RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Ufsp1Q9CZP0 217 aa11.99□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Gnb1lQ9EQ15 326 aa11.99□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Gm44965A0A0N4SVR3 59 aa11.98□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Gm10295Q8CCF3 114 aa11.98□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Trav9d-4A0A0G2JG37 103 aa11.97□□□□□ -0.49
Scn1b-203ENSMUST00000211945 A0A286YCN5 57 aa11.97□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Krtap29-1A2A5X4 342 aa11.97□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Gm6812B1AXU1 112 aa11.97□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Hbb-b2P02089 147 aa11.97□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Gm28269A0A087WSG3 125 aa11.96□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Ssbp1Q9CYR0 152 aaKnown RBP11.96□□□□□ -0.49
Scn1b-203ENSMUST00000211945 Gm35549A0A0N4SUS7 141 aa11.96□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Igkv8-16A0A0G2JDG9 121 aa11.94□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Tex54G3UW99 86 aa11.94□□□□□ -0.5
Scn1b-203ENSMUST00000211945 4930544G11RikQ9CR99 193 aa11.94□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Dpm2Q9Z324 84 aa11.94□□□□□ -0.5
Scn1b-203ENSMUST00000211945 1700011M02RikB1AX35 88 aa11.93□□□□□ -0.5
Scn1b-203ENSMUST00000211945 1700010B08RikQ9DAI7 102 aa11.93□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Defa23Q5G866 93 aa11.92□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Zcchc13Q9D548 170 aa11.92□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Triap1Q9D8Z2 76 aa11.92□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Wfdc12Q9JHY3 85 aa11.92□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Gm29289A0A087WPY7 166 aa11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Scgb1b19F6WYW0 93 aa11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Smim1P0C8K7 78 aa11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Gpr15lA0A0B4J1N3 78 aa11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Gm45753A0A1C7CYU8 86 aa11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Gm26727M0QWT1 121 aa11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 MifP34884 115 aaKnown RBP11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Znf414Q9DCK4 299 aa11.91□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Trav13-2A0A075B649 110 aa11.9□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Fam104aA2A6P4 185 aa11.9□□□□□ -0.5
Scn1b-203ENSMUST00000211945 Timm17bQ9Z0V7 172 aa11.89□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Wfdc6bF6ULY1 148 aa11.88□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Gm10518F6UQQ9 182 aa11.88□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Ntn5Q3UQ22 452 aa11.88□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Ube2d4D3YUH6 135 aa11.87□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Defa27F2Z403 93 aa11.87□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Sostdc1Q9CQN4 206 aa11.87□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Defb45Q3V490 66 aa11.86□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Gm10577Q3UDV9 132 aa11.86□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Pfn2Q9JJV2 140 aa11.86□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Scgb1b15A0A087WP50 93 aa11.85□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Tnp2P11378 117 aa11.85□□□□□ -0.51
Scn1b-203ENSMUST00000211945 1600014C23RikQ9DAX4 101 aa11.85□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Trav4d-3A0A075B625 110 aa11.84□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Prol1E9PYQ4 312 aa11.84□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Fam168bQ80XQ8 194 aa11.84□□□□□ -0.51
Scn1b-203ENSMUST00000211945 Herc2Q4U2R1 4836 aa11.84□□□□□ -0.51
Scn1b-203ENSMUST00000211945 C920008G01RikA0A0B4J1N1 112 aa11.83□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Reg3dQ9QUS9 175 aa11.83□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Tcl1b3P56842 122 aa11.82□□□□□ -0.52
Scn1b-203ENSMUST00000211945 ScxQ64124 207 aa11.81□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Obox2E9PXV9 151 aa11.81□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Plscr4P58196 326 aa11.81□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Ighv2-2A0A075B5P8 116 aa11.8□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Ighv2-5A0A0A6YY69 116 aa11.8□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Vamp8O70404 101 aa11.8□□□□□ -0.52
Scn1b-203ENSMUST00000211945 P01821 116 aa11.8□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Uqcc3Q8K2T4 89 aa11.8□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Tal2Q62282 108 aa11.79□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Fam19a1Q7TPG8 133 aa11.79□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Defb9Q8R2I6 67 aa11.79□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Pkhd1l1Q80ZA4 4249 aa11.79□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Dnah8Q91XQ0 4731 aa11.78□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Cops9Q3U898 57 aa11.78□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Try10Q792Z1 246 aaKnown RBP11.78□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Rpl24Q8BP67 157 aaKnown RBP11.78□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Vps13bQ80TY5 3993 aa11.78□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Pglyrp4Q0VB07 374 aa11.77□□□□□ -0.52
Scn1b-203ENSMUST00000211945 Glrp1E9Q9S8 174 aa11.76□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Cox7bP56393 80 aa11.76□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Fam19a5Q91WE9 132 aa11.76□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Birc6O88738 4882 aa11.76□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Gm10845Q3UNY9 185 aa11.76□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Kmt2cQ8BRH4 4903 aa11.76□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Csdc2Q91YQ3 154 aa11.75□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Gm11020F6ZGD5 61 aa11.74□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Defa3P28310 93 aa11.73□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Wdr38Q9D994 303 aa11.73□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Slamf6Q9ET39 351 aa11.73□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Igkv8-18A0A0B4J1J3 123 aa11.72□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Ccl17F6R5P4 103 aa11.72□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Phf5aP83870 110 aaKnown RBP11.72□□□□□ -0.53
Scn1b-203ENSMUST00000211945 P84750 121 aa11.72□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Lce1mQ9CR91 182 aa11.72□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Hectd4E9Q2E4 4418 aa11.72□□□□□ -0.53
Scn1b-203ENSMUST00000211945 Rpl28P41105 137 aaKnown RBP11.71□□□□□ -0.53
Scn1b-203ENSMUST00000211945 4930415O20RikQ8CDT5 131 aa11.7□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Lage3Q9CR70 148 aa11.7□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Ighv1-62-2A0A0A6YXZ4 119 aa11.7□□□□□ -0.54
Scn1b-203ENSMUST00000211945 NbdyA0A0N4SUI7 68 aa11.7□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Lst1O08843 95 aa11.7□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Cdk2ap2Q9CPY4 127 aa11.7□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Igkv1-88A0A140T8N1 120 aa11.69□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Rpl18aP62717 176 aaKnown RBP11.69□□□□□ -0.54
Scn1b-203ENSMUST00000211945 A330070K13RikQ8CA53 115 aa11.69□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Inafm2A0A1L1STD6 152 aa11.67□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Gm6793B2RXM2 351 aa11.67□□□□□ -0.54
Scn1b-203ENSMUST00000211945 MalO09198 153 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms