RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Defa3P28310 93 aa9.24□□□□□ -0.93
Ercc1-201ENSMUST00000003645 SelenowP63300 88 aa9.24□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Tac4Q99N14 128 aa9.24□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Rab37Q9JKM7 223 aa9.24□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Smim29Q8R043 75 aa9.23□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Phf5aP83870 110 aaKnown RBP9.22□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Dmac1Q9CQ00 111 aa9.22□□□□□ -0.93
Ercc1-201ENSMUST00000003645 Cox7cP17665 63 aa9.21□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Rpl28P41105 137 aaKnown RBP9.21□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Mrpl52Q9D0Y8 121 aa9.21□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Pkhd1E9PZ36 4059 aa9.2□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Fam104aA2A6P4 185 aa9.2□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Lgals4Q8K419 326 aa9.2□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Tax1bp3Q9DBG9 124 aa9.2□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Gm10770F7D043 238 aa9.19□□□□□ -0.94
Ercc1-201ENSMUST00000003645 BtcQ05928 177 aa9.19□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Q9DAA3 117 aa9.19□□□□□ -0.94
Ercc1-201ENSMUST00000003645 2310034G01RikA0A286YDL3 209 aa9.18□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Gm9805F6YK59 57 aa9.18□□□□□ -0.94
Ercc1-201ENSMUST00000003645 BC048502Q80Y74 154 aa9.18□□□□□ -0.94
Ercc1-201ENSMUST00000003645 ApobE9Q414 4505 aa9.17□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Ryr1E9PZQ0 5035 aa9.16□□□□□ -0.94
Ercc1-201ENSMUST00000003645 A0A286YCQ8 80 aa9.16□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Rpl32-psP17932 135 aa9.16□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Defa4P28311 92 aa9.16□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Defa13P50711 93 aa9.16□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Gm5142Q8C5X9 133 aa9.16□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Spata45Q9CVW4 97 aa9.16□□□□□ -0.94
Ercc1-201ENSMUST00000003645 NbdyA0A0N4SUI7 68 aa9.15□□□□□ -0.94
Ercc1-201ENSMUST00000003645 A330070K13RikQ8CA53 115 aa9.15□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Phpt1Q9DAK9 124 aa9.15□□□□□ -0.94
Ercc1-201ENSMUST00000003645 SacsQ9JLC8 4582 aa9.15□□□□□ -0.94
Ercc1-201ENSMUST00000003645 Cd164Q9R0L9 197 aa9.14□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Trav13n-2A0A0G2JF93 110 aa9.13□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Klk12B2RVZ0 247 aa9.13□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Defa7P50705 93 aa9.13□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Smim26Q3V460 107 aa9.13□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Gm11011D3Z3L9 86 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 6030445D17RikE9Q8F9 148 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Ube2bP63147 152 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Gm7276Q3TYW4 209 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 ScxQ64124 207 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Adm2Q7TNK8 150 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Defb29Q8BGW9 78 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Dnal4Q9DCM4 105 aa9.12□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Ccl25O35903 144 aa9.11□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Tnp2P11378 117 aa9.11□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Defb47Q30KN1 79 aa9.11□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Wfdc10Q3V2J9 124 aa9.1□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Q9DAA7 145 aa9.1□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Gm17521F6QAC8 156 aa9.09□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Krtap14O08640 167 aa9.09□□□□□ -0.95
Ercc1-201ENSMUST00000003645 CenpwQ3URR0 86 aa9.09□□□□□ -0.95
Ercc1-201ENSMUST00000003645 Gm10320E9PW43 113 aa9.08□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Gm10570F6VB42 170 aa9.08□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Elof1P60003 83 aa9.07□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Spink13Q3UTS8 97 aa9.07□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Ighv10-1A0A0B4J1J6 119 aa9.06□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Igkv4-58A0A0G2JGI6 119 aa9.06□□□□□ -0.96
Ercc1-201ENSMUST00000003645 E130218I03RikA0A0U1RNU5 63 aa9.06□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Trav3-4A0A075B654 114 aa9.05□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Gm29423A0A087WRM1 55 aa9.05□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Gm16381A0A1Y7VKT9 73 aa9.05□□□□□ -0.96
Ercc1-201ENSMUST00000003645 MturnQ8CGA4 131 aa9.04□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Xlr5cQ9JJR2 179 aa9.04□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Gm28051J3QMA2 81 aa9.03□□□□□ -0.96
Ercc1-201ENSMUST00000003645 5730596B20RikQ8BQ08 205 aa9.03□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Q8K1L6 76 aa9.03□□□□□ -0.96
Ercc1-201ENSMUST00000003645 Msrb1Q9JLC3 116 aa9.03□□□□□ -0.96
Ercc1-201ENSMUST00000003645 TeppQ6IMH0 216 aa9.02□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Gm10642Q3TWM1 71 aa9.01□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Fam19a3Q7TPG6 132 aa9.01□□□□□ -0.97
Ercc1-201ENSMUST00000003645 LbhQ9CX60 105 aa9.01□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Igkv1-35A0A0G2JDE5 120 aa9□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Gm10135F6TEE5 83 aa9□□□□□ -0.97
Ercc1-201ENSMUST00000003645 AI606181Q8C7B9 129 aa9□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Rpl39lQ9CQD0 51 aa9□□□□□ -0.97
Ercc1-201ENSMUST00000003645 A930002H24RikQ8C8Y3 163 aa8.99□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Cox6cQ9CPQ1 76 aa8.99□□□□□ -0.97
Ercc1-201ENSMUST00000003645 NrepQ07475 68 aa8.99□□□□□ -0.97
Ercc1-201ENSMUST00000003645 D130052B06RikQ3UW13 202 aa8.99□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Gm27235Q3UW50 83 aa8.99□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Gm26602M0QWA4 95 aa8.98□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Vpreb2P13373 142 aa8.98□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Ube2aQ9Z255 152 aa8.98□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Pkhd1l1Q80ZA4 4249 aa8.97□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Lrp1bQ9JI18 4599 aa8.97□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Igkv3-7A0A0G2JE31 119 aa8.97□□□□□ -0.97
Ercc1-201ENSMUST00000003645 Gm10139O88245 57 aa8.97□□□□□ -0.97
Ercc1-201ENSMUST00000003645 4930524J08RikQ9CUJ5 163 aa8.96□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Hectd4E9Q2E4 4418 aa8.95□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Defb37Q7TMD2 62 aa8.95□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Kmt2cQ8BRH4 4903 aa8.94□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Igkv1-110A0A0B4J1I0 119 aa8.94□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Rpl37aP61514 92 aa8.94□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Igkv1-122A0A140T8M9 119 aa8.93□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Sigmar1O55242 223 aa8.93□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Hint1P70349 126 aaKnown RBP8.93□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Dnah8Q91XQ0 4731 aa8.92□□□□□ -0.98
Ercc1-201ENSMUST00000003645 Tmem243B2RVB9 118 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms