RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 7530416G11RikJ3QJX6 159 aa8.24□□□□□ -1.09
Ldb3-201ENSMUST00000022327 Lypd5Q9D7Z7 256 aa8.23□□□□□ -1.09
Ldb3-201ENSMUST00000022327 Eif4ebp3Q80VV3 101 aa8.22□□□□□ -1.09
Ldb3-201ENSMUST00000022327 Krtap11-1E9Q2E9 183 aa8.21□□□□□ -1.09
Ldb3-201ENSMUST00000022327 Q8BT88 171 aa8.21□□□□□ -1.09
Ldb3-201ENSMUST00000022327 Gm17606F6ZL36 78 aa8.21□□□□□ -1.1
Ldb3-201ENSMUST00000022327 AplnQ9R0R4 77 aa8.21□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Unc79Q0KK59 2596 aa8.21□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Gm17689B3GLJ4 109 aa8.2□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Prr13Q9CQJ5 137 aa8.19□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Gm7276Q3TYW4 209 aa8.18□□□□□ -1.1
Ldb3-201ENSMUST00000022327 A930002H24RikQ8C8Y3 163 aa8.18□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Cdc42se1Q8BHL7 80 aa8.17□□□□□ -1.1
Ldb3-201ENSMUST00000022327 1810062G17RikG3X8Y2 129 aa8.17□□□□□ -1.1
Ldb3-201ENSMUST00000022327 4930507D05RikQ8C9C9 103 aa8.17□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Gm10999F6Q4M4 69 aa8.16□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Gpr15lA0A0B4J1N3 78 aa8.16□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Gm3250E9Q1M3 230 aa8.16□□□□□ -1.1
Ldb3-201ENSMUST00000022327 Myo18bE9PV66 2605 aa8.15□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Fam168bQ80XQ8 194 aa8.15□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Rpl37aP61514 92 aa8.14□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Gm11565A2A4M7 156 aa8.14□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Ankrd17Q99NH0 2603 aaKnown RBP8.13□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Coa5Q99M07 74 aa8.13□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Gm20661K7N787 53 aa8.12□□□□□ -1.11
Ldb3-201ENSMUST00000022327 C530025M09RikF6RGA8 229 aa8.11□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Spaca4Q80ZQ0 127 aa8.11□□□□□ -1.11
Ldb3-201ENSMUST00000022327 CenpfE9Q3P4 2997 aaKnown RBP8.11□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Zfp292Q9Z2U2 2698 aa8.1□□□□□ -1.11
Ldb3-201ENSMUST00000022327 Gm5617Q91VN2 117 aa8.08□□□□□ -1.12
Ldb3-201ENSMUST00000022327 Gm12216A0A1W2P827 62 aa8.08□□□□□ -1.12
Ldb3-201ENSMUST00000022327 Golgb1E9PVZ8 3238 aa8.07□□□□□ -1.12
Ldb3-201ENSMUST00000022327 Usp9yF8VPU6 2556 aa8.06□□□□□ -1.12
Ldb3-201ENSMUST00000022327 Phxr4P15974 95 aa8.05□□□□□ -1.12
Ldb3-201ENSMUST00000022327 Gm11213A0A1B0GR83 88 aa8.04□□□□□ -1.12
Ldb3-201ENSMUST00000022327 CnbpP53996 178 aaKnown RBP8.03□□□□□ -1.12
Ldb3-201ENSMUST00000022327 A330070K13RikQ8CA53 115 aa8.03□□□□□ -1.12
Ldb3-201ENSMUST00000022327 Q8BGJ3 129 aa8.03□□□□□ -1.12
Ldb3-201ENSMUST00000022327 Fam104aA2A6P4 185 aa7.99□□□□□ -1.13
Ldb3-201ENSMUST00000022327 Uqcr11Q9CPX8 56 aa7.99□□□□□ -1.13
Ldb3-201ENSMUST00000022327 Nbeal1E9PYP2 2688 aa7.97□□□□□ -1.13
Ldb3-201ENSMUST00000022327 Cypt15B1AXS0 87 aa7.97□□□□□ -1.13
Ldb3-201ENSMUST00000022327 Defb9Q8R2I6 67 aa7.97□□□□□ -1.13
Ldb3-201ENSMUST00000022327 Zcchc13Q9D548 170 aa7.96□□□□□ -1.13
Ldb3-201ENSMUST00000022327 Gm10643Q3URG9 111 aa7.95□□□□□ -1.14
Ldb3-201ENSMUST00000022327 CicQ924A2 2510 aa7.94□□□□□ -1.14
Ldb3-201ENSMUST00000022327 RetnlbQ99P86 105 aa7.92□□□□□ -1.14
Ldb3-201ENSMUST00000022327 Defb1P56386 69 aa7.92□□□□□ -1.14
Ldb3-201ENSMUST00000022327 PcntP48725 2898 aa7.91□□□□□ -1.14
Ldb3-201ENSMUST00000022327 Chtf8P0CG14 533 aa7.87□□□□□ -1.15
Ldb3-201ENSMUST00000022327 Lelp1Q9DAE3 120 aa7.86□□□□□ -1.15
Ldb3-201ENSMUST00000022327 Ankrd11E9Q4F7 2643 aa7.85□□□□□ -1.15
Ldb3-201ENSMUST00000022327 FasnP19096 2504 aaKnown RBP7.84□□□□□ -1.15
Ldb3-201ENSMUST00000022327 Gm42715A0A087WP63 3095 aaKnown RBP7.84□□□□□ -1.15
Ldb3-201ENSMUST00000022327 Gm3233E9Q2H5 230 aa7.84□□□□□ -1.15
Ldb3-201ENSMUST00000022327 Fam229bQ8CF36 80 aa7.84□□□□□ -1.15
Ldb3-201ENSMUST00000022327 Gm26620Q9CY65 116 aa7.83□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Gcn1E9PVA8 2671 aaKnown RBP7.83□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Cypt14J3QPF7 87 aa7.83□□□□□ -1.16
Ldb3-201ENSMUST00000022327 FlnbQ80X90 2602 aaKnown RBP7.83□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Phxr5P08399 672 aa7.83□□□□□ -1.16
Ldb3-201ENSMUST00000022327 OxtP35454 125 aa7.83□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Plac8Q9JI48 112 aa7.82□□□□□ -1.16
Ldb3-201ENSMUST00000022327 FlnaQ8BTM8 2647 aaKnown RBP7.82□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Gm10065F6TJM2 114 aa7.81□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Mp68P56379 58 aa7.8□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Anapc11Q9CPX9 84 aa7.79□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Dnah12Q3V0Q1 3086 aa7.78□□□□□ -1.16
Ldb3-201ENSMUST00000022327 NbdyA0A0N4SUI7 68 aa7.78□□□□□ -1.16
Ldb3-201ENSMUST00000022327 Smim29Q8R043 75 aa7.77□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Gm9195A0A140LHT4 2805 aa7.77□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Gm10320E9PW43 113 aa7.76□□□□□ -1.17
Ldb3-201ENSMUST00000022327 AtrQ9JKK8 2635 aa7.75□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Dmbt1Q60997 2085 aa7.73□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Ep400Q8CHI8 3072 aaKnown RBP7.73□□□□□ -1.17
Ldb3-201ENSMUST00000022327 2310034C09RikQ9D746 214 aa7.73□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Nsd1O88491 2588 aaKnown RBP7.73□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Usp24B1AY13 2617 aaKnown RBP7.73□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Gm21798J3QNU5 87 aa7.72□□□□□ -1.17
Ldb3-201ENSMUST00000022327 Rnase13Q5GAM7 153 aa7.7□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Cep350E9Q309 3095 aa7.69□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Fn1P11276 2477 aaKnown RBP7.68□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Gm10139O88245 57 aa7.67□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Sprr1aQ62266 144 aa7.67□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Hectd1Q69ZR2 2618 aaKnown RBP7.67□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Tnrc18Q80WC3 2878 aa7.66□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Gm7138L7N2C3 230 aa7.66□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Gm3238W4VSP7 230 aa7.66□□□□□ -1.18
Ldb3-201ENSMUST00000022327 Notch1Q01705 2531 aa7.65□□□□□ -1.19
Ldb3-201ENSMUST00000022327 Odf3bQ5M8M2 238 aa7.63□□□□□ -1.19
Ldb3-201ENSMUST00000022327 Prrc2cQ3TLH4 2846 aaKnown RBP7.62□□□□□ -1.19
Ldb3-201ENSMUST00000022327 6030445D17RikE9Q8F9 148 aa7.62□□□□□ -1.19
Ldb3-201ENSMUST00000022327 Prune2Q52KR3 3084 aa7.6□□□□□ -1.19
Ldb3-201ENSMUST00000022327 Cystm1Q8K353 104 aa7.6□□□□□ -1.19
Ldb3-201ENSMUST00000022327 Map1aQ9QYR6 2776 aa7.58□□□□□ -1.2
Ldb3-201ENSMUST00000022327 NipblQ6KCD5 2798 aaKnown RBP7.58□□□□□ -1.2
Ldb3-201ENSMUST00000022327 A730071L15RikQ8C4X0 137 aa7.58□□□□□ -1.2
Ldb3-201ENSMUST00000022327 Kmt2bO08550 2713 aa7.56□□□□□ -1.2
Ldb3-201ENSMUST00000022327 Gm9955Q8CEJ8 102 aa7.56□□□□□ -1.2
Ldb3-201ENSMUST00000022327 Stab1Q8R4Y4 2571 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms