RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 MobpQ9D2P8 170 aa7.47□□□□□ -1.21
Ciita-201ENSMUST00000023147 Srsf12Q8C8K3 266 aa7.47□□□□□ -1.21
Ciita-201ENSMUST00000023147 Dmac1Q9CQ00 111 aa7.45□□□□□ -1.22
Ciita-201ENSMUST00000023147 Epg5Q80TA9 2572 aa7.45□□□□□ -1.22
Ciita-201ENSMUST00000023147 Cep192E9Q4Y4 2514 aaKnown RBP7.44□□□□□ -1.22
Ciita-201ENSMUST00000023147 Gm10300Q8C8P7 189 aa7.44□□□□□ -1.22
Ciita-201ENSMUST00000023147 Gm10308Q9CVR5 141 aa7.44□□□□□ -1.22
Ciita-201ENSMUST00000023147 CicQ924A2 2510 aa7.43□□□□□ -1.22
Ciita-201ENSMUST00000023147 Usp34Q6ZQ93 3582 aa7.43□□□□□ -1.22
Ciita-201ENSMUST00000023147 7530416G11RikJ3QJX6 159 aa7.43□□□□□ -1.22
Ciita-201ENSMUST00000023147 Spaca4Q80ZQ0 127 aa7.43□□□□□ -1.22
Ciita-201ENSMUST00000023147 Hcfc1Q61191 2045 aaKnown RBP7.43□□□□□ -1.22
Ciita-201ENSMUST00000023147 Chd7A2AJK6 2986 aaKnown RBP7.42□□□□□ -1.22
Ciita-201ENSMUST00000023147 Gm26661M0QWV4 156 aa7.42□□□□□ -1.22
Ciita-201ENSMUST00000023147 Gm44790A0A0N4SV91 103 aa7.4□□□□□ -1.23
Ciita-201ENSMUST00000023147 A530084C06RikQ3UTW2 186 aa7.39□□□□□ -1.23
Ciita-201ENSMUST00000023147 TrioQ0KL02 3102 aa7.39□□□□□ -1.23
Ciita-201ENSMUST00000023147 Eif4ebp3Q80VV3 101 aa7.38□□□□□ -1.23
Ciita-201ENSMUST00000023147 Elof1P60003 83 aa7.38□□□□□ -1.23
Ciita-201ENSMUST00000023147 Fn1P11276 2477 aaKnown RBP7.38□□□□□ -1.23
Ciita-201ENSMUST00000023147 Rnase13Q5GAM7 153 aa7.37□□□□□ -1.23
Ciita-201ENSMUST00000023147 Cdc42se1Q8BHL7 80 aa7.36□□□□□ -1.23
Ciita-201ENSMUST00000023147 Myo18bE9PV66 2605 aa7.36□□□□□ -1.23
Ciita-201ENSMUST00000023147 E130208F15RikQ3UPV3 143 aa7.36□□□□□ -1.23
Ciita-201ENSMUST00000023147 RetnlbQ99P86 105 aa7.36□□□□□ -1.23
Ciita-201ENSMUST00000023147 Lama3Q61789 3330 aa7.36□□□□□ -1.23
Ciita-201ENSMUST00000023147 Pla2g10Q9QXX3 151 aa7.36□□□□□ -1.23
Ciita-201ENSMUST00000023147 Mki67E9PVX6 3177 aaKnown RBP7.35□□□□□ -1.23
Ciita-201ENSMUST00000023147 Gm10772F7AIG4 85 aa7.35□□□□□ -1.23
Ciita-201ENSMUST00000023147 Gm27235Q3UW50 83 aa7.35□□□□□ -1.23
Ciita-201ENSMUST00000023147 Bahcc1Q3UHR0 2643 aa7.34□□□□□ -1.23
Ciita-201ENSMUST00000023147 Phf5aP83870 110 aaKnown RBP7.34□□□□□ -1.23
Ciita-201ENSMUST00000023147 Lama2Q60675 3118 aaKnown RBP7.34□□□□□ -1.23
Ciita-201ENSMUST00000023147 Unc79Q0KK59 2596 aa7.33□□□□□ -1.24
Ciita-201ENSMUST00000023147 Defb1P56386 69 aa7.33□□□□□ -1.24
Ciita-201ENSMUST00000023147 Spata3Q9D9T6 193 aa7.32□□□□□ -1.24
Ciita-201ENSMUST00000023147 1810062G17RikG3X8Y2 129 aa7.31□□□□□ -1.24
Ciita-201ENSMUST00000023147 Sprr1bQ62267 153 aa7.3□□□□□ -1.24
Ciita-201ENSMUST00000023147 FlnbQ80X90 2602 aaKnown RBP7.3□□□□□ -1.24
Ciita-201ENSMUST00000023147 Gm11565A2A4M7 156 aa7.29□□□□□ -1.24
Ciita-201ENSMUST00000023147 Nbeal1E9PYP2 2688 aa7.28□□□□□ -1.24
Ciita-201ENSMUST00000023147 CriptO70333 101 aa7.28□□□□□ -1.24
Ciita-201ENSMUST00000023147 Rpl37aP61514 92 aa7.28□□□□□ -1.24
Ciita-201ENSMUST00000023147 Q8BT88 171 aa7.28□□□□□ -1.24
Ciita-201ENSMUST00000023147 Uqcr11Q9CPX8 56 aa7.28□□□□□ -1.24
Ciita-201ENSMUST00000023147 Cfap54Q8C6S9 3106 aa7.28□□□□□ -1.24
Ciita-201ENSMUST00000023147 Gm10770F7D043 238 aa7.27□□□□□ -1.25
Ciita-201ENSMUST00000023147 Gm5617Q91VN2 117 aa7.25□□□□□ -1.25
Ciita-201ENSMUST00000023147 Gm10643Q3URG9 111 aa7.24□□□□□ -1.25
Ciita-201ENSMUST00000023147 Phxr5P08399 672 aa7.24□□□□□ -1.25
Ciita-201ENSMUST00000023147 Snhg11Q4G0K9 87 aa7.24□□□□□ -1.25
Ciita-201ENSMUST00000023147 Zfp292Q9Z2U2 2698 aa7.23□□□□□ -1.25
Ciita-201ENSMUST00000023147 Coa5Q99M07 74 aa7.23□□□□□ -1.25
Ciita-201ENSMUST00000023147 Phxr4P15974 95 aa7.23□□□□□ -1.25
Ciita-201ENSMUST00000023147 Gm11213A0A1B0GR83 88 aa7.22□□□□□ -1.25
Ciita-201ENSMUST00000023147 Col12a1Q60847 3120 aa7.21□□□□□ -1.25
Ciita-201ENSMUST00000023147 Usp24B1AY13 2617 aaKnown RBP7.21□□□□□ -1.26
Ciita-201ENSMUST00000023147 Cypt15B1AXS0 87 aa7.2□□□□□ -1.26
Ciita-201ENSMUST00000023147 Lypd5Q9D7Z7 256 aa7.19□□□□□ -1.26
Ciita-201ENSMUST00000023147 Map1aQ9QYR6 2776 aa7.18□□□□□ -1.26
Ciita-201ENSMUST00000023147 AY074887Q8R5F9 132 aa7.18□□□□□ -1.26
Ciita-201ENSMUST00000023147 Krtap24-1G3X9A2 248 aa7.17□□□□□ -1.26
Ciita-201ENSMUST00000023147 Abca12E9Q876 2595 aa7.16□□□□□ -1.26
Ciita-201ENSMUST00000023147 Cdh23Q99PF4 3354 aa7.16□□□□□ -1.26
Ciita-201ENSMUST00000023147 Gm26620Q9CY65 116 aa7.15□□□□□ -1.26
Ciita-201ENSMUST00000023147 CnbpP53996 178 aaKnown RBP7.15□□□□□ -1.26
Ciita-201ENSMUST00000023147 Gm7276Q3TYW4 209 aa7.15□□□□□ -1.26
Ciita-201ENSMUST00000023147 Rev3lQ61493 3122 aa7.14□□□□□ -1.27
Ciita-201ENSMUST00000023147 Prune2Q52KR3 3084 aa7.14□□□□□ -1.27
Ciita-201ENSMUST00000023147 AW011738F6S7Q2 159 aa7.14□□□□□ -1.27
Ciita-201ENSMUST00000023147 C530025M09RikF6RGA8 229 aa7.13□□□□□ -1.27
Ciita-201ENSMUST00000023147 Sprr4Q8CGN8 76 aa7.11□□□□□ -1.27
Ciita-201ENSMUST00000023147 Szt2A2A9C3 3431 aa7.08□□□□□ -1.28
Ciita-201ENSMUST00000023147 Krtap11-1E9Q2E9 183 aa7.08□□□□□ -1.28
Ciita-201ENSMUST00000023147 Fam168bQ80XQ8 194 aa7.08□□□□□ -1.28
Ciita-201ENSMUST00000023147 SmcpP15265 143 aa7.08□□□□□ -1.28
Ciita-201ENSMUST00000023147 OxtP35454 125 aa7.08□□□□□ -1.28
Ciita-201ENSMUST00000023147 Gm7173A0A0G2JEB6 3132 aa7.07□□□□□ -1.28
Ciita-201ENSMUST00000023147 Gm21798J3QNU5 87 aa7.07□□□□□ -1.28
Ciita-201ENSMUST00000023147 Gm9821Q8K076 103 aa7.06□□□□□ -1.28
Ciita-201ENSMUST00000023147 Prrc2cQ3TLH4 2846 aaKnown RBP7.06□□□□□ -1.28
Ciita-201ENSMUST00000023147 Spink7Q6IE32 76 aa7.06□□□□□ -1.28
Ciita-201ENSMUST00000023147 Kmt2bO08550 2713 aa7.04□□□□□ -1.28
Ciita-201ENSMUST00000023147 Jbts17Q8CE72 3214 aa7.04□□□□□ -1.28
Ciita-201ENSMUST00000023147 Fam229bQ8CF36 80 aa7.04□□□□□ -1.28
Ciita-201ENSMUST00000023147 Unc80Q8BLN6 3261 aa7.03□□□□□ -1.28
Ciita-201ENSMUST00000023147 A330070K13RikQ8CA53 115 aa7.02□□□□□ -1.29
Ciita-201ENSMUST00000023147 Lelp1Q9DAE3 120 aa7.01□□□□□ -1.29
Ciita-201ENSMUST00000023147 Myo15bI7HPW8 3033 aa7□□□□□ -1.29
Ciita-201ENSMUST00000023147 AtrQ9JKK8 2635 aa7□□□□□ -1.29
Ciita-201ENSMUST00000023147 Gm9955Q8CEJ8 102 aa7□□□□□ -1.29
Ciita-201ENSMUST00000023147 2310034C09RikQ9D746 214 aa7□□□□□ -1.29
Ciita-201ENSMUST00000023147 Ranbp2Q9ERU9 3053 aaKnown RBP7□□□□□ -1.29
Ciita-201ENSMUST00000023147 Gm3250E9Q1M3 230 aa6.99□□□□□ -1.29
Ciita-201ENSMUST00000023147 Cystm1Q8K353 104 aa6.99□□□□□ -1.29
Ciita-201ENSMUST00000023147 Ankrd17Q99NH0 2603 aaKnown RBP6.99□□□□□ -1.29
Ciita-201ENSMUST00000023147 Hectd1Q69ZR2 2618 aaKnown RBP6.99□□□□□ -1.29
Ciita-201ENSMUST00000023147 Defb9Q8R2I6 67 aa6.99□□□□□ -1.29
Ciita-201ENSMUST00000023147 Chtf8P0CG14 533 aa6.98□□□□□ -1.29
Ciita-201ENSMUST00000023147 Gm9195A0A140LHT4 2805 aa6.98□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms