RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Serp1Q9Z1W5 66 aa8.76□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Trav14-1A0A0G2JF94 121 aa8.76□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Gm9903Q8C9Y8 129 aa8.75□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Defb50Q6TU36 73 aa8.75□□□□□ -1.01
Clcn3-201ENSMUST00000004430 BaalcQ8VHV1 145 aa8.75□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Nsd1O88491 2588 aaKnown RBP8.75□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Gm10337F7DEP7 55 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Igkv8-21A0A140T8P7 120 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 6430550D23RikE9Q1X6 194 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 B9d2Q3UK10 175 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Obox2E9PXV9 151 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 1810062G17RikG3X8Y2 129 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 CrygeQ03740 174 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 4930519P11RikQ9CUJ8 166 aa8.74□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Krtap16-1A2A5X5 502 aa8.73□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Gm10570F6VB42 170 aa8.73□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Lypd5Q9D7Z7 256 aa8.73□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Stab1Q8R4Y4 2571 aa8.73□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Tex15F8VPN2 2785 aa8.73□□□□□ -1.01
Clcn3-201ENSMUST00000004430 A730009L09RikA0A1B0GS82 72 aa8.72□□□□□ -1.01
Clcn3-201ENSMUST00000004430 Fam229bQ8CF36 80 aa8.71□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Nf1Q04690 2841 aa8.7□□□□□ -1.02
Clcn3-201ENSMUST00000004430 A530084C06RikQ3UTW2 186 aa8.7□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Tep1P97499 2629 aa8.7□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Ighv2-9A0A075B5Q5 116 aa8.69□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Ube2aQ9Z255 152 aa8.69□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm3233E9Q2H5 230 aa8.69□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm10267M0QWD8 85 aa8.69□□□□□ -1.02
Clcn3-201ENSMUST00000004430 LrbaQ9ESE1 2856 aa8.68□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Atox1O08997 68 aaKnown RBP8.68□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Rps28P62858 69 aaKnown RBP8.68□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Sprr2jO70561 109 aa8.68□□□□□ -1.02
Clcn3-201ENSMUST00000004430 OtogO55225 2910 aa8.68□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm12353A2AGJ4 60 aa8.67□□□□□ -1.02
Clcn3-201ENSMUST00000004430 SptssbQ925E8 76 aa8.67□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm17509Q9CZ61 145 aa8.67□□□□□ -1.02
Clcn3-201ENSMUST00000004430 P01819 144 aa8.67□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Igkv3-5A0A140T8M6 119 aa8.66□□□□□ -1.02
Clcn3-201ENSMUST00000004430 2310034G01RikA0A286YDL3 209 aa8.66□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Tcl1b5P56845 121 aa8.66□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm10197F6QEY5 67 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm5617Q91VN2 117 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 UqcrqQ9CQ69 82 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 1700074P13RikQ9D9G7 251 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm10770F7D043 238 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Gm43218A0A0G2JGT0 114 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Pou2af1Q64693 256 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 Cystm1Q8K353 104 aa8.65□□□□□ -1.02
Clcn3-201ENSMUST00000004430 1700012A03RikQ9DAF1 130 aa8.65□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Gm10308Q9CVR5 141 aa8.64□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Igkv3-10A0A0G2JGN0 119 aa8.64□□□□□ -1.03
Clcn3-201ENSMUST00000004430 E130114P18RikF6S0S7 154 aa8.64□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Muc4Q8JZM8 3443 aa8.64□□□□□ -1.03
Clcn3-201ENSMUST00000004430 A0A286YE49 62 aa8.63□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Mast4Q811L6 2618 aa8.63□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Krtap11-1E9Q2E9 183 aa8.63□□□□□ -1.03
Clcn3-201ENSMUST00000004430 C530025M09RikF6RGA8 229 aa8.62□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Gm16485Q8C4B7 115 aa8.62□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Reg3aO09037 175 aa8.62□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Igsf10Q3V1M1 2594 aa8.62□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Csmd2V9GX34 3611 aa8.62□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Gm4707V9GXN5 68 aa8.62□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Gm44790A0A0N4SV91 103 aa8.61□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Krtap24-1G3X9A2 248 aa8.61□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Ighv8-13A0A075B5Y0 101 aa8.6□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Coa6Q8BGD8 79 aa8.6□□□□□ -1.03
Clcn3-201ENSMUST00000004430 H2al1bA0A087WP11 105 aa8.6□□□□□ -1.03
Clcn3-201ENSMUST00000004430 C130032M10RikQ8C888 123 aa8.6□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Ighv2-5A0A0A6YY69 116 aa8.6□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Mrpl34Q99N91 92 aa8.6□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Spint4Q9D263 159 aa8.6□□□□□ -1.03
Clcn3-201ENSMUST00000004430 Cox6a2P43023 97 aa8.59□□□□□ -1.03
Clcn3-201ENSMUST00000004430 1700018G05RikA0A1B0GSI2 66 aa8.58□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Ndufs5Q99LY9 106 aa8.58□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Nbeal2Q6ZQA0 2742 aa8.58□□□□□ -1.04
Clcn3-201ENSMUST00000004430 SycnQ8VCK7 134 aa8.58□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Igkv8-28A0A0G2JE47 121 aa8.57□□□□□ -1.04
Clcn3-201ENSMUST00000004430 PscaP57096 123 aa8.57□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Helz2E9QAM5 2947 aaKnown RBP8.57□□□□□ -1.04
Clcn3-201ENSMUST00000004430 A330070K13RikQ8CA53 115 aa8.56□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Gm10320E9PW43 113 aa8.56□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Elof1P60003 83 aa8.56□□□□□ -1.04
Clcn3-201ENSMUST00000004430 H2al1aQ5M8Q2 105 aa8.54□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Gm21886J3QJU9 214 aa8.54□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Snhg11Q4G0K9 87 aa8.54□□□□□ -1.04
Clcn3-201ENSMUST00000004430 AY074887Q8R5F9 132 aa8.54□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Wfdc10Q3V2J9 124 aa8.53□□□□□ -1.04
Clcn3-201ENSMUST00000004430 Defb13Q8R2I4 64 aa8.53□□□□□ -1.04
Clcn3-201ENSMUST00000004430 E130208F15RikQ3UPV3 143 aa8.52□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Fam168bQ80XQ8 194 aa8.51□□□□□ -1.05
Clcn3-201ENSMUST00000004430 H2al1eQ810S6 105 aa8.51□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Ighv2-2A0A075B5P8 116 aa8.51□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Gm28230A0A0A0MQ91 144 aa8.51□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Igkv3-12A0A140T8P0 119 aa8.51□□□□□ -1.05
Clcn3-201ENSMUST00000004430 P01821 116 aa8.51□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Igkv3-4A0A140T8Q4 119 aa8.49□□□□□ -1.05
Clcn3-201ENSMUST00000004430 CnbpP53996 178 aaKnown RBP8.49□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Rpl37aP61514 92 aa8.48□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Hivep1Q03172 2688 aa8.48□□□□□ -1.05
Clcn3-201ENSMUST00000004430 Col6a5A6H584 2640 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms