RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Ndufs7Q9DC70 224 aa5.2□□□□□ -1.58
Chm-202ENSMUST00000113388 AcanQ61282 2132 aaKnown RBP5.2□□□□□ -1.58
Chm-202ENSMUST00000113388 Cdk2ap2Q9CPY4 127 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 Trav9d-3A0A075B695 113 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 Igkv3-3A0A140T8Q0 119 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm12216A0A1W2P827 62 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 P01755 137 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 Ank2Q8C8R3 3898 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv10-1A0A0B4J1J6 119 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 Ly6gP35461 111 aa5.19□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm3233E9Q2H5 230 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Prp2P05143 317 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm10577Q3UDV9 132 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Gphb5Q812B2 130 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm26620Q9CY65 116 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Stab1Q8R4Y4 2571 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Igkv4-78A0A0A6YYE5 119 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm10160F6Y577 67 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 TshbP12656 138 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Lmo4P61969 165 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv1-5A0A0A6YWG2 117 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm10542F6XDR3 90 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Itpr2Q9Z329 2701 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 B430305J03RikQ8BQQ8 176 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 9130230L23RikQ8CC80 163 aa5.18□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv2-3A0A075B696 115 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv1-31A0A0A6YWK5 117 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Reg3gO09049 174 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 4930519P11RikQ9CUJ8 166 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Znf580Q9DB38 172 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm11565A2A4M7 156 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv2-6-8A0A0A6YWY9 116 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv1-82A0A0G2JEU7 117 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Defb26Q30KN7 186 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 EpopQ7TNS8 369 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 E130116L18RikQ8BMV6 101 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 Spag11Q8K4N2 71 aa5.17□□□□□ -1.58
Chm-202ENSMUST00000113388 P01823 113 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 Gm10845Q3UNY9 185 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 CubnQ9JLB4 3623 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 1700011M02RikB1AX35 88 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv1-80A0A075B5Y3 117 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 Mp68P56379 58 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 Polr2kQ63871 58 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 Cox7b2Q9D2H1 82 aa5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 Fn1P11276 2477 aaKnown RBP5.16□□□□□ -1.58
Chm-202ENSMUST00000113388 Trav9-2A0A075B647 113 aa5.15□□□□□ -1.58
Chm-202ENSMUST00000113388 Trav9n-2A0A0G2JDP3 113 aa5.15□□□□□ -1.58
Chm-202ENSMUST00000113388 Spint3Q3UW09 88 aa5.15□□□□□ -1.58
Chm-202ENSMUST00000113388 Higd2aQ9CQJ1 106 aa5.15□□□□□ -1.58
Chm-202ENSMUST00000113388 Tex15F8VPN2 2785 aa5.15□□□□□ -1.58
Chm-202ENSMUST00000113388 Brwd1Q921C3 2304 aa5.15□□□□□ -1.58
Chm-202ENSMUST00000113388 6430550D23RikE9Q1X6 194 aa5.15□□□□□ -1.58
Chm-202ENSMUST00000113388 Ighv1-12A0A0A6YXJ9 117 aa5.15□□□□□ -1.59
Chm-202ENSMUST00000113388 Gm10308Q9CVR5 141 aa5.15□□□□□ -1.59
Chm-202ENSMUST00000113388 Ighv1-59A0A0A6YXE0 117 aa5.15□□□□□ -1.59
Chm-202ENSMUST00000113388 A0A286YE49 62 aa5.15□□□□□ -1.59
Chm-202ENSMUST00000113388 Cela2aP05208 271 aa5.15□□□□□ -1.59
Chm-202ENSMUST00000113388 Gm9949Q8C9F4 104 aa5.15□□□□□ -1.59
Chm-202ENSMUST00000113388 Fbn1Q61554 2873 aaKnown RBP5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Gm10647E9Q8X0 124 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Q08AU9 97 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Ighv10-3A0A075B5T6 119 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Vpreb3D3Z6J4 130 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Gm8439G3UWA7 96 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 B9d2Q3UK10 175 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Cystm1Q8K353 104 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Tomm7Q9D173 55 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 BsnO88737 3942 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Igkv8-16A0A0G2JDG9 121 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Tfpi2O35536 230 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Fam229bQ8CF36 80 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Gm10549Q3URY4 149 aa5.14□□□□□ -1.59
Chm-202ENSMUST00000113388 Phxr4P15974 95 aa5.13□□□□□ -1.59
Chm-202ENSMUST00000113388 Hivep3A2A884 2348 aa5.12□□□□□ -1.59
Chm-202ENSMUST00000113388 Gm17577J3QNF7 156 aa5.12□□□□□ -1.59
Chm-202ENSMUST00000113388 Atp6v0e1Q9CQD8 81 aa5.12□□□□□ -1.59
Chm-202ENSMUST00000113388 Igkv4-79A0A075B5L8 119 aa5.12□□□□□ -1.59
Chm-202ENSMUST00000113388 Igkv8-21A0A140T8P7 120 aa5.12□□□□□ -1.59
Chm-202ENSMUST00000113388 Q9DAA7 145 aa5.12□□□□□ -1.59
Chm-202ENSMUST00000113388 Notch3Q61982 2318 aa5.12□□□□□ -1.59
Chm-202ENSMUST00000113388 Ighv1-56A0A0A6YXG2 117 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 BC025920Q3US60 128 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 Lynx1P0DP60 116 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 Zfand3Q497H0 227 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 Coa5Q99M07 74 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 Eif4ebp3Q80VV3 101 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 Igkv1-122A0A140T8M9 119 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 Odf1Q61999 247 aa5.11□□□□□ -1.59
Chm-202ENSMUST00000113388 9530003J23RikQ8BM26 151 aa5.1□□□□□ -1.59
Chm-202ENSMUST00000113388 Gm5142Q8C5X9 133 aa5.1□□□□□ -1.59
Chm-202ENSMUST00000113388 P01786 117 aa5.1□□□□□ -1.59
Chm-202ENSMUST00000113388 Nbeal2Q6ZQA0 2742 aa5.1□□□□□ -1.59
Chm-202ENSMUST00000113388 Wfdc10Q3V2J9 124 aa5.09□□□□□ -1.59
Chm-202ENSMUST00000113388 Igkv8-24A0A140T8P5 121 aa5.09□□□□□ -1.59
Chm-202ENSMUST00000113388 Odf3l2Q3TZ65 277 aa5.09□□□□□ -1.59
Chm-202ENSMUST00000113388 NipblQ6KCD5 2798 aaKnown RBP5.09□□□□□ -1.59
Chm-202ENSMUST00000113388 4930546C10RikE9Q4Y3 121 aa5.09□□□□□ -1.59
Chm-202ENSMUST00000113388 OxtP35454 125 aa5.09□□□□□ -1.6
Chm-202ENSMUST00000113388 Cox17P56394 63 aa5.09□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms