RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Igkv2-109A0A075B5K6 120 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Erdr1J3QMM0 206 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Tmem254aP0DN89 123 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Tmem254bP0DN90 123 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Tmem254cP0DN91 123 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Cox7bP56393 80 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Ighv2-9A0A075B5Q5 116 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Ighv10-3A0A075B5T6 119 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 Klk12B2RVZ0 247 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 A830031A19RikQ8BNT5 113 aa8.81□□□□□ -1
Nup88-203ENSMUST00000108531 CnbpP53996 178 aaKnown RBP8.8□□□□□ -1
Nup88-203ENSMUST00000108531 Tcl1b5P56845 121 aa8.8□□□□□ -1
Nup88-203ENSMUST00000108531 Cmc4Q61908 68 aa8.8□□□□□ -1
Nup88-203ENSMUST00000108531 4930556J24RikQ9D4U7 146 aa8.8□□□□□ -1
Nup88-203ENSMUST00000108531 D730001G18RikA0A087WQU7 115 aa8.8□□□□□ -1
Nup88-203ENSMUST00000108531 Gm10518F6UQQ9 182 aa8.8□□□□□ -1
Nup88-203ENSMUST00000108531 Dad1P61804 113 aa8.8□□□□□ -1
Nup88-203ENSMUST00000108531 Gm9903Q8C9Y8 129 aa8.79□□□□□ -1
Nup88-203ENSMUST00000108531 Cystm1Q8K353 104 aa8.79□□□□□ -1
Nup88-203ENSMUST00000108531 CrygfQ9CXV3 174 aa8.79□□□□□ -1
Nup88-203ENSMUST00000108531 Mast4Q811L6 2618 aa8.79□□□□□ -1
Nup88-203ENSMUST00000108531 Igkv8-16A0A0G2JDG9 121 aa8.78□□□□□ -1
Nup88-203ENSMUST00000108531 Gm3618D3Z4P5 127 aa8.78□□□□□ -1
Nup88-203ENSMUST00000108531 CrygdP04342 174 aa8.78□□□□□ -1
Nup88-203ENSMUST00000108531 CrygeQ03740 174 aa8.78□□□□□ -1
Nup88-203ENSMUST00000108531 Gm2916Q9D9B9 127 aa8.78□□□□□ -1
Nup88-203ENSMUST00000108531 Igkv8-24A0A140T8P5 121 aa8.78□□□□□ -1
Nup88-203ENSMUST00000108531 Gm10320E9PW43 113 aa8.77□□□□□ -1.01
Nup88-203ENSMUST00000108531 Ormdl1Q921I0 153 aa8.77□□□□□ -1.01
Nup88-203ENSMUST00000108531 Krtap11-1E9Q2E9 183 aa8.77□□□□□ -1.01
Nup88-203ENSMUST00000108531 Gm10308Q9CVR5 141 aa8.77□□□□□ -1.01
Nup88-203ENSMUST00000108531 Reg3dQ9QUS9 175 aa8.77□□□□□ -1.01
Nup88-203ENSMUST00000108531 Gm20726G3UX18 150 aa8.76□□□□□ -1.01
Nup88-203ENSMUST00000108531 E130208F15RikQ3UPV3 143 aa8.76□□□□□ -1.01
Nup88-203ENSMUST00000108531 Serp2Q6TAW2 65 aa8.76□□□□□ -1.01
Nup88-203ENSMUST00000108531 Wfdc12Q9JHY3 85 aa8.76□□□□□ -1.01
Nup88-203ENSMUST00000108531 TrrapQ80YV3 2565 aaKnown RBP8.76□□□□□ -1.01
Nup88-203ENSMUST00000108531 Igkv8-26A0A075B5N5 123 aa8.76□□□□□ -1.01
Nup88-203ENSMUST00000108531 Gm9805F6YK59 57 aa8.76□□□□□ -1.01
Nup88-203ENSMUST00000108531 Igkv8-21A0A140T8P7 120 aa8.75□□□□□ -1.01
Nup88-203ENSMUST00000108531 Higd2aQ9CQJ1 106 aa8.75□□□□□ -1.01
Nup88-203ENSMUST00000108531 Ighv10-1A0A0B4J1J6 119 aa8.75□□□□□ -1.01
Nup88-203ENSMUST00000108531 Igkv8-27A0A0G2JF28 120 aa8.75□□□□□ -1.01
Nup88-203ENSMUST00000108531 Igkv8-30A0A140T8M3 121 aa8.75□□□□□ -1.01
Nup88-203ENSMUST00000108531 Ube2d4D3YUH6 135 aa8.75□□□□□ -1.01
Nup88-203ENSMUST00000108531 4930535I16RikQ9CUI2 172 aa8.74□□□□□ -1.01
Nup88-203ENSMUST00000108531 Mrpl52Q9D0Y8 121 aa8.74□□□□□ -1.01
Nup88-203ENSMUST00000108531 Igkv4-58A0A0G2JGI6 119 aa8.74□□□□□ -1.01
Nup88-203ENSMUST00000108531 Defa7P50705 93 aa8.73□□□□□ -1.01
Nup88-203ENSMUST00000108531 Inafm2A0A1L1STD6 152 aa8.73□□□□□ -1.01
Nup88-203ENSMUST00000108531 Gm3250E9Q1M3 230 aa8.73□□□□□ -1.01
Nup88-203ENSMUST00000108531 Brwd1Q921C3 2304 aa8.73□□□□□ -1.01
Nup88-203ENSMUST00000108531 Ubl5Q9EPV8 73 aa8.72□□□□□ -1.01
Nup88-203ENSMUST00000108531 4930518I15RikQ3V2W7 57 aa8.72□□□□□ -1.01
Nup88-203ENSMUST00000108531 Defa20Q45VN2 95 aa8.71□□□□□ -1.01
Nup88-203ENSMUST00000108531 Naa38Q9D2U5 125 aa8.71□□□□□ -1.01
Nup88-203ENSMUST00000108531 Igkv3-1A0A075B5P1 119 aa8.71□□□□□ -1.02
Nup88-203ENSMUST00000108531 Ighv8-13A0A075B5Y0 101 aa8.71□□□□□ -1.02
Nup88-203ENSMUST00000108531 Gm10770F7D043 238 aa8.71□□□□□ -1.02
Nup88-203ENSMUST00000108531 Gm11213A0A1B0GR83 88 aa8.7□□□□□ -1.02
Nup88-203ENSMUST00000108531 Tmem243B2RVB9 118 aa8.7□□□□□ -1.02
Nup88-203ENSMUST00000108531 EnhoQ8K1D8 76 aa8.7□□□□□ -1.02
Nup88-203ENSMUST00000108531 Fam19a1Q7TPG8 133 aa8.7□□□□□ -1.02
Nup88-203ENSMUST00000108531 AY074887Q8R5F9 132 aa8.7□□□□□ -1.02
Nup88-203ENSMUST00000108531 Ighv2-5A0A0A6YY69 116 aa8.69□□□□□ -1.02
Nup88-203ENSMUST00000108531 Lamtor3O88653 124 aa8.69□□□□□ -1.02
Nup88-203ENSMUST00000108531 Defa21Q8C1P2 93 aa8.68□□□□□ -1.02
Nup88-203ENSMUST00000108531 Setd2E9Q5F9 2537 aa8.68□□□□□ -1.02
Nup88-203ENSMUST00000108531 MplkipQ9D011 178 aa8.68□□□□□ -1.02
Nup88-203ENSMUST00000108531 E130218I03RikA0A0U1RNU5 63 aa8.67□□□□□ -1.02
Nup88-203ENSMUST00000108531 Hivep3A2A884 2348 aa8.67□□□□□ -1.02
Nup88-203ENSMUST00000108531 Tmem258P61166 79 aa8.67□□□□□ -1.02
Nup88-203ENSMUST00000108531 Gm17509Q9CZ61 145 aa8.67□□□□□ -1.02
Nup88-203ENSMUST00000108531 Msrb1Q9JLC3 116 aa8.67□□□□□ -1.02
Nup88-203ENSMUST00000108531 Myo18bE9PV66 2605 aa8.67□□□□□ -1.02
Nup88-203ENSMUST00000108531 Gm3233E9Q2H5 230 aa8.66□□□□□ -1.02
Nup88-203ENSMUST00000108531 9530003J23RikQ8BM26 151 aa8.66□□□□□ -1.02
Nup88-203ENSMUST00000108531 Defa4P28311 92 aa8.66□□□□□ -1.02
Nup88-203ENSMUST00000108531 Igkv4-92A0A0B4J1I2 117 aa8.65□□□□□ -1.02
Nup88-203ENSMUST00000108531 2310034G01RikA0A286YDL3 209 aa8.64□□□□□ -1.03
Nup88-203ENSMUST00000108531 9430015G10RikA2ASP7 199 aa8.64□□□□□ -1.03
Nup88-203ENSMUST00000108531 E130114P18RikF6S0S7 154 aa8.64□□□□□ -1.03
Nup88-203ENSMUST00000108531 GhrhP16043 103 aa8.64□□□□□ -1.03
Nup88-203ENSMUST00000108531 Cox7b2Q9D2H1 82 aa8.64□□□□□ -1.03
Nup88-203ENSMUST00000108531 Ufsp1Q9CZP0 217 aa8.63□□□□□ -1.03
Nup88-203ENSMUST00000108531 Ighv13-2A0A0A6YWN3 119 aa8.63□□□□□ -1.03
Nup88-203ENSMUST00000108531 Rbm3O89086 153 aaKnown RBP8.63□□□□□ -1.03
Nup88-203ENSMUST00000108531 Pde6gP09174 87 aa8.63□□□□□ -1.03
Nup88-203ENSMUST00000108531 Rps28P62858 69 aaKnown RBP8.63□□□□□ -1.03
Nup88-203ENSMUST00000108531 Gm19935A0A1B0GSF9 52 aa8.62□□□□□ -1.03
Nup88-203ENSMUST00000108531 Snhg11Q4G0K9 87 aa8.62□□□□□ -1.03
Nup88-203ENSMUST00000108531 Igkv8-34A0A0G2JDU0 121 aa8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 Gm17577J3QNF7 156 aa8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 Defa23Q5G866 93 aa8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 Hspg2Q05793 3707 aaKnown RBP8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 A730009L09RikA0A1B0GS82 72 aa8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 A0A286YCN5 57 aa8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 BC048502Q80Y74 154 aa8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 Fam229bQ8CF36 80 aa8.61□□□□□ -1.03
Nup88-203ENSMUST00000108531 Elof1P60003 83 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms