RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Igkv1-122A0A140T8M9 119 aa9.04□□□□□ -0.96
Vps35-201ENSMUST00000034131 6430550D23RikE9Q1X6 194 aa9.04□□□□□ -0.96
Vps35-201ENSMUST00000034131 BC048502Q80Y74 154 aa9.04□□□□□ -0.96
Vps35-201ENSMUST00000034131 AY074887Q8R5F9 132 aa9.04□□□□□ -0.96
Vps35-201ENSMUST00000034131 Cdk2ap2Q9CPY4 127 aa9.04□□□□□ -0.96
Vps35-201ENSMUST00000034131 Utp20Q5XG71 2788 aaKnown RBP9.03□□□□□ -0.96
Vps35-201ENSMUST00000034131 Itpr3P70227 2670 aa9.02□□□□□ -0.96
Vps35-201ENSMUST00000034131 Sprr2jO70561 109 aa9.02□□□□□ -0.97
Vps35-201ENSMUST00000034131 CrygfQ9CXV3 174 aa9.02□□□□□ -0.97
Vps35-201ENSMUST00000034131 A0A286YCN5 57 aa9.02□□□□□ -0.97
Vps35-201ENSMUST00000034131 Psors1c2Q80ZC9 134 aa9.02□□□□□ -0.97
Vps35-201ENSMUST00000034131 Ly6c2P0CW03 131 aa9.01□□□□□ -0.97
Vps35-201ENSMUST00000034131 Igkv3-10A0A0G2JGN0 119 aa9.01□□□□□ -0.97
Vps35-201ENSMUST00000034131 Gm17577J3QNF7 156 aa9.01□□□□□ -0.97
Vps35-201ENSMUST00000034131 Elof1P60003 83 aa9.01□□□□□ -0.97
Vps35-201ENSMUST00000034131 Tep1P97499 2629 aa9□□□□□ -0.97
Vps35-201ENSMUST00000034131 Igkv3-2A0A075B5P0 119 aa9□□□□□ -0.97
Vps35-201ENSMUST00000034131 Bahcc1Q3UHR0 2643 aa8.99□□□□□ -0.97
Vps35-201ENSMUST00000034131 Sox16Q62247 57 aa8.99□□□□□ -0.97
Vps35-201ENSMUST00000034131 Trav14-1A0A0G2JF94 121 aa8.99□□□□□ -0.97
Vps35-201ENSMUST00000034131 A0A286YE02 88 aa8.99□□□□□ -0.97
Vps35-201ENSMUST00000034131 OtogO55225 2910 aa8.98□□□□□ -0.97
Vps35-201ENSMUST00000034131 Gm9913Q8BQQ2 135 aa8.98□□□□□ -0.97
Vps35-201ENSMUST00000034131 Leap2Q91V13 76 aa8.98□□□□□ -0.97
Vps35-201ENSMUST00000034131 Gm9767G3X930 207 aa8.97□□□□□ -0.97
Vps35-201ENSMUST00000034131 Atox1O08997 68 aaKnown RBP8.97□□□□□ -0.97
Vps35-201ENSMUST00000034131 FlncQ8VHX6 2726 aaKnown RBP8.96□□□□□ -0.97
Vps35-201ENSMUST00000034131 Setd2E9Q5F9 2537 aa8.95□□□□□ -0.98
Vps35-201ENSMUST00000034131 Igkv3-1A0A075B5P1 119 aa8.95□□□□□ -0.98
Vps35-201ENSMUST00000034131 Krtap11-1E9Q2E9 183 aa8.95□□□□□ -0.98
Vps35-201ENSMUST00000034131 Nf1Q04690 2841 aa8.95□□□□□ -0.98
Vps35-201ENSMUST00000034131 C130032M10RikQ8C888 123 aa8.95□□□□□ -0.98
Vps35-201ENSMUST00000034131 Coa5Q99M07 74 aa8.93□□□□□ -0.98
Vps35-201ENSMUST00000034131 9230102O04RikA2ASX7 82 aa8.92□□□□□ -0.98
Vps35-201ENSMUST00000034131 FlnbQ80X90 2602 aaKnown RBP8.92□□□□□ -0.98
Vps35-201ENSMUST00000034131 Defb18Q30KP5 85 aa8.92□□□□□ -0.98
Vps35-201ENSMUST00000034131 Gm17509Q9CZ61 145 aa8.92□□□□□ -0.98
Vps35-201ENSMUST00000034131 Cox7b2Q9D2H1 82 aa8.92□□□□□ -0.98
Vps35-201ENSMUST00000034131 Gm16181B0V2H2 73 aa8.91□□□□□ -0.98
Vps35-201ENSMUST00000034131 Gm20604F8WIA3 75 aa8.9□□□□□ -0.98
Vps35-201ENSMUST00000034131 Cox6a2P43023 97 aa8.9□□□□□ -0.98
Vps35-201ENSMUST00000034131 Defb40Q70KL2 73 aa8.9□□□□□ -0.98
Vps35-201ENSMUST00000034131 Mrpl34Q99N91 92 aa8.9□□□□□ -0.98
Vps35-201ENSMUST00000034131 Igkv8-19A0A0G2JFN8 121 aa8.89□□□□□ -0.99
Vps35-201ENSMUST00000034131 Igkv4-92A0A0B4J1I2 117 aa8.89□□□□□ -0.99
Vps35-201ENSMUST00000034131 Gm11565A2A4M7 156 aa8.89□□□□□ -0.99
Vps35-201ENSMUST00000034131 Akap13E9Q394 2776 aa8.89□□□□□ -0.99
Vps35-201ENSMUST00000034131 4933415A04RikQ9D443 101 aa8.88□□□□□ -0.99
Vps35-201ENSMUST00000034131 A730009L09RikA0A1B0GS82 72 aa8.88□□□□□ -0.99
Vps35-201ENSMUST00000034131 Camk2n2Q78WH7 79 aa8.87□□□□□ -0.99
Vps35-201ENSMUST00000034131 Epg5Q80TA9 2572 aa8.87□□□□□ -0.99
Vps35-201ENSMUST00000034131 Hivep3A2A884 2348 aa8.85□□□□□ -0.99
Vps35-201ENSMUST00000034131 Gm44790A0A0N4SV91 103 aa8.85□□□□□ -0.99
Vps35-201ENSMUST00000034131 Unc79Q0KK59 2596 aa8.84□□□□□ -0.99
Vps35-201ENSMUST00000034131 Gm7276Q3TYW4 209 aa8.84□□□□□ -0.99
Vps35-201ENSMUST00000034131 Ccl21aP84444 133 aa8.84□□□□□ -1
Vps35-201ENSMUST00000034131 Ccl21bP86792 133 aa8.84□□□□□ -1
Vps35-201ENSMUST00000034131 Ccl21cP86793 133 aa8.84□□□□□ -1
Vps35-201ENSMUST00000034131 NipblQ6KCD5 2798 aaKnown RBP8.83□□□□□ -1
Vps35-201ENSMUST00000034131 Col7a1Q63870 2944 aa8.83□□□□□ -1
Vps35-201ENSMUST00000034131 Igkv3-4A0A140T8Q4 119 aa8.82□□□□□ -1
Vps35-201ENSMUST00000034131 Gm17521F6QAC8 156 aa8.82□□□□□ -1
Vps35-201ENSMUST00000034131 Ccdc179J3QM76 67 aa8.82□□□□□ -1
Vps35-201ENSMUST00000034131 Smim29Q8R043 75 aa8.82□□□□□ -1
Vps35-201ENSMUST00000034131 MtorQ9JLN9 2549 aa8.8□□□□□ -1
Vps35-201ENSMUST00000034131 Phxr4P15974 95 aa8.8□□□□□ -1
Vps35-201ENSMUST00000034131 D730001G18RikA0A087WQU7 115 aa8.79□□□□□ -1
Vps35-201ENSMUST00000034131 Myo18bE9PV66 2605 aa8.78□□□□□ -1
Vps35-201ENSMUST00000034131 Defb2P82020 71 aa8.78□□□□□ -1
Vps35-201ENSMUST00000034131 Cmc4Q61908 68 aa8.78□□□□□ -1
Vps35-201ENSMUST00000034131 Ankrd17Q99NH0 2603 aaKnown RBP8.77□□□□□ -1.01
Vps35-201ENSMUST00000034131 A0A286YE49 62 aa8.76□□□□□ -1.01
Vps35-201ENSMUST00000034131 Gm12353A2AGJ4 60 aa8.75□□□□□ -1.01
Vps35-201ENSMUST00000034131 PscaP57096 123 aa8.75□□□□□ -1.01
Vps35-201ENSMUST00000034131 1700074P13RikQ9D9G7 251 aa8.75□□□□□ -1.01
Vps35-201ENSMUST00000034131 Ube2bP63147 152 aa8.75□□□□□ -1.01
Vps35-201ENSMUST00000034131 B9d2Q3UK10 175 aa8.74□□□□□ -1.01
Vps35-201ENSMUST00000034131 Sprr4Q8CGN8 76 aa8.74□□□□□ -1.01
Vps35-201ENSMUST00000034131 Ighv8-13A0A075B5Y0 101 aa8.73□□□□□ -1.01
Vps35-201ENSMUST00000034131 Vpreb3D3Z6J4 130 aa8.72□□□□□ -1.01
Vps35-201ENSMUST00000034131 Reg3bP35230 175 aa8.72□□□□□ -1.01
Vps35-201ENSMUST00000034131 Ube2aQ9Z255 152 aa8.72□□□□□ -1.01
Vps35-201ENSMUST00000034131 Xirp2Q4U4S6 3784 aa8.72□□□□□ -1.01
Vps35-201ENSMUST00000034131 Gm21886J3QJU9 214 aa8.72□□□□□ -1.01
Vps35-201ENSMUST00000034131 Reg3aO09037 175 aa8.7□□□□□ -1.02
Vps35-201ENSMUST00000034131 Zfp462B1AWL2 2495 aaKnown RBP8.69□□□□□ -1.02
Vps35-201ENSMUST00000034131 1700018G05RikA0A1B0GSI2 66 aa8.68□□□□□ -1.02
Vps35-201ENSMUST00000034131 Fam104aA2A6P4 185 aa8.68□□□□□ -1.02
Vps35-201ENSMUST00000034131 Dmac1Q9CQ00 111 aa8.68□□□□□ -1.02
Vps35-201ENSMUST00000034131 FlnaQ8BTM8 2647 aaKnown RBP8.68□□□□□ -1.02
Vps35-201ENSMUST00000034131 Snhg11Q4G0K9 87 aa8.68□□□□□ -1.02
Vps35-201ENSMUST00000034131 U90926O08546 118 aa8.68□□□□□ -1.02
Vps35-201ENSMUST00000034131 Gm10160F6Y577 67 aa8.67□□□□□ -1.02
Vps35-201ENSMUST00000034131 Gm37013Q8K491 104 aa8.67□□□□□ -1.02
Vps35-201ENSMUST00000034131 Pdzd2E9Q1M1 2796 aa8.67□□□□□ -1.02
Vps35-201ENSMUST00000034131 Usp9yF8VPU6 2556 aa8.67□□□□□ -1.02
Vps35-201ENSMUST00000034131 1700042G07RikB1AUF7 90 aa8.67□□□□□ -1.02
Vps35-201ENSMUST00000034131 Gm10643Q3URG9 111 aa8.67□□□□□ -1.02
Vps35-201ENSMUST00000034131 SptssbQ925E8 76 aa8.67□□□□□ -1.02
Vps35-201ENSMUST00000034131 Phxr5P08399 672 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms