□□ -1.18
Topbp1-201ENSMUST00000035164 CnbpP53996 178 aaKnown RBP7.66□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Ighv2-9A0A075B5Q5 116 aa7.66□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Krtap11-1E9Q2E9 183 aa7.66□□□□□ -1.18
Topbp1-201ENSMUST00000035164 E130114P18RikF6S0S7 154 aa7.66□□□□□ -1.18
Topbp1-201ENSMUST00000035164 OtogO55225 2910 aa7.66□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Gm43218A0A0G2JGT0 114 aa7.66□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Erdr1J3QMM0 206 aa7.65□□□□□ -1.18
Topbp1-201ENSMUST00000035164 H2al1aQ5M8Q2 105 aa7.65□□□□□ -1.18
Topbp1-201ENSMUST00000035164 Znf414Q9DCK4 299 aa7.65□□□□□ -1.18
Topbp1-201ENSMUST00000035164 CrygeQ03740 174 aa7.65□□□□□ -1.19
Topbp1-201ENSMUST00000035164 UqcrqQ9CQ69 82 aa7.65□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Trav14-1A0A0G2JF94 121 aa7.64□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Defb38Q7TNV7 63 aa7.64□□□□□ -1.19
Topbp1-201ENSMUST00000035164 A330070K13RikQ8CA53 115 aa7.64□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Gm10197F6QEY5 67 aa7.64□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Igkv8-28A0A0G2JE47 121 aa7.64□□□□□ -1.19
Topbp1-201ENSMUST00000035164 9230102O04RikA2ASX7 82 aa7.63□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Ighv2-5A0A0A6YY69 116 aa7.63□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Sprr2jO70561 109 aa7.62□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Pkd1l1Q8R526 2615 aa7.62□□□□□ -1.19
Topbp1-201ENSMUST00000035164 AY074887Q8R5F9 132 aa7.61□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Itpr2Q9Z329 2701 aa7.61□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Igkv4-92A0A0B4J1I2 117 aa7.61□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Spint4Q9D263 159 aa7.61□□□□□ -1.19
Topbp1-201ENSMUST00000035164 C130032M10RikQ8C888 123 aa7.6□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Gm11213A0A1B0GR83 88 aa7.6□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Gm28374F6SG70 93 aa7.6□□□□□ -1.19
Topbp1-201ENSMUST00000035164 BaalcQ8VHV1 145 aa7.6□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Gm17509Q9CZ61 145 aa7.59□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Gm44790A0A0N4SV91 103 aa7.59□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Tcl1b5P56845 121 aa7.59□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Coa6Q8BGD8 79 aa7.59□□□□□ -1.19
Topbp1-201ENSMUST00000035164 Sprr1bQ62267 153 aa7.59□□□□□ -1.19
Topbp1-201ENSMUST00000035164 CubnQ9JLB4 3623 aa7.58□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Smim29Q8R043 75 aa7.58□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Krtap24-1G3X9A2 248 aa7.57□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Pou2af1Q64693 256 aa7.57□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Obox2E9PXV9 151 aa7.56□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Elof1P60003 83 aa7.56□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Mrpl34Q99N91 92 aa7.56□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Igsf10Q3V1M1 2594 aa7.56□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Atox1O08997 68 aaKnown RBP7.56□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Cox6a2P43023 97 aa7.55□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Vpreb3D3Z6J4 130 aa7.55□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Reg3aO09037 175 aa7.55□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Gm10267M0QWD8 85 aa7.55□□□□□ -1.2
Topbp1-201ENSMUST00000035164 1700074P13RikQ9D9G7 251 aa7.55□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Ighv2-2A0A075B5P8 116 aa7.54□□□□□ -1.2
Topbp1-201ENSMUST00000035164 P01821 116 aa7.54□□□□□ -1.2
Topbp1-201ENSMUST00000035164 Stab2Q8R4U0 2559 aa7.54□□□□□ -1.2
Topbp1-201ENSMUST00000035164 1700018G05RikA0A1B0GSI2 66 aa7.52□□□□□ -1.21
Topbp1-201ENSMUST00000035164 A730071L15RikQ8C4X0 137 aa7.52□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Snhg11Q4G0K9 87 aa7.51□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Ighv8-13A0A075B5Y0 101 aa7.51□□□□□ -1.21
Topbp1-201ENSMUST00000035164 PscaP57096 123 aa7.51□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Gm21886J3QJU9 214 aa7.5□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Bean1Q9EQG5 255 aa7.5□□□□□ -1.21
Topbp1-201ENSMUST00000035164 A0A286YE49 62 aa7.5□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Fam168bQ80XQ8 194 aa7.5□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Gm16485Q8C4B7 115 aa7.5□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Igkv8-19A0A0G2JFN8 121 aa7.49□□□□□ -1.21
Topbp1-201ENSMUST00000035164 B9d2Q3UK10 175 aa7.48□□□□□ -1.21
Topbp1-201ENSMUST00000035164 Q8BT88 171 aa7.48□□□□□ -1.21
Topbp1-201ENSMUST00000035164 H2al1bA0A087WP11 105 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms