RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Q9DAA7 145 aa7.51□□□□□ -1.21
Msh3-201ENSMUST00000022220 Tenm4Q3UHK6 2771 aa7.51□□□□□ -1.21
Msh3-201ENSMUST00000022220 Zfand2aQ9JII7 171 aa7.5□□□□□ -1.21
Msh3-201ENSMUST00000022220 OtogO55225 2910 aa7.49□□□□□ -1.21
Msh3-201ENSMUST00000022220 1810062G17RikG3X8Y2 129 aa7.48□□□□□ -1.21
Msh3-201ENSMUST00000022220 A530084C06RikQ3UTW2 186 aa7.48□□□□□ -1.21
Msh3-201ENSMUST00000022220 Pou2af1Q64693 256 aa7.48□□□□□ -1.21
Msh3-201ENSMUST00000022220 Ighv10-3A0A075B5T6 119 aa7.48□□□□□ -1.21
Msh3-201ENSMUST00000022220 Igkv4-92A0A0B4J1I2 117 aa7.48□□□□□ -1.21
Msh3-201ENSMUST00000022220 Gm9805F6YK59 57 aa7.47□□□□□ -1.21
Msh3-201ENSMUST00000022220 Prr15lQ8JZM2 100 aa7.47□□□□□ -1.21
Msh3-201ENSMUST00000022220 Igkv8-21A0A140T8P7 120 aa7.47□□□□□ -1.21
Msh3-201ENSMUST00000022220 CrygaP04345 174 aa7.47□□□□□ -1.21
Msh3-201ENSMUST00000022220 Fam229bQ8CF36 80 aa7.47□□□□□ -1.21
Msh3-201ENSMUST00000022220 Odf3l2Q3TZ65 277 aa7.46□□□□□ -1.21
Msh3-201ENSMUST00000022220 Ighv2-9-1A0A075B697 116 aa7.45□□□□□ -1.22
Msh3-201ENSMUST00000022220 P06320 134 aa7.45□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm16485Q8C4B7 115 aa7.45□□□□□ -1.22
Msh3-201ENSMUST00000022220 Igkv8-27A0A0G2JF28 120 aa7.45□□□□□ -1.22
Msh3-201ENSMUST00000022220 Igkv8-30A0A140T8M3 121 aa7.45□□□□□ -1.22
Msh3-201ENSMUST00000022220 9530003J23RikQ8BM26 151 aa7.45□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm4707V9GXN5 68 aa7.44□□□□□ -1.22
Msh3-201ENSMUST00000022220 4930556J24RikQ9D4U7 146 aa7.44□□□□□ -1.22
Msh3-201ENSMUST00000022220 Ighv10-1A0A0B4J1J6 119 aa7.44□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm37389A0A0A6YW05 95 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Pde6gP09174 87 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Nupr2Q497P3 102 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm9903Q8C9Y8 129 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Znf414Q9DCK4 299 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm11565A2A4M7 156 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm11011D3Z3L9 86 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Ighv2-9A0A075B5Q5 116 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm10308Q9CVR5 141 aa7.43□□□□□ -1.22
Msh3-201ENSMUST00000022220 Tcl1b3P56842 122 aa7.42□□□□□ -1.22
Msh3-201ENSMUST00000022220 BaalcQ8VHV1 145 aa7.42□□□□□ -1.22
Msh3-201ENSMUST00000022220 MobpQ9D2P8 170 aa7.42□□□□□ -1.22
Msh3-201ENSMUST00000022220 Klk9Q32M27 251 aa7.42□□□□□ -1.22
Msh3-201ENSMUST00000022220 Wfdc13Q5DQQ6 81 aa7.42□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm17689B3GLJ4 109 aa7.42□□□□□ -1.22
Msh3-201ENSMUST00000022220 Ighv8-13A0A075B5Y0 101 aa7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm10570F6VB42 170 aa7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 Gm10772F7AIG4 85 aa7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 P01819 144 aa7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 B9d2Q3UK10 175 aa7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 Defb50Q6TU36 73 aa7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 Srrm2Q8BTI8 2703 aaKnown RBP7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 UqcrqQ9CQ69 82 aa7.41□□□□□ -1.22
Msh3-201ENSMUST00000022220 Ly6g6cQ9Z1Q4 126 aa7.4□□□□□ -1.22
Msh3-201ENSMUST00000022220 H2al1bA0A087WP11 105 aa7.39□□□□□ -1.23
Msh3-201ENSMUST00000022220 9230102O04RikA2ASX7 82 aa7.39□□□□□ -1.23
Msh3-201ENSMUST00000022220 H2al1kJ3QP08 105 aa7.39□□□□□ -1.23
Msh3-201ENSMUST00000022220 H2al1eQ810S6 105 aa7.39□□□□□ -1.23
Msh3-201ENSMUST00000022220 H2al1mQ9DAD9 105 aa7.39□□□□□ -1.23
Msh3-201ENSMUST00000022220 Obox2E9PXV9 151 aa7.39□□□□□ -1.23
Msh3-201ENSMUST00000022220 Ube2aQ9Z255 152 aa7.38□□□□□ -1.23
Msh3-201ENSMUST00000022220 A830005F24RikQ8BRT5 167 aa7.38□□□□□ -1.23
Msh3-201ENSMUST00000022220 Gm11213A0A1B0GR83 88 aa7.38□□□□□ -1.23
Msh3-201ENSMUST00000022220 CnbpP53996 178 aaKnown RBP7.38□□□□□ -1.23
Msh3-201ENSMUST00000022220 Gm36176A0A1W2P8D5 158 aa7.37□□□□□ -1.23
Msh3-201ENSMUST00000022220 SycnQ8VCK7 134 aa7.37□□□□□ -1.23
Msh3-201ENSMUST00000022220 Gm28374F6SG70 93 aa7.37□□□□□ -1.23
Msh3-201ENSMUST00000022220 Trav14-1A0A0G2JF94 121 aa7.36□□□□□ -1.23
Msh3-201ENSMUST00000022220 E130208F15RikQ3UPV3 143 aa7.36□□□□□ -1.23
Msh3-201ENSMUST00000022220 Spint4Q9D263 159 aa7.36□□□□□ -1.23
Msh3-201ENSMUST00000022220 2310034G01RikA0A286YDL3 209 aa7.36□□□□□ -1.23
Msh3-201ENSMUST00000022220 Igkv3-10A0A0G2JGN0 119 aa7.36□□□□□ -1.23
Msh3-201ENSMUST00000022220 Cox7bP56393 80 aa7.36□□□□□ -1.23
Msh3-201ENSMUST00000022220 A730009L09RikA0A1B0GS82 72 aa7.35□□□□□ -1.23
Msh3-201ENSMUST00000022220 Defb37Q7TMD2 62 aa7.35□□□□□ -1.23
Msh3-201ENSMUST00000022220 Snhg11Q4G0K9 87 aa7.35□□□□□ -1.23
Msh3-201ENSMUST00000022220 Gm17521F6QAC8 156 aa7.34□□□□□ -1.23
Msh3-201ENSMUST00000022220 Sec61gP60060 68 aa7.34□□□□□ -1.23
Msh3-201ENSMUST00000022220 Defb40Q70KL2 73 aa7.34□□□□□ -1.23
Msh3-201ENSMUST00000022220 Bean1Q9EQG5 255 aa7.34□□□□□ -1.23
Msh3-201ENSMUST00000022220 Gm10401E9Q3K6 71 aa7.34□□□□□ -1.23
Msh3-201ENSMUST00000022220 Gm16181B0V2H2 73 aa7.33□□□□□ -1.24
Msh3-201ENSMUST00000022220 Ighv2-5A0A0A6YY69 116 aa7.33□□□□□ -1.24
Msh3-201ENSMUST00000022220 Igkv1-110A0A0B4J1I0 119 aa7.33□□□□□ -1.24
Msh3-201ENSMUST00000022220 Gm10197F6QEY5 67 aa7.33□□□□□ -1.24
Msh3-201ENSMUST00000022220 Wfdc17Q5SSJ1 76 aa7.33□□□□□ -1.24
Msh3-201ENSMUST00000022220 Msrb1Q9JLC3 116 aa7.33□□□□□ -1.24
Msh3-201ENSMUST00000022220 Gm43218A0A0G2JGT0 114 aa7.32□□□□□ -1.24
Msh3-201ENSMUST00000022220 Igkv3-5A0A140T8M6 119 aa7.32□□□□□ -1.24
Msh3-201ENSMUST00000022220 6430550D23RikE9Q1X6 194 aa7.31□□□□□ -1.24
Msh3-201ENSMUST00000022220 FcgbpE9Q0B5 2583 aa7.3□□□□□ -1.24
Msh3-201ENSMUST00000022220 ApcQ61315 2845 aa7.3□□□□□ -1.24
Msh3-201ENSMUST00000022220 Krtap11-1E9Q2E9 183 aa7.3□□□□□ -1.24
Msh3-201ENSMUST00000022220 Gm5617Q91VN2 117 aa7.29□□□□□ -1.24
Msh3-201ENSMUST00000022220 Spata3Q9D9T6 193 aa7.29□□□□□ -1.24
Msh3-201ENSMUST00000022220 Cd164Q9R0L9 197 aa7.29□□□□□ -1.24
Msh3-201ENSMUST00000022220 1600014C23RikQ9DAX4 101 aa7.29□□□□□ -1.24
Msh3-201ENSMUST00000022220 Cmya5Q70KF4 3739 aa7.28□□□□□ -1.24
Msh3-201ENSMUST00000022220 Atox1O08997 68 aaKnown RBP7.28□□□□□ -1.24
Msh3-201ENSMUST00000022220 Gm17509Q9CZ61 145 aa7.28□□□□□ -1.24
Msh3-201ENSMUST00000022220 Gm10320E9PW43 113 aa7.27□□□□□ -1.25
Msh3-201ENSMUST00000022220 Coa6Q8BGD8 79 aa7.27□□□□□ -1.25
Msh3-201ENSMUST00000022220 Ighv2-2A0A075B5P8 116 aa7.25□□□□□ -1.25
Msh3-201ENSMUST00000022220 P01821 116 aa7.25□□□□□ -1.25
Msh3-201ENSMUST00000022220 Wfdc10Q3V2J9 124 aa7.25□□□□□ -1.25
Msh3-201ENSMUST00000022220 C530025M09RikF6RGA8 229 aa7.24□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms